Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_K04
(405 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68105-1|CAA92122.2| 195|Caenorhabditis elegans Hypothetical pr... 34 0.034
Z83232-1|CAB05755.3| 1764|Caenorhabditis elegans Hypothetical pr... 30 0.73
AB162421-1|BAD36749.1| 1766|Caenorhabditis elegans plexin protein. 30 0.73
Z69646-2|CAA93475.1| 1087|Caenorhabditis elegans Hypothetical pr... 28 2.2
Z69646-1|CAA93473.3| 1209|Caenorhabditis elegans Hypothetical pr... 28 2.2
U42835-6|AAA83589.2| 816|Caenorhabditis elegans Dehydrogenases,... 28 2.9
AL033514-25|CAA22109.1| 570|Caenorhabditis elegans Hypothetical... 27 3.9
AC006791-4|AAM97974.1| 603|Caenorhabditis elegans Metabotropic ... 27 3.9
AC006791-3|ABM01864.1| 906|Caenorhabditis elegans Metabotropic ... 27 3.9
AC006791-2|AAM97973.1| 1042|Caenorhabditis elegans Metabotropic ... 27 3.9
AC006791-1|ABM01865.2| 1044|Caenorhabditis elegans Metabotropic ... 27 3.9
U66261-1|AAB07022.1| 1525|Caenorhabditis elegans multidrug resis... 27 5.1
U41554-4|AAA83299.2| 1525|Caenorhabditis elegans Multidrug resis... 27 5.1
U41034-8|AAA82382.1| 669|Caenorhabditis elegans Hypothetical pr... 27 6.8
Z81130-12|CAB61027.1| 332|Caenorhabditis elegans Hypothetical p... 26 9.0
Z79695-8|CAB01967.2| 332|Caenorhabditis elegans Hypothetical pr... 26 9.0
Z69904-9|CAH60797.1| 2101|Caenorhabditis elegans Hypothetical pr... 26 9.0
Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical pr... 26 9.0
Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical pr... 26 9.0
Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical pr... 26 9.0
Z66511-12|CAH60796.1| 2101|Caenorhabditis elegans Hypothetical p... 26 9.0
Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical p... 26 9.0
Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical p... 26 9.0
Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical pr... 26 9.0
>Z68105-1|CAA92122.2| 195|Caenorhabditis elegans Hypothetical
protein F13E6.1 protein.
Length = 195
Score = 34.3 bits (75), Expect = 0.034
Identities = 23/67 (34%), Positives = 32/67 (47%)
Frame = +1
Query: 25 VSHKLGQMRNSDSFRSIEERVGTAYENVKGKVASRSNSTQSFDEALRDASRAASGATSPT 204
V K MRNS F+S E ++G+A N K ++ S D L A+R S +P
Sbjct: 135 VKEKWNDMRNSSLFKSFESKLGSALNNAK------MAASTSIDH-LAGAARGPSQTGTPV 187
Query: 205 IPENKPM 225
E KP+
Sbjct: 188 AEEAKPI 194
>Z83232-1|CAB05755.3| 1764|Caenorhabditis elegans Hypothetical protein
K04B12.1 protein.
Length = 1764
Score = 29.9 bits (64), Expect = 0.73
Identities = 17/59 (28%), Positives = 27/59 (45%)
Frame = +2
Query: 212 KTNLCLKRQQYYSTATARRLLYYMFILDGRRFATNNFTRAPSFIRIVSHTLGSFKYYVS 388
+TNL L + S L+ + ++ ++ NN T APS R + TL F +S
Sbjct: 1176 QTNLVLSPKSANSVNLGPELINFPHFVENLLWSDNNLTSAPSLARTLPVTLAQFHALLS 1234
>AB162421-1|BAD36749.1| 1766|Caenorhabditis elegans plexin protein.
Length = 1766
Score = 29.9 bits (64), Expect = 0.73
Identities = 17/59 (28%), Positives = 27/59 (45%)
Frame = +2
Query: 212 KTNLCLKRQQYYSTATARRLLYYMFILDGRRFATNNFTRAPSFIRIVSHTLGSFKYYVS 388
+TNL L + S L+ + ++ ++ NN T APS R + TL F +S
Sbjct: 1178 QTNLVLSPKSANSVNLGPELINFPHFVENLLWSDNNLTSAPSLARTLPVTLAQFHALLS 1236
>Z69646-2|CAA93475.1| 1087|Caenorhabditis elegans Hypothetical
protein F57C7.1b protein.
Length = 1087
Score = 28.3 bits (60), Expect = 2.2
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = +1
Query: 127 RSNSTQSFDEALRDASRAASGATSPTIPENKPMP*TPTVLQHRD 258
++ + Q D A+ +AS A + A S P + P P T V+++RD
Sbjct: 41 QTGAVQVNDIAVAEASPAETDAKSSASPVSGPEPPTSAVVENRD 84
>Z69646-1|CAA93473.3| 1209|Caenorhabditis elegans Hypothetical
protein F57C7.1a protein.
Length = 1209
Score = 28.3 bits (60), Expect = 2.2
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = +1
Query: 127 RSNSTQSFDEALRDASRAASGATSPTIPENKPMP*TPTVLQHRD 258
++ + Q D A+ +AS A + A S P + P P T V+++RD
Sbjct: 41 QTGAVQVNDIAVAEASPAETDAKSSASPVSGPEPPTSAVVENRD 84
>U42835-6|AAA83589.2| 816|Caenorhabditis elegans Dehydrogenases,
short chain protein27 protein.
Length = 816
Score = 27.9 bits (59), Expect = 2.9
Identities = 15/32 (46%), Positives = 23/32 (71%), Gaps = 2/32 (6%)
Frame = +1
Query: 4 RGGITAG-VSHKLGQMRNSDSFRSIE-ERVGT 93
R G+TAG + LGQ+ NSD+ R+I+ ++GT
Sbjct: 92 RHGLTAGWLIESLGQLLNSDNIRNIKCSQLGT 123
>AL033514-25|CAA22109.1| 570|Caenorhabditis elegans Hypothetical
protein Y75B8A.25 protein.
Length = 570
Score = 27.5 bits (58), Expect = 3.9
Identities = 15/61 (24%), Positives = 27/61 (44%)
Frame = +1
Query: 67 RSIEERVGTAYENVKGKVASRSNSTQSFDEALRDASRAASGATSPTIPENKPMP*TPTVL 246
R ++ V + ++ K R ++ FD+ D +A S + EN+P PT L
Sbjct: 41 RDFQDSVTRKEDYMREKAIRRQKHSEKFDKKFEDLVKAMSEVDVGSKKENRPFLRKPTDL 100
Query: 247 Q 249
+
Sbjct: 101 E 101
>AC006791-4|AAM97974.1| 603|Caenorhabditis elegans Metabotropic
glutamate receptorfamily protein 3, isoform b protein.
Length = 603
Score = 27.5 bits (58), Expect = 3.9
Identities = 12/33 (36%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +1
Query: 22 GVSHKLGQMRNSDSFRSIE-ERVGTAYENVKGK 117
GV K+G+ R++D F S+E E++ A++ G+
Sbjct: 509 GVYQKVGKWRSTDDFLSVEVEKIRHAFKTAHGE 541
>AC006791-3|ABM01864.1| 906|Caenorhabditis elegans Metabotropic
glutamate receptorfamily protein 3, isoform c protein.
Length = 906
Score = 27.5 bits (58), Expect = 3.9
Identities = 12/33 (36%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +1
Query: 22 GVSHKLGQMRNSDSFRSIE-ERVGTAYENVKGK 117
GV K+G+ R++D F S+E E++ A++ G+
Sbjct: 509 GVYQKVGKWRSTDDFLSVEVEKIRHAFKTAHGE 541
>AC006791-2|AAM97973.1| 1042|Caenorhabditis elegans Metabotropic
glutamate receptorfamily protein 3, isoform a protein.
Length = 1042
Score = 27.5 bits (58), Expect = 3.9
Identities = 12/33 (36%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +1
Query: 22 GVSHKLGQMRNSDSFRSIE-ERVGTAYENVKGK 117
GV K+G+ R++D F S+E E++ A++ G+
Sbjct: 509 GVYQKVGKWRSTDDFLSVEVEKIRHAFKTAHGE 541
>AC006791-1|ABM01865.2| 1044|Caenorhabditis elegans Metabotropic
glutamate receptorfamily protein 3, isoform d protein.
Length = 1044
Score = 27.5 bits (58), Expect = 3.9
Identities = 12/33 (36%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +1
Query: 22 GVSHKLGQMRNSDSFRSIE-ERVGTAYENVKGK 117
GV K+G+ R++D F S+E E++ A++ G+
Sbjct: 509 GVYQKVGKWRSTDDFLSVEVEKIRHAFKTAHGE 541
>U66261-1|AAB07022.1| 1525|Caenorhabditis elegans multidrug
resistance related protein2 protein.
Length = 1525
Score = 27.1 bits (57), Expect = 5.1
Identities = 14/48 (29%), Positives = 21/48 (43%)
Frame = +1
Query: 46 MRNSDSFRSIEERVGTAYENVKGKVASRSNSTQSFDEALRDASRAASG 189
+ NS +F E +G+VAS + + DE LRD + G
Sbjct: 827 LNNSGAFAEFLEEFLIEESKTRGRVASIGDGSGEVDEILRDLGQVKPG 874
>U41554-4|AAA83299.2| 1525|Caenorhabditis elegans Multidrug
resistance protein familyprotein 2 protein.
Length = 1525
Score = 27.1 bits (57), Expect = 5.1
Identities = 14/48 (29%), Positives = 21/48 (43%)
Frame = +1
Query: 46 MRNSDSFRSIEERVGTAYENVKGKVASRSNSTQSFDEALRDASRAASG 189
+ NS +F E +G+VAS + + DE LRD + G
Sbjct: 827 LNNSGAFAEFLEEFLIEESKTRGRVASIGDGSGEVDEILRDLGQVKPG 874
>U41034-8|AAA82382.1| 669|Caenorhabditis elegans Hypothetical
protein M02D8.5 protein.
Length = 669
Score = 26.6 bits (56), Expect = 6.8
Identities = 15/52 (28%), Positives = 26/52 (50%)
Frame = +1
Query: 70 SIEERVGTAYENVKGKVASRSNSTQSFDEALRDASRAASGATSPTIPENKPM 225
SIE+ G + + GK+ S +T SF + D ++G T + +N P+
Sbjct: 22 SIEQNDGFPHSGISGKIISYDLNTISFFQC-NDQVDLSTGETYYLVSQNYPL 72
>Z81130-12|CAB61027.1| 332|Caenorhabditis elegans Hypothetical
protein F27D4.1 protein.
Length = 332
Score = 26.2 bits (55), Expect = 9.0
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 128 GRIQHRVSMRLCVTRVALRAVPPRPLFQKTNLCLK 232
G IQH M+ VA+ P P+FQ ++ LK
Sbjct: 283 GAIQHLAGMKDSKVIVAINKDPDAPIFQVADIGLK 317
>Z79695-8|CAB01967.2| 332|Caenorhabditis elegans Hypothetical
protein F27D4.1 protein.
Length = 332
Score = 26.2 bits (55), Expect = 9.0
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 128 GRIQHRVSMRLCVTRVALRAVPPRPLFQKTNLCLK 232
G IQH M+ VA+ P P+FQ ++ LK
Sbjct: 283 GAIQHLAGMKDSKVIVAINKDPDAPIFQVADIGLK 317
>Z69904-9|CAH60797.1| 2101|Caenorhabditis elegans Hypothetical protein
F07A11.6e protein.
Length = 2101
Score = 26.2 bits (55), Expect = 9.0
Identities = 14/51 (27%), Positives = 24/51 (47%)
Frame = +1
Query: 118 VASRSNSTQSFDEALRDASRAASGATSPTIPENKPMP*TPTVLQHRDRAPP 270
V ++S+ + D ++RD S A SP +PM T ++ + PP
Sbjct: 1209 VTAKSSVSSIDDPSIRDEFSMNSAADSPMSTTGRPMVLTKAAMKAFNSTPP 1259
>Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical protein
F07A11.6c protein.
Length = 2392
Score = 26.2 bits (55), Expect = 9.0
Identities = 14/51 (27%), Positives = 24/51 (47%)
Frame = +1
Query: 118 VASRSNSTQSFDEALRDASRAASGATSPTIPENKPMP*TPTVLQHRDRAPP 270
V ++S+ + D ++RD S A SP +PM T ++ + PP
Sbjct: 1500 VTAKSSVSSIDDPSIRDEFSMNSAADSPMSTTGRPMVLTKAAMKAFNSTPP 1550
>Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical protein
F07A11.6b protein.
Length = 2407
Score = 26.2 bits (55), Expect = 9.0
Identities = 14/51 (27%), Positives = 24/51 (47%)
Frame = +1
Query: 118 VASRSNSTQSFDEALRDASRAASGATSPTIPENKPMP*TPTVLQHRDRAPP 270
V ++S+ + D ++RD S A SP +PM T ++ + PP
Sbjct: 1515 VTAKSSVSSIDDPSIRDEFSMNSAADSPMSTTGRPMVLTKAAMKAFNSTPP 1565
>Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical protein
F07A11.6a protein.
Length = 2211
Score = 26.2 bits (55), Expect = 9.0
Identities = 14/51 (27%), Positives = 24/51 (47%)
Frame = +1
Query: 118 VASRSNSTQSFDEALRDASRAASGATSPTIPENKPMP*TPTVLQHRDRAPP 270
V ++S+ + D ++RD S A SP +PM T ++ + PP
Sbjct: 1515 VTAKSSVSSIDDPSIRDEFSMNSAADSPMSTTGRPMVLTKAAMKAFNSTPP 1565
>Z66511-12|CAH60796.1| 2101|Caenorhabditis elegans Hypothetical
protein F07A11.6e protein.
Length = 2101
Score = 26.2 bits (55), Expect = 9.0
Identities = 14/51 (27%), Positives = 24/51 (47%)
Frame = +1
Query: 118 VASRSNSTQSFDEALRDASRAASGATSPTIPENKPMP*TPTVLQHRDRAPP 270
V ++S+ + D ++RD S A SP +PM T ++ + PP
Sbjct: 1209 VTAKSSVSSIDDPSIRDEFSMNSAADSPMSTTGRPMVLTKAAMKAFNSTPP 1259
>Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical
protein F07A11.6c protein.
Length = 2392
Score = 26.2 bits (55), Expect = 9.0
Identities = 14/51 (27%), Positives = 24/51 (47%)
Frame = +1
Query: 118 VASRSNSTQSFDEALRDASRAASGATSPTIPENKPMP*TPTVLQHRDRAPP 270
V ++S+ + D ++RD S A SP +PM T ++ + PP
Sbjct: 1500 VTAKSSVSSIDDPSIRDEFSMNSAADSPMSTTGRPMVLTKAAMKAFNSTPP 1550
>Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical
protein F07A11.6b protein.
Length = 2407
Score = 26.2 bits (55), Expect = 9.0
Identities = 14/51 (27%), Positives = 24/51 (47%)
Frame = +1
Query: 118 VASRSNSTQSFDEALRDASRAASGATSPTIPENKPMP*TPTVLQHRDRAPP 270
V ++S+ + D ++RD S A SP +PM T ++ + PP
Sbjct: 1515 VTAKSSVSSIDDPSIRDEFSMNSAADSPMSTTGRPMVLTKAAMKAFNSTPP 1565
>Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical protein
F07A11.6a protein.
Length = 2211
Score = 26.2 bits (55), Expect = 9.0
Identities = 14/51 (27%), Positives = 24/51 (47%)
Frame = +1
Query: 118 VASRSNSTQSFDEALRDASRAASGATSPTIPENKPMP*TPTVLQHRDRAPP 270
V ++S+ + D ++RD S A SP +PM T ++ + PP
Sbjct: 1515 VTAKSSVSSIDDPSIRDEFSMNSAADSPMSTTGRPMVLTKAAMKAFNSTPP 1565
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,038,680
Number of Sequences: 27780
Number of extensions: 172208
Number of successful extensions: 589
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 566
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 589
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 641068680
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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