Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_K03
(542 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M17885-1|AAA36470.1| 317|Homo sapiens protein ( Human acidic ri... 263 2e-70
BC015690-1|AAH15690.1| 317|Homo sapiens ribosomal protein, larg... 263 2e-70
BC015173-1|AAH15173.1| 317|Homo sapiens ribosomal protein, larg... 263 2e-70
BC009867-1|AAH09867.1| 317|Homo sapiens ribosomal protein, larg... 263 2e-70
BC008594-1|AAH08594.1| 317|Homo sapiens ribosomal protein, larg... 263 2e-70
BC008092-1|AAH08092.1| 317|Homo sapiens ribosomal protein, larg... 263 2e-70
BC005863-1|AAH05863.1| 317|Homo sapiens ribosomal protein, larg... 263 2e-70
BC003655-1|AAH03655.1| 317|Homo sapiens ribosomal protein, larg... 263 2e-70
BC001834-1|AAH01834.1| 317|Homo sapiens ribosomal protein, larg... 263 2e-70
BC000752-1|AAH00752.1| 317|Homo sapiens ribosomal protein, larg... 263 2e-70
BC000345-1|AAH00345.1| 317|Homo sapiens ribosomal protein, larg... 263 2e-70
BC000087-1|AAH00087.1| 317|Homo sapiens ribosomal protein, larg... 263 2e-70
AK222468-1|BAD96188.1| 317|Homo sapiens ribosomal protein P0 va... 263 2e-70
AC004263-1|AAC05176.1| 317|Homo sapiens WUGSC:H_278C19.2 protein. 263 2e-70
BC001127-1|AAH01127.1| 317|Homo sapiens ribosomal protein, larg... 262 7e-70
AK222571-1|BAD96291.1| 317|Homo sapiens ribosomal protein P0 va... 260 2e-69
AY064377-1|AAL62450.1| 317|Homo sapiens BLOCK 23 protein. 256 3e-68
BC104645-1|AAI04646.1| 157|Homo sapiens RPLP0 protein protein. 133 3e-31
BC107717-1|AAI07718.1| 255|Homo sapiens RPLP0 protein protein. 128 2e-29
BC070194-1|AAH70194.1| 254|Homo sapiens RPLP0 protein protein. 119 6e-27
AB007187-1|BAA25845.1| 93|Homo sapiens ribosomal protein P0 pr... 54 4e-07
BC006504-1|AAH06504.1| 239|Homo sapiens mRNA turnover 4 homolog... 44 5e-04
BC003013-1|AAH03013.1| 239|Homo sapiens mRNA turnover 4 homolog... 44 5e-04
AY303790-1|AAP68821.1| 239|Homo sapiens acidic ribosomal protei... 44 5e-04
AL035413-12|CAI22233.1| 239|Homo sapiens mRNA turnover 4 homolo... 44 5e-04
AK027569-1|BAB55205.1| 239|Homo sapiens protein ( Homo sapiens ... 44 5e-04
AF173378-1|AAD52608.1| 239|Homo sapiens 60S acidic ribosomal pr... 44 5e-04
BC053670-1|AAH53670.1| 568|Homo sapiens CES3 protein protein. 34 0.37
AY358609-1|AAQ88972.1| 571|Homo sapiens carboxylesterase Hlo pr... 34 0.37
AK097538-1|BAC05093.1| 207|Homo sapiens protein ( Homo sapiens ... 34 0.37
U76604-1|AAB51499.1| 1497|Homo sapiens 180 kDa bullous pemphigoi... 31 2.0
M91669-1|AAA35605.1| 1532|Homo sapiens autoantigen protein. 31 2.0
BC004478-1|AAH04478.1| 393|Homo sapiens COL17A1 protein protein. 31 2.0
AL138761-6|CAM13376.1| 417|Homo sapiens collagen type XVII alph... 31 2.0
AL138761-5|CAC00589.1| 1497|Homo sapiens collagen type XVII alph... 31 2.0
AL138761-4|CAI12398.1| 1415|Homo sapiens collagen type XVII alph... 31 2.0
AF088439-1|AAD29537.1| 42|Homo sapiens T-cell receptor beta ch... 31 3.4
AF051099-1|AAD15786.1| 217|Homo sapiens immunoglobulin G kappa ... 31 3.4
AF088442-1|AAD29539.1| 43|Homo sapiens T-cell receptor beta ch... 29 8.0
>M17885-1|AAA36470.1| 317|Homo sapiens protein ( Human acidic
ribosomal phosphoprotein P0 mRNA, complete cds. ).
Length = 317
Score = 263 bits (645), Expect = 2e-70
Identities = 123/177 (69%), Positives = 148/177 (83%)
Frame = +1
Query: 10 EKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKT 189
EKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP V +PA NTGLGPEKT
Sbjct: 76 EKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKT 135
Query: 190 SFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDS 369
SFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNISPFS+GLV++QV+D+
Sbjct: 136 SFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDN 195
Query: 370 GTIFAPAILDIKPEDLREKFLAGVANVAALSLSIGYPTVASAPHSIANGFKNLLAIA 540
G+I+ P +LDI E L +FL GV NVA++ L IGYPTVAS PHSI NG+K +LA++
Sbjct: 196 GSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALS 252
>BC015690-1|AAH15690.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 263 bits (645), Expect = 2e-70
Identities = 123/177 (69%), Positives = 148/177 (83%)
Frame = +1
Query: 10 EKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKT 189
EKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP V +PA NTGLGPEKT
Sbjct: 76 EKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKT 135
Query: 190 SFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDS 369
SFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNISPFS+GLV++QV+D+
Sbjct: 136 SFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDN 195
Query: 370 GTIFAPAILDIKPEDLREKFLAGVANVAALSLSIGYPTVASAPHSIANGFKNLLAIA 540
G+I+ P +LDI E L +FL GV NVA++ L IGYPTVAS PHSI NG+K +LA++
Sbjct: 196 GSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALS 252
>BC015173-1|AAH15173.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 263 bits (645), Expect = 2e-70
Identities = 123/177 (69%), Positives = 148/177 (83%)
Frame = +1
Query: 10 EKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKT 189
EKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP V +PA NTGLGPEKT
Sbjct: 76 EKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKT 135
Query: 190 SFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDS 369
SFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNISPFS+GLV++QV+D+
Sbjct: 136 SFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDN 195
Query: 370 GTIFAPAILDIKPEDLREKFLAGVANVAALSLSIGYPTVASAPHSIANGFKNLLAIA 540
G+I+ P +LDI E L +FL GV NVA++ L IGYPTVAS PHSI NG+K +LA++
Sbjct: 196 GSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALS 252
>BC009867-1|AAH09867.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 263 bits (645), Expect = 2e-70
Identities = 123/177 (69%), Positives = 148/177 (83%)
Frame = +1
Query: 10 EKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKT 189
EKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP V +PA NTGLGPEKT
Sbjct: 76 EKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKT 135
Query: 190 SFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDS 369
SFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNISPFS+GLV++QV+D+
Sbjct: 136 SFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDN 195
Query: 370 GTIFAPAILDIKPEDLREKFLAGVANVAALSLSIGYPTVASAPHSIANGFKNLLAIA 540
G+I+ P +LDI E L +FL GV NVA++ L IGYPTVAS PHSI NG+K +LA++
Sbjct: 196 GSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALS 252
>BC008594-1|AAH08594.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 263 bits (645), Expect = 2e-70
Identities = 123/177 (69%), Positives = 148/177 (83%)
Frame = +1
Query: 10 EKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKT 189
EKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP V +PA NTGLGPEKT
Sbjct: 76 EKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKT 135
Query: 190 SFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDS 369
SFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNISPFS+GLV++QV+D+
Sbjct: 136 SFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDN 195
Query: 370 GTIFAPAILDIKPEDLREKFLAGVANVAALSLSIGYPTVASAPHSIANGFKNLLAIA 540
G+I+ P +LDI E L +FL GV NVA++ L IGYPTVAS PHSI NG+K +LA++
Sbjct: 196 GSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALS 252
>BC008092-1|AAH08092.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 263 bits (645), Expect = 2e-70
Identities = 123/177 (69%), Positives = 148/177 (83%)
Frame = +1
Query: 10 EKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKT 189
EKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP V +PA NTGLGPEKT
Sbjct: 76 EKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKT 135
Query: 190 SFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDS 369
SFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNISPFS+GLV++QV+D+
Sbjct: 136 SFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDN 195
Query: 370 GTIFAPAILDIKPEDLREKFLAGVANVAALSLSIGYPTVASAPHSIANGFKNLLAIA 540
G+I+ P +LDI E L +FL GV NVA++ L IGYPTVAS PHSI NG+K +LA++
Sbjct: 196 GSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALS 252
>BC005863-1|AAH05863.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 263 bits (645), Expect = 2e-70
Identities = 123/177 (69%), Positives = 148/177 (83%)
Frame = +1
Query: 10 EKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKT 189
EKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP V +PA NTGLGPEKT
Sbjct: 76 EKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKT 135
Query: 190 SFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDS 369
SFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNISPFS+GLV++QV+D+
Sbjct: 136 SFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDN 195
Query: 370 GTIFAPAILDIKPEDLREKFLAGVANVAALSLSIGYPTVASAPHSIANGFKNLLAIA 540
G+I+ P +LDI E L +FL GV NVA++ L IGYPTVAS PHSI NG+K +LA++
Sbjct: 196 GSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALS 252
>BC003655-1|AAH03655.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 263 bits (645), Expect = 2e-70
Identities = 123/177 (69%), Positives = 148/177 (83%)
Frame = +1
Query: 10 EKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKT 189
EKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP V +PA NTGLGPEKT
Sbjct: 76 EKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKT 135
Query: 190 SFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDS 369
SFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNISPFS+GLV++QV+D+
Sbjct: 136 SFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDN 195
Query: 370 GTIFAPAILDIKPEDLREKFLAGVANVAALSLSIGYPTVASAPHSIANGFKNLLAIA 540
G+I+ P +LDI E L +FL GV NVA++ L IGYPTVAS PHSI NG+K +LA++
Sbjct: 196 GSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALS 252
>BC001834-1|AAH01834.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 263 bits (645), Expect = 2e-70
Identities = 123/177 (69%), Positives = 148/177 (83%)
Frame = +1
Query: 10 EKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKT 189
EKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP V +PA NTGLGPEKT
Sbjct: 76 EKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKT 135
Query: 190 SFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDS 369
SFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNISPFS+GLV++QV+D+
Sbjct: 136 SFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDN 195
Query: 370 GTIFAPAILDIKPEDLREKFLAGVANVAALSLSIGYPTVASAPHSIANGFKNLLAIA 540
G+I+ P +LDI E L +FL GV NVA++ L IGYPTVAS PHSI NG+K +LA++
Sbjct: 196 GSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALS 252
>BC000752-1|AAH00752.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 263 bits (645), Expect = 2e-70
Identities = 123/177 (69%), Positives = 148/177 (83%)
Frame = +1
Query: 10 EKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKT 189
EKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP V +PA NTGLGPEKT
Sbjct: 76 EKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKT 135
Query: 190 SFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDS 369
SFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNISPFS+GLV++QV+D+
Sbjct: 136 SFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDN 195
Query: 370 GTIFAPAILDIKPEDLREKFLAGVANVAALSLSIGYPTVASAPHSIANGFKNLLAIA 540
G+I+ P +LDI E L +FL GV NVA++ L IGYPTVAS PHSI NG+K +LA++
Sbjct: 196 GSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALS 252
>BC000345-1|AAH00345.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 263 bits (645), Expect = 2e-70
Identities = 123/177 (69%), Positives = 148/177 (83%)
Frame = +1
Query: 10 EKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKT 189
EKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP V +PA NTGLGPEKT
Sbjct: 76 EKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKT 135
Query: 190 SFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDS 369
SFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNISPFS+GLV++QV+D+
Sbjct: 136 SFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDN 195
Query: 370 GTIFAPAILDIKPEDLREKFLAGVANVAALSLSIGYPTVASAPHSIANGFKNLLAIA 540
G+I+ P +LDI E L +FL GV NVA++ L IGYPTVAS PHSI NG+K +LA++
Sbjct: 196 GSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALS 252
>BC000087-1|AAH00087.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 263 bits (645), Expect = 2e-70
Identities = 123/177 (69%), Positives = 148/177 (83%)
Frame = +1
Query: 10 EKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKT 189
EKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP V +PA NTGLGPEKT
Sbjct: 76 EKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKT 135
Query: 190 SFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDS 369
SFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNISPFS+GLV++QV+D+
Sbjct: 136 SFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDN 195
Query: 370 GTIFAPAILDIKPEDLREKFLAGVANVAALSLSIGYPTVASAPHSIANGFKNLLAIA 540
G+I+ P +LDI E L +FL GV NVA++ L IGYPTVAS PHSI NG+K +LA++
Sbjct: 196 GSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALS 252
>AK222468-1|BAD96188.1| 317|Homo sapiens ribosomal protein P0
variant protein.
Length = 317
Score = 263 bits (645), Expect = 2e-70
Identities = 123/177 (69%), Positives = 148/177 (83%)
Frame = +1
Query: 10 EKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKT 189
EKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP V +PA NTGLGPEKT
Sbjct: 76 EKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKT 135
Query: 190 SFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDS 369
SFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNISPFS+GLV++QV+D+
Sbjct: 136 SFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDN 195
Query: 370 GTIFAPAILDIKPEDLREKFLAGVANVAALSLSIGYPTVASAPHSIANGFKNLLAIA 540
G+I+ P +LDI E L +FL GV NVA++ L IGYPTVAS PHSI NG+K +LA++
Sbjct: 196 GSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALS 252
>AC004263-1|AAC05176.1| 317|Homo sapiens WUGSC:H_278C19.2 protein.
Length = 317
Score = 263 bits (645), Expect = 2e-70
Identities = 123/177 (69%), Positives = 148/177 (83%)
Frame = +1
Query: 10 EKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKT 189
EKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP V +PA NTGLGPEKT
Sbjct: 76 EKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKT 135
Query: 190 SFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDS 369
SFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNISPFS+GLV++QV+D+
Sbjct: 136 SFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDN 195
Query: 370 GTIFAPAILDIKPEDLREKFLAGVANVAALSLSIGYPTVASAPHSIANGFKNLLAIA 540
G+I+ P +LDI E L +FL GV NVA++ L IGYPTVAS PHSI NG+K +LA++
Sbjct: 196 GSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALS 252
>BC001127-1|AAH01127.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 262 bits (641), Expect = 7e-70
Identities = 122/177 (68%), Positives = 148/177 (83%)
Frame = +1
Query: 10 EKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKT 189
EKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP V +PA NTGLGPEKT
Sbjct: 76 EKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKT 135
Query: 190 SFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDS 369
SFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNISPFS+GLV++QV+D+
Sbjct: 136 SFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDN 195
Query: 370 GTIFAPAILDIKPEDLREKFLAGVANVAALSLSIGYPTVASAPHSIANGFKNLLAIA 540
G+I+ P +LDI E L +FL GV NVA++ L IGYPTVAS PHSI NG++ +LA++
Sbjct: 196 GSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYERVLALS 252
>AK222571-1|BAD96291.1| 317|Homo sapiens ribosomal protein P0
variant protein.
Length = 317
Score = 260 bits (637), Expect = 2e-69
Identities = 122/177 (68%), Positives = 147/177 (83%)
Frame = +1
Query: 10 EKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKT 189
EKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP V +PA NTGLGPEKT
Sbjct: 76 EKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKT 135
Query: 190 SFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDS 369
SF QAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNISPFS+GLV++QV+D+
Sbjct: 136 SFSQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDN 195
Query: 370 GTIFAPAILDIKPEDLREKFLAGVANVAALSLSIGYPTVASAPHSIANGFKNLLAIA 540
G+I+ P +LDI E L +FL GV NVA++ L IGYPTVAS PHSI NG+K +LA++
Sbjct: 196 GSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALS 252
>AY064377-1|AAL62450.1| 317|Homo sapiens BLOCK 23 protein.
Length = 317
Score = 256 bits (628), Expect = 3e-68
Identities = 121/177 (68%), Positives = 145/177 (81%)
Frame = +1
Query: 10 EKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKT 189
EKLLPHI GNVGFVFT+ DL ++RD LL NKV A AR GAIAP V +PA NTGLGPEKT
Sbjct: 76 EKLLPHIWGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKT 135
Query: 190 SFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDS 369
SFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNISPFS+GLV++QV+D+
Sbjct: 136 SFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDN 195
Query: 370 GTIFAPAILDIKPEDLREKFLAGVANVAALSLSIGYPTVASAPHSIANGFKNLLAIA 540
G+I+ P +LD E L +FL GV NVA++ L GYPTVAS PHSI NG+K +LA++
Sbjct: 196 GSIYNPEVLDKTEETLHSRFLEGVRNVASVCLQTGYPTVASVPHSIINGYKRVLALS 252
>BC104645-1|AAI04646.1| 157|Homo sapiens RPLP0 protein protein.
Length = 157
Score = 133 bits (322), Expect = 3e-31
Identities = 61/91 (67%), Positives = 76/91 (83%)
Frame = +1
Query: 268 KPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPAILDIKPEDLREKFLAGVAN 447
K GDKVGASEATLLNMLNISPFS+GLV++QV+D+G+I+ P +LDI E L +FL GV N
Sbjct: 2 KTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRN 61
Query: 448 VAALSLSIGYPTVASAPHSIANGFKNLLAIA 540
VA++ L IGYPTVAS PHSI NG+K +LA++
Sbjct: 62 VASVCLQIGYPTVASVPHSIINGYKRVLALS 92
>BC107717-1|AAI07718.1| 255|Homo sapiens RPLP0 protein protein.
Length = 255
Score = 128 bits (308), Expect = 2e-29
Identities = 60/80 (75%), Positives = 67/80 (83%)
Frame = +1
Query: 10 EKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKT 189
EKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP V +PA NTGLGPEKT
Sbjct: 76 EKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKT 135
Query: 190 SFFQALSIPTKISKGTIEII 249
SFFQAL I TKIS+GTIEI+
Sbjct: 136 SFFQALGITTKISRGTIEIL 155
Score = 54.0 bits (124), Expect = 3e-07
Identities = 23/37 (62%), Positives = 30/37 (81%)
Frame = +1
Query: 430 LAGVANVAALSLSIGYPTVASAPHSIANGFKNLLAIA 540
+ GV NVA++ L IGYPTVAS PHSI NG+K +LA++
Sbjct: 154 ILGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALS 190
>BC070194-1|AAH70194.1| 254|Homo sapiens RPLP0 protein protein.
Length = 254
Score = 119 bits (287), Expect = 6e-27
Identities = 58/80 (72%), Positives = 66/80 (82%)
Frame = +1
Query: 10 EKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKT 189
EKLLP ++GNVGFVFT+ DL ++RD LL NKV A AR GAIAP V +PA NTGLGPEKT
Sbjct: 76 EKLLP-LRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKT 134
Query: 190 SFFQALSIPTKISKGTIEII 249
SFFQAL I TKIS+GTIEI+
Sbjct: 135 SFFQALGITTKISRGTIEIL 154
Score = 54.0 bits (124), Expect = 3e-07
Identities = 23/37 (62%), Positives = 30/37 (81%)
Frame = +1
Query: 430 LAGVANVAALSLSIGYPTVASAPHSIANGFKNLLAIA 540
+ GV NVA++ L IGYPTVAS PHSI NG+K +LA++
Sbjct: 153 ILGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALS 189
>AB007187-1|BAA25845.1| 93|Homo sapiens ribosomal protein P0
protein.
Length = 93
Score = 53.6 bits (123), Expect = 4e-07
Identities = 23/35 (65%), Positives = 29/35 (82%)
Frame = +1
Query: 436 GVANVAALSLSIGYPTVASAPHSIANGFKNLLAIA 540
GV NVA++ L IGYPTVAS PHSI NG+K +LA++
Sbjct: 1 GVRNVASVCLQIGYPTVASVPHSIINGYKRVLALS 35
>BC006504-1|AAH06504.1| 239|Homo sapiens mRNA turnover 4 homolog
(S. cerevisiae) protein.
Length = 239
Score = 43.6 bits (98), Expect = 5e-04
Identities = 29/133 (21%), Positives = 57/133 (42%), Gaps = 1/133 (0%)
Frame = +1
Query: 28 IKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTS-FFQA 204
++G VG +FT +V + + AR G A +V + P +
Sbjct: 96 LRGEVGLLFTNRTKEEVNEWFTKYTEMDYARAGNKAAFTVSLDPGPLEQFPHSMEPQLRQ 155
Query: 205 LSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFA 384
L +PT + +G + +++D + K GD + +A +L + + + +K ++DS +
Sbjct: 156 LGLPTALKRGVVTLLSDYEVCKEGDVLTPEQARVLKLFGYEMAEFKVTIKYMWDSQSGRF 215
Query: 385 PAILDIKPEDLRE 423
+ D PE E
Sbjct: 216 QQMGDDLPESASE 228
>BC003013-1|AAH03013.1| 239|Homo sapiens mRNA turnover 4 homolog
(S. cerevisiae) protein.
Length = 239
Score = 43.6 bits (98), Expect = 5e-04
Identities = 29/133 (21%), Positives = 57/133 (42%), Gaps = 1/133 (0%)
Frame = +1
Query: 28 IKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTS-FFQA 204
++G VG +FT +V + + AR G A +V + P +
Sbjct: 96 LRGEVGLLFTNRTKEEVNEWFTKYTEMDYARAGNKAAFTVSLDPGPLEQFPHSMEPQLRQ 155
Query: 205 LSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFA 384
L +PT + +G + +++D + K GD + +A +L + + + +K ++DS +
Sbjct: 156 LGLPTALKRGVVTLLSDYEVCKEGDVLTPEQARVLKLFGYEMAEFKVTIKYMWDSQSGRF 215
Query: 385 PAILDIKPEDLRE 423
+ D PE E
Sbjct: 216 QQMGDDLPESASE 228
>AY303790-1|AAP68821.1| 239|Homo sapiens acidic ribosomal protein
PO-like protein.
Length = 239
Score = 43.6 bits (98), Expect = 5e-04
Identities = 29/133 (21%), Positives = 57/133 (42%), Gaps = 1/133 (0%)
Frame = +1
Query: 28 IKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTS-FFQA 204
++G VG +FT +V + + AR G A +V + P +
Sbjct: 96 LRGEVGLLFTNRTKEEVNEWFTKYTEMDYARAGNKAAFTVSLDPGPLEQFPHSMEPQLRQ 155
Query: 205 LSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFA 384
L +PT + +G + +++D + K GD + +A +L + + + +K ++DS +
Sbjct: 156 LGLPTALKRGVVTLLSDYEVCKEGDVLTPEQARVLKLFGYEMAEFKVTIKYMWDSQSGRF 215
Query: 385 PAILDIKPEDLRE 423
+ D PE E
Sbjct: 216 QQMGDDLPESASE 228
>AL035413-12|CAI22233.1| 239|Homo sapiens mRNA turnover 4 homolog
(S. cerevisiae) protein.
Length = 239
Score = 43.6 bits (98), Expect = 5e-04
Identities = 29/133 (21%), Positives = 57/133 (42%), Gaps = 1/133 (0%)
Frame = +1
Query: 28 IKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTS-FFQA 204
++G VG +FT +V + + AR G A +V + P +
Sbjct: 96 LRGEVGLLFTNRTKEEVNEWFTKYTEMDYARAGNKAAFTVSLDPGPLEQFPHSMEPQLRQ 155
Query: 205 LSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFA 384
L +PT + +G + +++D + K GD + +A +L + + + +K ++DS +
Sbjct: 156 LGLPTALKRGVVTLLSDYEVCKEGDVLTPEQARVLKLFGYEMAEFKVTIKYMWDSQSGRF 215
Query: 385 PAILDIKPEDLRE 423
+ D PE E
Sbjct: 216 QQMGDDLPESASE 228
>AK027569-1|BAB55205.1| 239|Homo sapiens protein ( Homo sapiens
cDNA FLJ14663 fis, clone NT2RP2002862, weakly similar to
60S ACIDIC RIBOSOMAL PROTEIN P0. ).
Length = 239
Score = 43.6 bits (98), Expect = 5e-04
Identities = 29/133 (21%), Positives = 57/133 (42%), Gaps = 1/133 (0%)
Frame = +1
Query: 28 IKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTS-FFQA 204
++G VG +FT +V + + AR G A +V + P +
Sbjct: 96 LRGEVGLLFTNRTKEEVNEWFTKYTEMDYARAGNKAAFTVSLDPGPLEQFPHSMEPQLRQ 155
Query: 205 LSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFA 384
L +PT + +G + +++D + K GD + +A +L + + + +K ++DS +
Sbjct: 156 LGLPTALKRGVVTLLSDYEVCKEGDVLTPEQARVLKLFGYEMAEFKVTIKYMWDSQSGRF 215
Query: 385 PAILDIKPEDLRE 423
+ D PE E
Sbjct: 216 QQMGDDLPESASE 228
>AF173378-1|AAD52608.1| 239|Homo sapiens 60S acidic ribosomal
protein PO protein.
Length = 239
Score = 43.6 bits (98), Expect = 5e-04
Identities = 29/133 (21%), Positives = 57/133 (42%), Gaps = 1/133 (0%)
Frame = +1
Query: 28 IKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTS-FFQA 204
++G VG +FT +V + + AR G A +V + P +
Sbjct: 96 LRGEVGLLFTNRTKEEVNEWFTKYTEMDYARAGNKAAFTVSLDPGPLEQFPHSMEPQLRQ 155
Query: 205 LSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFA 384
L +PT + +G + +++D + K GD + +A +L + + + +K ++DS +
Sbjct: 156 LGLPTALKRGVVTLLSDYEVCKEGDVLTPEQARVLKLFGYEMAEFKVTIKYMWDSQSGRF 215
Query: 385 PAILDIKPEDLRE 423
+ D PE E
Sbjct: 216 QQMGDDLPESASE 228
>BC053670-1|AAH53670.1| 568|Homo sapiens CES3 protein protein.
Length = 568
Score = 33.9 bits (74), Expect = 0.37
Identities = 20/61 (32%), Positives = 33/61 (54%)
Frame = +1
Query: 286 GASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPAILDIKPEDLREKFLAGVANVAALSL 465
G++ ++++ L +SP + GL + + SG I P I+D P L +K +AN A S
Sbjct: 228 GSAGGSIISGLVLSPVAAGLFHRAITQSGVITTPGIIDSHPWPLAQK----IANTLACSS 283
Query: 466 S 468
S
Sbjct: 284 S 284
>AY358609-1|AAQ88972.1| 571|Homo sapiens carboxylesterase Hlo
protein.
Length = 571
Score = 33.9 bits (74), Expect = 0.37
Identities = 20/61 (32%), Positives = 33/61 (54%)
Frame = +1
Query: 286 GASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPAILDIKPEDLREKFLAGVANVAALSL 465
G++ ++++ L +SP + GL + + SG I P I+D P L +K +AN A S
Sbjct: 228 GSAGGSIISGLVLSPVAAGLFHRAITQSGVITTPGIIDSHPWPLAQK----IANTLACSS 283
Query: 466 S 468
S
Sbjct: 284 S 284
>AK097538-1|BAC05093.1| 207|Homo sapiens protein ( Homo sapiens
cDNA FLJ40219 fis, clone TESTI2021637, moderately
similar to LIVER CARBOXYLESTERASE PRECURSOR (EC
3.1.1.1). ).
Length = 207
Score = 33.9 bits (74), Expect = 0.37
Identities = 20/61 (32%), Positives = 33/61 (54%)
Frame = +1
Query: 286 GASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPAILDIKPEDLREKFLAGVANVAALSL 465
G++ ++++ L +SP + GL + + SG I P I+D P L +K +AN A S
Sbjct: 85 GSAGGSIISGLVLSPVAAGLFHRAITQSGVITTPGIIDSHPWPLAQK----IANTLACSS 140
Query: 466 S 468
S
Sbjct: 141 S 141
>U76604-1|AAB51499.1| 1497|Homo sapiens 180 kDa bullous pemphigoid
antigen 2/type XVII collagen protein.
Length = 1497
Score = 31.5 bits (68), Expect = 2.0
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = -1
Query: 377 MVPESYTCLTTRPYEKGEMFNMLRRVASEAPTLSPGFRIWTSL 249
M +S + L T Y G +F + +AS +PTL PG +S+
Sbjct: 238 MTTQSSSLLNTNAYSAGSVFGVPNNMASCSPTLHPGLSTSSSV 280
>M91669-1|AAA35605.1| 1532|Homo sapiens autoantigen protein.
Length = 1532
Score = 31.5 bits (68), Expect = 2.0
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = -1
Query: 377 MVPESYTCLTTRPYEKGEMFNMLRRVASEAPTLSPGFRIWTSL 249
M +S + L T Y G +F + +AS +PTL PG +S+
Sbjct: 273 MTTQSSSLLNTNAYSAGSVFGVPNNMASCSPTLHPGLSTSSSV 315
>BC004478-1|AAH04478.1| 393|Homo sapiens COL17A1 protein protein.
Length = 393
Score = 31.5 bits (68), Expect = 2.0
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = -1
Query: 377 MVPESYTCLTTRPYEKGEMFNMLRRVASEAPTLSPGFRIWTSL 249
M +S + L T Y G +F + +AS +PTL PG +S+
Sbjct: 238 MTTQSSSLLNTNAYSAGSVFGVPNNMASCSPTLHPGLSTSSSV 280
>AL138761-6|CAM13376.1| 417|Homo sapiens collagen type XVII alpha 1
protein.
Length = 417
Score = 31.5 bits (68), Expect = 2.0
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = -1
Query: 377 MVPESYTCLTTRPYEKGEMFNMLRRVASEAPTLSPGFRIWTSL 249
M +S + L T Y G +F + +AS +PTL PG +S+
Sbjct: 238 MTTQSSSLLNTNAYSAGSVFGVPNNMASCSPTLHPGLSTSSSV 280
>AL138761-5|CAC00589.1| 1497|Homo sapiens collagen type XVII alpha 1
protein.
Length = 1497
Score = 31.5 bits (68), Expect = 2.0
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = -1
Query: 377 MVPESYTCLTTRPYEKGEMFNMLRRVASEAPTLSPGFRIWTSL 249
M +S + L T Y G +F + +AS +PTL PG +S+
Sbjct: 238 MTTQSSSLLNTNAYSAGSVFGVPNNMASCSPTLHPGLSTSSSV 280
>AL138761-4|CAI12398.1| 1415|Homo sapiens collagen type XVII alpha 1
protein.
Length = 1415
Score = 31.5 bits (68), Expect = 2.0
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = -1
Query: 377 MVPESYTCLTTRPYEKGEMFNMLRRVASEAPTLSPGFRIWTSL 249
M +S + L T Y G +F + +AS +PTL PG +S+
Sbjct: 238 MTTQSSSLLNTNAYSAGSVFGVPNNMASCSPTLHPGLSTSSSV 280
>AF088439-1|AAD29537.1| 42|Homo sapiens T-cell receptor beta chain
protein.
Length = 42
Score = 30.7 bits (66), Expect = 3.4
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +3
Query: 348 CQTGVRLRYHLRAGNSRHQAGGPSREVP 431
CQ RLR LRAG+ H GP + VP
Sbjct: 14 CQHSSRLRAVLRAGHQAHGHRGPEKRVP 41
>AF051099-1|AAD15786.1| 217|Homo sapiens immunoglobulin G kappa
chain protein.
Length = 217
Score = 30.7 bits (66), Expect = 3.4
Identities = 20/67 (29%), Positives = 32/67 (47%)
Frame = +1
Query: 325 SPFSYGLVVKQVYDSGTIFAPAILDIKPEDLREKFLAGVANVAALSLSIGYPTVASAPHS 504
SP+S+G K T+ AP++ P D E+ +G A+V L L+ YP A
Sbjct: 96 SPWSFGQGTKVEIKRTTVAAPSVFIFPPSD--EQLKSGTASVVCL-LNNFYPREAKVQWK 152
Query: 505 IANGFKN 525
+ N ++
Sbjct: 153 VDNALQS 159
>AF088442-1|AAD29539.1| 43|Homo sapiens T-cell receptor beta chain
protein.
Length = 43
Score = 29.5 bits (63), Expect = 8.0
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +3
Query: 336 VWSCCQTGVRLRYHLRAGNSRHQAGGPSREVP 431
V+ C Q G R LRA ++ H+A GP + VP
Sbjct: 11 VFLCQQQGKGARAVLRARDTAHRARGPEKRVP 42
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,569,221
Number of Sequences: 237096
Number of extensions: 1879507
Number of successful extensions: 5131
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 4908
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5131
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5308067764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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