Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0014_K07
         (631 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY739659-1|AAU85298.1|  288|Apis mellifera hyperpolarization-act...    23   1.9  
AY739658-1|AAU85297.1|  664|Apis mellifera hyperpolarization-act...    23   1.9  
AY280848-1|AAQ16312.1|  632|Apis mellifera hyperpolarization-act...    23   1.9  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          22   5.7  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      22   5.7  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    21   9.9  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    21   9.9  

>AY739659-1|AAU85298.1|  288|Apis mellifera
           hyperpolarization-activated ion channelvariant T
           protein.
          Length = 288

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 8/24 (33%), Positives = 18/24 (75%)
 Frame = -3

Query: 125 INSKWLKYFYLSIVIYLM*LMVNF 54
           ++++W+ +  LS  I+L+ ++VNF
Sbjct: 117 LSTRWIAFNCLSDTIFLIDIVVNF 140


>AY739658-1|AAU85297.1|  664|Apis mellifera
           hyperpolarization-activated ion channelvariant L
           protein.
          Length = 664

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 8/24 (33%), Positives = 18/24 (75%)
 Frame = -3

Query: 125 INSKWLKYFYLSIVIYLM*LMVNF 54
           ++++W+ +  LS  I+L+ ++VNF
Sbjct: 117 LSTRWIAFNCLSDTIFLIDIVVNF 140


>AY280848-1|AAQ16312.1|  632|Apis mellifera
           hyperpolarization-activated ion channel protein.
          Length = 632

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 8/24 (33%), Positives = 18/24 (75%)
 Frame = -3

Query: 125 INSKWLKYFYLSIVIYLM*LMVNF 54
           ++++W+ +  LS  I+L+ ++VNF
Sbjct: 117 LSTRWIAFNCLSDTIFLIDIVVNF 140


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -2

Query: 126 DKLKVVKIFLSKYSYLF 76
           D++K   ++L KY YLF
Sbjct: 526 DEIKHDMVYLQKYFYLF 542


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -2

Query: 126 DKLKVVKIFLSKYSYLF 76
           D++K   ++L KY YLF
Sbjct: 526 DEIKHDMVYLQKYFYLF 542


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = +2

Query: 392 QFLKLLPVYLLVIG 433
           +FL +LP++L  +G
Sbjct: 145 EFLSILPIFLYALG 158


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = +2

Query: 392 QFLKLLPVYLLVIG 433
           +FL +LP++L  +G
Sbjct: 183 EFLSILPIFLYALG 196


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,712
Number of Sequences: 438
Number of extensions: 2749
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18826962
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)