Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0014_K06
         (635 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79754-13|CAB02101.1|  153|Caenorhabditis elegans Hypothetical p...   208   3e-54
AC006644-2|AAF39837.1|  118|Caenorhabditis elegans Hypothetical ...    73   1e-13
AC025721-13|AAR85897.1|  139|Caenorhabditis elegans Hypothetical...    45   5e-05
U41554-3|AAA83298.2|  745|Caenorhabditis elegans Nematode astaci...    34   0.098
U29382-6|AAF99998.1|  379|Caenorhabditis elegans Hypothetical pr...    27   8.5  

>Z79754-13|CAB02101.1|  153|Caenorhabditis elegans Hypothetical
           protein F25H2.5 protein.
          Length = 153

 Score =  208 bits (508), Expect = 3e-54
 Identities = 95/149 (63%), Positives = 117/149 (78%), Gaps = 1/149 (0%)
 Frame = +3

Query: 141 ERTFLMVKPDGVQRGLVGTIIERFEKKGFKLVGLKFVWPSEELLQQHYSDLASRPFFPGL 320
           ERTF+ +KPDGV RGLVG II RFE++G+KLV LK +  S+  L+ HY DL  +PFFP L
Sbjct: 5   ERTFIAIKPDGVHRGLVGKIIARFEERGYKLVALKQMTASKAHLEVHYQDLKDKPFFPSL 64

Query: 321 VKYMSSGPVVPMVWEGLNVVKTGRQMLGATNPADSQPGTIRGDLCIQVGRNIIHGSDSVE 500
           ++YMSSGPVV MVW+GL+VVK GR MLGATNP  S PGTIRGD CIQ GRNI HGSD+V+
Sbjct: 65  IEYMSSGPVVAMVWQGLDVVKQGRSMLGATNPLASAPGTIRGDFCIQTGRNICHGSDAVD 124

Query: 501 SANKEIALWFTEKEVVGW-TPAAENWVYE 584
           SAN+EIA WF ++E+  + +P   +WVYE
Sbjct: 125 SANREIAHWFKQEEINDYASPFINSWVYE 153


>AC006644-2|AAF39837.1|  118|Caenorhabditis elegans Hypothetical
           protein F55A3.6 protein.
          Length = 118

 Score = 73.3 bits (172), Expect = 1e-13
 Identities = 39/79 (49%), Positives = 49/79 (62%)
 Frame = +3

Query: 300 RPFFPGLVKYMSSGPVVPMVWEGLNVVKTGRQMLGATNPADSQPGTIRGDLCIQVGRNII 479
           +PFFP L+ YMSSGPVV M+WEG +VVK  R +LG       +  +I  DL ++      
Sbjct: 33  KPFFPLLIDYMSSGPVVAMLWEGCDVVKRARVILGEELEV-GEFRSIFYDLVVRDTHKGC 91

Query: 480 HGSDSVESANKEIALWFTE 536
           H SDSV SAN+E  LWF E
Sbjct: 92  HCSDSVASANREYVLWFEE 110


>AC025721-13|AAR85897.1|  139|Caenorhabditis elegans Hypothetical
           protein Y48G8AL.15 protein.
          Length = 139

 Score = 44.8 bits (101), Expect = 5e-05
 Identities = 39/136 (28%), Positives = 62/136 (45%), Gaps = 2/136 (1%)
 Frame = +3

Query: 126 MADQRERTFLMV-KPDGV-QRGLVGTIIERFEKKGFKLVGLKFVWPSEELLQQHYSDLAS 299
           +  Q    FL+V KP+ V  R L    +      G ++  ++ +  S  L +Q Y+    
Sbjct: 4   VGSQNALKFLVVLKPEIVAHRVLAQVALSELRSNGIEIEEMRQMKISGSLAKQLYAQHQG 63

Query: 300 RPFFPGLVKYMSSGPVVPMVWEGLNVVKTGRQMLGATNPADSQPGTIRGDLCIQVGRNII 479
           + F+  LV+++SSGPV+ M   G      G   L        QP  IR    +   RN+ 
Sbjct: 64  KFFYDRLVRHISSGPVIAMRVSGNARKCIGSSRLWPRLEPTVQP--IRQRFALSDVRNVA 121

Query: 480 HGSDSVESANKEIALW 527
           H SD  ++A KE+ L+
Sbjct: 122 HASDE-DAAEKELQLF 136


>U41554-3|AAA83298.2|  745|Caenorhabditis elegans Nematode astacin
           protease protein38 protein.
          Length = 745

 Score = 33.9 bits (74), Expect = 0.098
 Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
 Frame = +2

Query: 347 CSHGLGGPECRQNWPSNARCYQSS*FSTRYHSRRLMYPS--WT 469
           C  GL G  C Q +PSNA+C +      R+ + R  Y S  WT
Sbjct: 336 CPEGLSGRYCEQVYPSNAQCARGKLTRERHINERECYQSAIWT 378


>U29382-6|AAF99998.1|  379|Caenorhabditis elegans Hypothetical
           protein R03H10.1 protein.
          Length = 379

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 9/32 (28%), Positives = 19/32 (59%)
 Frame = +3

Query: 267 LLQQHYSDLASRPFFPGLVKYMSSGPVVPMVW 362
           LL + + ++ S   +PG V+++   P++P  W
Sbjct: 144 LLDRCWKNVDSMELYPGTVQFLDKLPIIPSNW 175


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,828,100
Number of Sequences: 27780
Number of extensions: 309694
Number of successful extensions: 866
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 840
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 865
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1406256614
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)