Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0014_K02
         (593 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    25   0.56 
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    22   5.2  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    22   5.2  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    22   5.2  
AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    21   9.1  

>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 25.0 bits (52), Expect = 0.56
 Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
 Frame = +2

Query: 161 FNNLNENTSRVLQDIIDQVEDLRKEITK--QPPDSPLSQSQVMVVGELADSVKQSVFQ 328
           F  L       L D  + +  L +E+ K  Q  DSP  Q+ +M +G + +    SVF+
Sbjct: 595 FGRLTSKHDNSLYD--EYIPFLERELRKAHQEKDSPRIQTYIMALGMIGEPKILSVFE 650


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = +3

Query: 258 LHYHKVKLWLWENWL 302
           LH    K+WL  +WL
Sbjct: 220 LHLRHTKIWLRPDWL 234


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 14/55 (25%), Positives = 21/55 (38%)
 Frame = +2

Query: 89  VLSYPKPWIRVKGVEQDLDKAITKFNNLNENTSRVLQDIIDQVEDLRKEITKQPP 253
           V  Y K + +    E+ L K  T F N  +  S  +        D+ KE+    P
Sbjct: 443 VTPYNKNYTKFCSTEKRLTKQNTAFENQLQFVSDAVMAFAYAFRDMHKELCDGKP 497


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -3

Query: 168 LLNFVIALSKSCSTPFTRIH 109
           LLNF +A S     P  R+H
Sbjct: 41  LLNFFVATSPVIGEPCQRVH 60


>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +3

Query: 339 IIGSSMQQCRELANQ*TDILLENM 410
           I+ S++QQC +L      + L+NM
Sbjct: 800 ILRSNVQQCEQLEKAPNTLGLKNM 823


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,502
Number of Sequences: 438
Number of extensions: 3329
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17359926
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)