Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_K09
(251 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ010646-1|CAA09303.1| 1237|Caenorhabditis elegans calcium ATPas... 64 1e-11
AC025724-13|AAK68551.1| 1234|Caenorhabditis elegans Membrane cal... 64 1e-11
AC025724-11|AAM97979.1| 1137|Caenorhabditis elegans Membrane cal... 61 1e-10
AJ010708-1|CAA09308.1| 1158|Caenorhabditis elegans calcium ATPas... 51 1e-07
AF125446-4|AAD12806.2| 1158|Caenorhabditis elegans Hypothetical ... 51 1e-07
AC025724-12|AAK68550.1| 1160|Caenorhabditis elegans Membrane cal... 39 5e-04
Z99271-4|CAB16474.1| 105|Caenorhabditis elegans Hypothetical pr... 32 0.047
AL021480-5|CAJ21557.1| 432|Caenorhabditis elegans Hypothetical ... 32 0.062
AL021480-4|CAA16329.2| 431|Caenorhabditis elegans Hypothetical ... 32 0.062
Z68221-3|CAA92495.1| 1249|Caenorhabditis elegans Hypothetical pr... 31 0.14
Z68221-2|CAD59229.1| 1228|Caenorhabditis elegans Hypothetical pr... 31 0.14
Z68221-1|CAB61039.2| 1252|Caenorhabditis elegans Hypothetical pr... 31 0.14
AY438645-1|AAR00672.1| 1249|Caenorhabditis elegans membrane Calc... 31 0.14
AY438644-1|AAR00671.1| 1252|Caenorhabditis elegans membrane Calc... 31 0.14
AJ223616-1|CAA11491.1| 1228|Caenorhabditis elegans calcium ATPas... 31 0.14
AY818713-1|AAX35669.1| 691|Caenorhabditis elegans LIN-65S protein. 29 0.33
AY818712-1|AAX35668.1| 728|Caenorhabditis elegans LIN-65L protein. 29 0.33
AC025726-22|AAN73851.2| 512|Caenorhabditis elegans Abnormal cel... 29 0.33
AC025726-21|AAK73935.3| 728|Caenorhabditis elegans Abnormal cel... 29 0.33
U00048-6|AAB53828.1| 873|Caenorhabditis elegans Hypothetical pr... 27 1.3
Z54284-1|CAA91059.1| 2198|Caenorhabditis elegans Hypothetical pr... 27 2.3
Z98866-21|CAD56612.1| 743|Caenorhabditis elegans Hypothetical p... 26 3.1
Z98866-20|CAB11567.1| 734|Caenorhabditis elegans Hypothetical p... 26 3.1
AL132898-11|CAB60945.4| 552|Caenorhabditis elegans Hypothetical... 26 3.1
U55854-5|AAA98014.1| 103|Caenorhabditis elegans Hypothetical pr... 25 5.4
Z99942-8|CAC70091.2| 439|Caenorhabditis elegans Hypothetical pr... 25 7.1
Z99942-2|CAB17072.1| 468|Caenorhabditis elegans Hypothetical pr... 25 7.1
Z82060-6|CAB04887.1| 301|Caenorhabditis elegans Hypothetical pr... 25 9.4
>AJ010646-1|CAA09303.1| 1237|Caenorhabditis elegans calcium ATPase
protein.
Length = 1237
Score = 64.1 bits (149), Expect = 1e-11
Identities = 30/47 (63%), Positives = 39/47 (82%), Gaps = 3/47 (6%)
Frame = +1
Query: 16 RAGQILWIRGLTRLQTQLRVVRAFKSTLEDLEER---LSSHSAAELR 147
R+GQILW+RGLTRLQTQLRVV+AF+S+LE+ +ER S+HS +R
Sbjct: 1064 RSGQILWVRGLTRLQTQLRVVKAFRSSLEEFDERRSIASTHSVQSMR 1110
>AC025724-13|AAK68551.1| 1234|Caenorhabditis elegans Membrane calcium
atpase protein3, isoform b protein.
Length = 1234
Score = 64.1 bits (149), Expect = 1e-11
Identities = 30/47 (63%), Positives = 39/47 (82%), Gaps = 3/47 (6%)
Frame = +1
Query: 16 RAGQILWIRGLTRLQTQLRVVRAFKSTLEDLEER---LSSHSAAELR 147
R+GQILW+RGLTRLQTQLRVV+AF+S+LE+ +ER S+HS +R
Sbjct: 1064 RSGQILWVRGLTRLQTQLRVVKAFRSSLEEFDERRSIASTHSVQSMR 1110
>AC025724-11|AAM97979.1| 1137|Caenorhabditis elegans Membrane calcium
atpase protein3, isoform c protein.
Length = 1137
Score = 60.9 bits (141), Expect = 1e-10
Identities = 28/44 (63%), Positives = 36/44 (81%)
Frame = +1
Query: 16 RAGQILWIRGLTRLQTQLRVVRAFKSTLEDLEERLSSHSAAELR 147
R+GQILW+RGLTRLQTQ+RVV+AF++ L+ E L+ SAA LR
Sbjct: 1064 RSGQILWVRGLTRLQTQIRVVKAFQAGLDRREPSLTGQSAARLR 1107
>AJ010708-1|CAA09308.1| 1158|Caenorhabditis elegans calcium ATPase
protein.
Length = 1158
Score = 50.8 bits (116), Expect = 1e-07
Identities = 26/49 (53%), Positives = 35/49 (71%), Gaps = 1/49 (2%)
Frame = +1
Query: 16 RAGQILWIRGLTRLQTQLRVVRAFKSTLEDLE-ERLSSHSAAELRSRLR 159
RAGQ LW+ GLTRLQTQ+RVV+AF+S +D L++ +A LR+ R
Sbjct: 1071 RAGQSLWLLGLTRLQTQIRVVKAFQSVNDDSHPNSLTTSTADRLRASYR 1119
>AF125446-4|AAD12806.2| 1158|Caenorhabditis elegans Hypothetical
protein R05C11.3 protein.
Length = 1158
Score = 50.8 bits (116), Expect = 1e-07
Identities = 26/49 (53%), Positives = 35/49 (71%), Gaps = 1/49 (2%)
Frame = +1
Query: 16 RAGQILWIRGLTRLQTQLRVVRAFKSTLEDLE-ERLSSHSAAELRSRLR 159
RAGQ LW+ GLTRLQTQ+RVV+AF+S +D L++ +A LR+ R
Sbjct: 1071 RAGQSLWLLGLTRLQTQIRVVKAFQSVNDDSHPNSLTTSTADRLRASYR 1119
>AC025724-12|AAK68550.1| 1160|Caenorhabditis elegans Membrane calcium
atpase protein3, isoform a protein.
Length = 1160
Score = 38.7 bits (86), Expect = 5e-04
Identities = 28/67 (41%), Positives = 36/67 (53%), Gaps = 23/67 (34%)
Frame = +1
Query: 16 RAGQILWIRGLTRLQTQ-----------------------LRVVRAFKSTLEDLEERLSS 126
R+GQILW+RGLTRLQTQ +RVV+AF++ L+ E L+
Sbjct: 1064 RSGQILWVRGLTRLQTQVIGGERSDHLIPVPLSSAPTDQAIRVVKAFQAGLDRREPSLTG 1123
Query: 127 HSAAELR 147
SAA LR
Sbjct: 1124 QSAARLR 1130
>Z99271-4|CAB16474.1| 105|Caenorhabditis elegans Hypothetical
protein Y43F4A.4 protein.
Length = 105
Score = 32.3 bits (70), Expect = 0.047
Identities = 18/55 (32%), Positives = 29/55 (52%)
Frame = +1
Query: 40 RGLTRLQTQLRVVRAFKSTLEDLEERLSSHSAAELRSRLRAPPQDIAYIDADDVP 204
R L ++ VR+ ST+E RLS +S+ L R+ A + + ++ADD P
Sbjct: 3 RALLNASRRVATVRSTVSTVEGDAFRLSDYSSKYLGHRIAAFTEKLEIVNADDTP 57
>AL021480-5|CAJ21557.1| 432|Caenorhabditis elegans Hypothetical
protein Y39E4A.3b protein.
Length = 432
Score = 31.9 bits (69), Expect = 0.062
Identities = 18/55 (32%), Positives = 28/55 (50%)
Frame = +1
Query: 40 RGLTRLQTQLRVVRAFKSTLEDLEERLSSHSAAELRSRLRAPPQDIAYIDADDVP 204
R L ++ VR+ ST+E RLS +S+ L R A + + ++ADD P
Sbjct: 4 RALLNASRRVATVRSMASTVEGDAFRLSEYSSKYLGHRKAAFTEKLEIVNADDTP 58
>AL021480-4|CAA16329.2| 431|Caenorhabditis elegans Hypothetical
protein Y39E4A.3a protein.
Length = 431
Score = 31.9 bits (69), Expect = 0.062
Identities = 18/55 (32%), Positives = 28/55 (50%)
Frame = +1
Query: 40 RGLTRLQTQLRVVRAFKSTLEDLEERLSSHSAAELRSRLRAPPQDIAYIDADDVP 204
R L ++ VR+ ST+E RLS +S+ L R A + + ++ADD P
Sbjct: 3 RALLNASRRVATVRSMASTVEGDAFRLSEYSSKYLGHRKAAFTEKLEIVNADDTP 57
>Z68221-3|CAA92495.1| 1249|Caenorhabditis elegans Hypothetical protein
W09C2.3c protein.
Length = 1249
Score = 30.7 bits (66), Expect = 0.14
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +1
Query: 16 RAGQILWIRGLTRLQTQLRVVRAF 87
R+G+ LW+RG+ + LRV+RAF
Sbjct: 1123 RSGKSLWVRGMFIIGNHLRVLRAF 1146
>Z68221-2|CAD59229.1| 1228|Caenorhabditis elegans Hypothetical protein
W09C2.3b protein.
Length = 1228
Score = 30.7 bits (66), Expect = 0.14
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +1
Query: 16 RAGQILWIRGLTRLQTQLRVVRAF 87
R+G+ LW+RG+ + LRV+RAF
Sbjct: 1102 RSGKSLWVRGMFIIGNHLRVLRAF 1125
>Z68221-1|CAB61039.2| 1252|Caenorhabditis elegans Hypothetical protein
W09C2.3a protein.
Length = 1252
Score = 30.7 bits (66), Expect = 0.14
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +1
Query: 16 RAGQILWIRGLTRLQTQLRVVRAF 87
R+G+ LW+RG+ + LRV+RAF
Sbjct: 1126 RSGKSLWVRGMFIIGNHLRVLRAF 1149
>AY438645-1|AAR00672.1| 1249|Caenorhabditis elegans membrane Calcium
ATPase (136.9kD) (mca-1) protein.
Length = 1249
Score = 30.7 bits (66), Expect = 0.14
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +1
Query: 16 RAGQILWIRGLTRLQTQLRVVRAF 87
R+G+ LW+RG+ + LRV+RAF
Sbjct: 1123 RSGKSLWVRGMFIIGNHLRVLRAF 1146
>AY438644-1|AAR00671.1| 1252|Caenorhabditis elegans membrane Calcium
ATPase (136.6kD) (mca-1) protein.
Length = 1252
Score = 30.7 bits (66), Expect = 0.14
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +1
Query: 16 RAGQILWIRGLTRLQTQLRVVRAF 87
R+G+ LW+RG+ + LRV+RAF
Sbjct: 1126 RSGKSLWVRGMFIIGNHLRVLRAF 1149
>AJ223616-1|CAA11491.1| 1228|Caenorhabditis elegans calcium ATPase
protein.
Length = 1228
Score = 30.7 bits (66), Expect = 0.14
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +1
Query: 16 RAGQILWIRGLTRLQTQLRVVRAF 87
R+G+ LW+RG+ + LRV+RAF
Sbjct: 1102 RSGKSLWVRGMFIIGNHLRVLRAF 1125
>AY818713-1|AAX35669.1| 691|Caenorhabditis elegans LIN-65S protein.
Length = 691
Score = 29.5 bits (63), Expect = 0.33
Identities = 15/48 (31%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Frame = +1
Query: 88 KSTLEDLEERLSSHSAAEL--RSRLRAPPQDIAYIDADDVPPATRTET 225
++ LE LEERL + E+ +S ++ +DI +++ D V ++R T
Sbjct: 196 ENALEMLEERLKKNEEKEIVEKSDVKPEDEDIIHMETDSVETSSRKRT 243
>AY818712-1|AAX35668.1| 728|Caenorhabditis elegans LIN-65L protein.
Length = 728
Score = 29.5 bits (63), Expect = 0.33
Identities = 15/48 (31%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Frame = +1
Query: 88 KSTLEDLEERLSSHSAAEL--RSRLRAPPQDIAYIDADDVPPATRTET 225
++ LE LEERL + E+ +S ++ +DI +++ D V ++R T
Sbjct: 233 ENALEMLEERLKKNEEKEIVEKSDVKPEDEDIIHMETDSVETSSRKRT 280
>AC025726-22|AAN73851.2| 512|Caenorhabditis elegans Abnormal cell
lineage protein 65,isoform b protein.
Length = 512
Score = 29.5 bits (63), Expect = 0.33
Identities = 15/48 (31%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Frame = +1
Query: 88 KSTLEDLEERLSSHSAAEL--RSRLRAPPQDIAYIDADDVPPATRTET 225
++ LE LEERL + E+ +S ++ +DI +++ D V ++R T
Sbjct: 233 ENALEMLEERLKKNEEKEIVEKSDVKPEDEDIIHMETDSVETSSRKRT 280
>AC025726-21|AAK73935.3| 728|Caenorhabditis elegans Abnormal cell
lineage protein 65,isoform a protein.
Length = 728
Score = 29.5 bits (63), Expect = 0.33
Identities = 15/48 (31%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Frame = +1
Query: 88 KSTLEDLEERLSSHSAAEL--RSRLRAPPQDIAYIDADDVPPATRTET 225
++ LE LEERL + E+ +S ++ +DI +++ D V ++R T
Sbjct: 233 ENALEMLEERLKKNEEKEIVEKSDVKPEDEDIIHMETDSVETSSRKRT 280
>U00048-6|AAB53828.1| 873|Caenorhabditis elegans Hypothetical
protein C05D11.8 protein.
Length = 873
Score = 27.5 bits (58), Expect = 1.3
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +2
Query: 62 RSCVWYARSSLRWRTSKS 115
R C W+ R+ + WR SKS
Sbjct: 148 RLCEWFQRADIYWRVSKS 165
>Z54284-1|CAA91059.1| 2198|Caenorhabditis elegans Hypothetical protein
D2085.1 protein.
Length = 2198
Score = 26.6 bits (56), Expect = 2.3
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +1
Query: 67 LRVVRAFKSTLEDLEERLSSHSAAELRSRLRAPPQDIAYIDAD 195
L V K T+++L +R+S++ R PPQD YI+ D
Sbjct: 1726 LTAVHDGKLTMKELTDRMSTNP----RRIFNLPPQDDTYIEVD 1764
>Z98866-21|CAD56612.1| 743|Caenorhabditis elegans Hypothetical
protein Y49E10.23b protein.
Length = 743
Score = 26.2 bits (55), Expect = 3.1
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = +1
Query: 55 LQTQLRVVRAFKSTLEDLEERLSSHSAAELRSRLRAPPQDIAYIDADDVPPATRTE 222
L+ QL + K ++ E +L + S AEL RLR D+ + + AT+ E
Sbjct: 252 LRKQLIQAKDDKHIIQQYEVKLQT-STAELERRLRESEHDVERLRTSQLEMATKFE 306
>Z98866-20|CAB11567.1| 734|Caenorhabditis elegans Hypothetical
protein Y49E10.23a protein.
Length = 734
Score = 26.2 bits (55), Expect = 3.1
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = +1
Query: 55 LQTQLRVVRAFKSTLEDLEERLSSHSAAELRSRLRAPPQDIAYIDADDVPPATRTE 222
L+ QL + K ++ E +L + S AEL RLR D+ + + AT+ E
Sbjct: 252 LRKQLIQAKDDKHIIQQYEVKLQT-STAELERRLRESEHDVERLRTSQLEMATKFE 306
>AL132898-11|CAB60945.4| 552|Caenorhabditis elegans Hypothetical
protein Y59A8B.22 protein.
Length = 552
Score = 26.2 bits (55), Expect = 3.1
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +1
Query: 58 QTQLRVVRAFKSTLEDLEERLSSHSAAEL 144
+ + R V+AFK L DL E HS AE+
Sbjct: 510 ELKTRRVQAFKKNLTDLAELEIKHSKAEI 538
>U55854-5|AAA98014.1| 103|Caenorhabditis elegans Hypothetical
protein C04G6.6 protein.
Length = 103
Score = 25.4 bits (53), Expect = 5.4
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = +1
Query: 88 KSTLEDLEERLSSHSAAELRSRLRAPPQDIAYIDADDVPPATR 216
K ++L+ + S +S +E+ + ++ DADD PP R
Sbjct: 40 KKPKKNLKNKKSRNSESEMSDSGKTTDCEMEISDADDYPPVKR 82
>Z99942-8|CAC70091.2| 439|Caenorhabditis elegans Hypothetical
protein H13N06.3b protein.
Length = 439
Score = 25.0 bits (52), Expect = 7.1
Identities = 12/27 (44%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Frame = +1
Query: 76 VRAFKSTLEDL-EERLSSHSAAELRSR 153
V+ FKSTLE++ +ER S + ++ SR
Sbjct: 48 VQIFKSTLEEMNDERTSKNHIRDIHSR 74
>Z99942-2|CAB17072.1| 468|Caenorhabditis elegans Hypothetical
protein H13N06.3a protein.
Length = 468
Score = 25.0 bits (52), Expect = 7.1
Identities = 12/27 (44%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Frame = +1
Query: 76 VRAFKSTLEDL-EERLSSHSAAELRSR 153
V+ FKSTLE++ +ER S + ++ SR
Sbjct: 77 VQIFKSTLEEMNDERTSKNHIRDIHSR 103
>Z82060-6|CAB04887.1| 301|Caenorhabditis elegans Hypothetical
protein T27F6.8 protein.
Length = 301
Score = 24.6 bits (51), Expect = 9.4
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +1
Query: 64 QLRVVRAFKSTLEDLEERLSSHSAAELRSR 153
Q+R+ R + E LEE+ S ELR R
Sbjct: 71 QIRLARLCREVKEHLEEKYSKIRKLELRKR 100
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,778,054
Number of Sequences: 27780
Number of extensions: 38115
Number of successful extensions: 174
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 173
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 174
length of database: 12,740,198
effective HSP length: 63
effective length of database: 10,990,058
effective search space used: 219801160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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