Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_K02
(593 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY119495-1|AAM50149.1| 432|Drosophila melanogaster GH10162p pro... 64 1e-10
AE013599-3106|AAF46655.1| 432|Drosophila melanogaster CG3295-PA... 64 1e-10
BT001666-1|AAN71421.1| 339|Drosophila melanogaster RE48687p pro... 29 6.3
AY058252-1|AAL13481.1| 561|Drosophila melanogaster GH01404p pro... 29 6.3
AF134239-1|AAD43051.1| 1057|Drosophila melanogaster Recq helicas... 29 6.3
AE014296-2400|AAN11801.1| 1058|Drosophila melanogaster CG4879-PB... 29 6.3
AE014134-2798|AAN10974.1| 325|Drosophila melanogaster CG13284-P... 29 6.3
AE014134-2797|AAF53580.3| 339|Drosophila melanogaster CG13284-P... 29 6.3
AB031087-1|BAA88313.1| 1058|Drosophila melanogaster DNA helicase... 29 6.3
AB031086-1|BAA88312.1| 1058|Drosophila melanogaster DNA helicase... 29 6.3
DQ062776-1|AAY56649.1| 764|Drosophila melanogaster unknown prot... 28 8.3
AY956383-1|AAX59004.1| 381|Drosophila melanogaster activating t... 28 8.3
AY118548-1|AAM49917.1| 1170|Drosophila melanogaster LD30725p pro... 28 8.3
AY058645-1|AAL13874.1| 850|Drosophila melanogaster LD34489p pro... 28 8.3
AE014298-2945|AAF49028.2| 2067|Drosophila melanogaster CG11943-P... 28 8.3
AE014298-2944|AAN09521.1| 2090|Drosophila melanogaster CG11943-P... 28 8.3
AE013599-3968|ABC66046.1| 381|Drosophila melanogaster CG30420-P... 28 8.3
AE013599-3967|AAF47283.2| 850|Drosophila melanogaster CG30420-P... 28 8.3
>AY119495-1|AAM50149.1| 432|Drosophila melanogaster GH10162p
protein.
Length = 432
Score = 64.1 bits (149), Expect = 1e-10
Identities = 39/138 (28%), Positives = 73/138 (52%), Gaps = 2/138 (1%)
Frame = +2
Query: 140 LDKAITKFNNLNENTSRVLQDIIDQVEDLRKEITKQPPDSP--LSQSQVMVVGELADSVK 313
L +A LN +T +V QD D + D + P +P L++ QV V
Sbjct: 47 LSRAEQLVTTLNSST-QVSQD--DPMGDAVSMQVETEPTAPQRLTERQVESVRNALARCH 103
Query: 314 QSVFQMSTDHRELHATVSRVGKSIDRHFIGEYGSVAPKAESFCSVSKRPIMEQAIAQHLF 493
+ V ++ST+HR+LH ++S++GK+IDR+F ++ S + + ++ +AIA+H
Sbjct: 104 ERVQKLSTEHRDLHGSISKIGKAIDRNFSADFSSTM-RVDVLQDEENLMLLNKAIAKHYC 162
Query: 494 RQGLEEIGDAFVTEANIT 547
RQG++++ + E ++
Sbjct: 163 RQGMDDVARTLIRECKMS 180
Score = 31.1 bits (67), Expect = 1.2
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Frame = +2
Query: 128 VEQDLDKAITKFNNLNENTSRVLQDIIDQVEDLRKEITK--QPPDSPLSQSQVMVVGELA 301
VE+DL + ++K L+EN + DI Q+ +L + +++ Q + S +QV +
Sbjct: 11 VEKDLTRVVSKLEQLHENAEADIGDIATQMSELVEVLSRAEQLVTTLNSSTQVSQDDPMG 70
Query: 302 DSVKQSV 322
D+V V
Sbjct: 71 DAVSMQV 77
>AE013599-3106|AAF46655.1| 432|Drosophila melanogaster CG3295-PA
protein.
Length = 432
Score = 64.1 bits (149), Expect = 1e-10
Identities = 39/138 (28%), Positives = 73/138 (52%), Gaps = 2/138 (1%)
Frame = +2
Query: 140 LDKAITKFNNLNENTSRVLQDIIDQVEDLRKEITKQPPDSP--LSQSQVMVVGELADSVK 313
L +A LN +T +V QD D + D + P +P L++ QV V
Sbjct: 47 LSRAEQLVTTLNSST-QVSQD--DPMGDAVSMQVETEPTAPQRLTERQVESVRNALARCH 103
Query: 314 QSVFQMSTDHRELHATVSRVGKSIDRHFIGEYGSVAPKAESFCSVSKRPIMEQAIAQHLF 493
+ V ++ST+HR+LH ++S++GK+IDR+F ++ S + + ++ +AIA+H
Sbjct: 104 ERVQKLSTEHRDLHGSISKIGKAIDRNFSADFSSTM-RVDVLQDEENLMLLNKAIAKHYC 162
Query: 494 RQGLEEIGDAFVTEANIT 547
RQG++++ + E ++
Sbjct: 163 RQGMDDVARTLIRECKMS 180
Score = 31.1 bits (67), Expect = 1.2
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Frame = +2
Query: 128 VEQDLDKAITKFNNLNENTSRVLQDIIDQVEDLRKEITK--QPPDSPLSQSQVMVVGELA 301
VE+DL + ++K L+EN + DI Q+ +L + +++ Q + S +QV +
Sbjct: 11 VEKDLTRVVSKLEQLHENAEADIGDIATQMSELVEVLSRAEQLVTTLNSSTQVSQDDPMG 70
Query: 302 DSVKQSV 322
D+V V
Sbjct: 71 DAVSMQV 77
>BT001666-1|AAN71421.1| 339|Drosophila melanogaster RE48687p
protein.
Length = 339
Score = 28.7 bits (61), Expect = 6.3
Identities = 13/40 (32%), Positives = 24/40 (60%)
Frame = +3
Query: 366 RELANQ*TDILLENMVQLHQKLNPFALLAKDQLWNRLSLN 485
+ELA IL+ N+ +++ L+++D LWN L++N
Sbjct: 141 KELAGIDVGILVNNVGMMYEHPESLDLVSEDLLWNLLTVN 180
>AY058252-1|AAL13481.1| 561|Drosophila melanogaster GH01404p
protein.
Length = 561
Score = 28.7 bits (61), Expect = 6.3
Identities = 15/55 (27%), Positives = 31/55 (56%)
Frame = +2
Query: 227 RKEITKQPPDSPLSQSQVMVVGELADSVKQSVFQMSTDHRELHATVSRVGKSIDR 391
+KEI ++P DSP+ + +V + E D + + ++++H + +V+ S DR
Sbjct: 204 KKEIKEEPIDSPIQEERVNIKSEQMDLEESTPKDIASNHVK-EESVTPESSSSDR 257
>AF134239-1|AAD43051.1| 1057|Drosophila melanogaster Recq helicase 5
protein.
Length = 1057
Score = 28.7 bits (61), Expect = 6.3
Identities = 15/55 (27%), Positives = 31/55 (56%)
Frame = +2
Query: 227 RKEITKQPPDSPLSQSQVMVVGELADSVKQSVFQMSTDHRELHATVSRVGKSIDR 391
+KEI ++P DSP+ + +V + E D + + ++++H + +V+ S DR
Sbjct: 701 KKEIKEEPIDSPIQEERVNIKSEQMDLEESTPKDIASNHVK-EESVTPESSSSDR 754
>AE014296-2400|AAN11801.1| 1058|Drosophila melanogaster CG4879-PB,
isoform B protein.
Length = 1058
Score = 28.7 bits (61), Expect = 6.3
Identities = 15/55 (27%), Positives = 31/55 (56%)
Frame = +2
Query: 227 RKEITKQPPDSPLSQSQVMVVGELADSVKQSVFQMSTDHRELHATVSRVGKSIDR 391
+KEI ++P DSP+ + +V + E D + + ++++H + +V+ S DR
Sbjct: 701 KKEIKEEPIDSPIQEERVNIKSEQMDLEESTPKDIASNHVK-EESVTPESSSSDR 754
>AE014134-2798|AAN10974.1| 325|Drosophila melanogaster CG13284-PA,
isoform A protein.
Length = 325
Score = 28.7 bits (61), Expect = 6.3
Identities = 13/40 (32%), Positives = 24/40 (60%)
Frame = +3
Query: 366 RELANQ*TDILLENMVQLHQKLNPFALLAKDQLWNRLSLN 485
+ELA IL+ N+ +++ L+++D LWN L++N
Sbjct: 127 KELAGIDVGILVNNVGMMYEHPESLDLVSEDLLWNLLTVN 166
>AE014134-2797|AAF53580.3| 339|Drosophila melanogaster CG13284-PB,
isoform B protein.
Length = 339
Score = 28.7 bits (61), Expect = 6.3
Identities = 13/40 (32%), Positives = 24/40 (60%)
Frame = +3
Query: 366 RELANQ*TDILLENMVQLHQKLNPFALLAKDQLWNRLSLN 485
+ELA IL+ N+ +++ L+++D LWN L++N
Sbjct: 141 KELAGIDVGILVNNVGMMYEHPESLDLVSEDLLWNLLTVN 180
>AB031087-1|BAA88313.1| 1058|Drosophila melanogaster DNA helicase
RECQE protein.
Length = 1058
Score = 28.7 bits (61), Expect = 6.3
Identities = 15/55 (27%), Positives = 31/55 (56%)
Frame = +2
Query: 227 RKEITKQPPDSPLSQSQVMVVGELADSVKQSVFQMSTDHRELHATVSRVGKSIDR 391
+KEI ++P DSP+ + +V + E D + + ++++H + +V+ S DR
Sbjct: 701 KKEIKEEPIDSPIQEERVNIKSEQMDLEESTPKDIASNHVK-EESVTPESSSSDR 754
>AB031086-1|BAA88312.1| 1058|Drosophila melanogaster DNA helicase
RECQE protein.
Length = 1058
Score = 28.7 bits (61), Expect = 6.3
Identities = 15/55 (27%), Positives = 31/55 (56%)
Frame = +2
Query: 227 RKEITKQPPDSPLSQSQVMVVGELADSVKQSVFQMSTDHRELHATVSRVGKSIDR 391
+KEI ++P DSP+ + +V + E D + + ++++H + +V+ S DR
Sbjct: 701 KKEIKEEPIDSPIQEERVNIKSEQMDLEESTPKDIASNHVK-EESVTPESSSSDR 754
>DQ062776-1|AAY56649.1| 764|Drosophila melanogaster unknown
protein.
Length = 764
Score = 28.3 bits (60), Expect = 8.3
Identities = 14/51 (27%), Positives = 22/51 (43%)
Frame = -3
Query: 318 LCLTESANSPTTIT*LCDNGESGGCFVISFLKSSTWSIMSCKTLLVFSFKL 166
L +TE N TT + + E CF+ S+W ++ +SF L
Sbjct: 280 LLVTEEPNEHTTRLPIFSDREFAECFLEELYAQSSWQAPRLNAIIAYSFGL 330
>AY956383-1|AAX59004.1| 381|Drosophila melanogaster activating
transcription factor-2 protein.
Length = 381
Score = 28.3 bits (60), Expect = 8.3
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +2
Query: 293 ELADSVKQSVFQMSTDHRELHATVSRVGKSIDRH 394
E D +KQ+ Q+ +++ELH +SR+ K + +H
Sbjct: 305 EHKDLIKQNA-QLQQENQELHERISRLEKELQQH 337
>AY118548-1|AAM49917.1| 1170|Drosophila melanogaster LD30725p
protein.
Length = 1170
Score = 28.3 bits (60), Expect = 8.3
Identities = 14/51 (27%), Positives = 22/51 (43%)
Frame = -3
Query: 318 LCLTESANSPTTIT*LCDNGESGGCFVISFLKSSTWSIMSCKTLLVFSFKL 166
L +TE N TT + + E CF+ S+W ++ +SF L
Sbjct: 93 LLVTEEPNEHTTRLPIFSDREFAECFLEELYAQSSWQAPRLNAIIAYSFGL 143
>AY058645-1|AAL13874.1| 850|Drosophila melanogaster LD34489p
protein.
Length = 850
Score = 28.3 bits (60), Expect = 8.3
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +2
Query: 293 ELADSVKQSVFQMSTDHRELHATVSRVGKSIDRH 394
E D +KQ+ Q+ +++ELH +SR+ K + +H
Sbjct: 305 EHKDLIKQNA-QLQQENQELHERISRLEKELQQH 337
>AE014298-2945|AAF49028.2| 2067|Drosophila melanogaster CG11943-PA,
isoform A protein.
Length = 2067
Score = 28.3 bits (60), Expect = 8.3
Identities = 14/51 (27%), Positives = 22/51 (43%)
Frame = -3
Query: 318 LCLTESANSPTTIT*LCDNGESGGCFVISFLKSSTWSIMSCKTLLVFSFKL 166
L +TE N TT + + E CF+ S+W ++ +SF L
Sbjct: 280 LLVTEEPNEHTTRLPIFSDREFAECFLEELYAQSSWQAPRLNAIIAYSFGL 330
>AE014298-2944|AAN09521.1| 2090|Drosophila melanogaster CG11943-PB,
isoform B protein.
Length = 2090
Score = 28.3 bits (60), Expect = 8.3
Identities = 14/51 (27%), Positives = 22/51 (43%)
Frame = -3
Query: 318 LCLTESANSPTTIT*LCDNGESGGCFVISFLKSSTWSIMSCKTLLVFSFKL 166
L +TE N TT + + E CF+ S+W ++ +SF L
Sbjct: 303 LLVTEEPNEHTTRLPIFSDREFAECFLEELYAQSSWQAPRLNAIIAYSFGL 353
>AE013599-3968|ABC66046.1| 381|Drosophila melanogaster CG30420-PC,
isoform C protein.
Length = 381
Score = 28.3 bits (60), Expect = 8.3
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +2
Query: 293 ELADSVKQSVFQMSTDHRELHATVSRVGKSIDRH 394
E D +KQ+ Q+ +++ELH +SR+ K + +H
Sbjct: 305 EHKDLIKQNA-QLQQENQELHERISRLEKELQQH 337
>AE013599-3967|AAF47283.2| 850|Drosophila melanogaster CG30420-PA,
isoform A protein.
Length = 850
Score = 28.3 bits (60), Expect = 8.3
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +2
Query: 293 ELADSVKQSVFQMSTDHRELHATVSRVGKSIDRH 394
E D +KQ+ Q+ +++ELH +SR+ K + +H
Sbjct: 305 EHKDLIKQNA-QLQQENQELHERISRLEKELQQH 337
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,795,878
Number of Sequences: 53049
Number of extensions: 544476
Number of successful extensions: 1565
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1442
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1563
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2400202284
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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