Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0014_K01
         (602 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070994-1|AAL48616.1|  262|Drosophila melanogaster RE08669p pro...   177   1e-44
AE014297-4764|AAF57167.1|  262|Drosophila melanogaster CG11522-P...   177   1e-44
AE014297-4763|AAF57166.1|  243|Drosophila melanogaster CG11522-P...   138   4e-33
BT003194-1|AAO24949.1|  371|Drosophila melanogaster RE59468p pro...    31   1.2  
AF199369-2|AAF09580.1|  318|Drosophila melanogaster MEI-P22 prot...    29   4.9  

>AY070994-1|AAL48616.1|  262|Drosophila melanogaster RE08669p
           protein.
          Length = 262

 Score =  177 bits (430), Expect = 1e-44
 Identities = 94/189 (49%), Positives = 115/189 (60%), Gaps = 1/189 (0%)
 Frame = +3

Query: 3   GTRLRFSKSRMYHKKAIYKFVGXXXXXXXXXXXXTVVVKQIGGEKNGGTRTVLLKSRKSF 182
           G  LR+SK++MY ++A+Y+                  VK+IGG KNGG RTV LK  K+ 
Sbjct: 28  GGILRYSKAQMYKRRALYRLKDKKSPVVEKAKVPIKKVKKIGGPKNGGERTVFLKKSKAS 87

Query: 183 YPTQDKIRGRSHGKSFSKHVRRTRPNLTPGTVCILLAGRHAGKRXXXXXXXXXXXXXFTG 362
           YPT+  ++ R    +FS+H R TR NLTPGTV ILLAGRH GKR              TG
Sbjct: 88  YPTKTFVKKRPSKANFSEHKRNTRRNLTPGTVLILLAGRHQGKRVVLLKVLASGLLLVTG 147

Query: 363 PFAFNACPLRRIPQRYVIGTSTKVDLGDFKLPAHLDDAYFXXXXXXXXXXXXXXQGE-DI 539
           PFA N+CPLRR+ QRYVIGTS+KVDLG FK+P HL+DAYF               GE DI
Sbjct: 148 PFALNSCPLRRVSQRYVIGTSSKVDLGAFKVPEHLNDAYF----RRLKAKKDKKTGEADI 203

Query: 540 FATKKEKYV 566
           FA KKE++V
Sbjct: 204 FAAKKERFV 212


>AE014297-4764|AAF57167.1|  262|Drosophila melanogaster CG11522-PB,
           isoform B protein.
          Length = 262

 Score =  177 bits (430), Expect = 1e-44
 Identities = 94/189 (49%), Positives = 115/189 (60%), Gaps = 1/189 (0%)
 Frame = +3

Query: 3   GTRLRFSKSRMYHKKAIYKFVGXXXXXXXXXXXXTVVVKQIGGEKNGGTRTVLLKSRKSF 182
           G  LR+SK++MY ++A+Y+                  VK+IGG KNGG RTV LK  K+ 
Sbjct: 28  GGILRYSKAQMYKRRALYRLKDKKSPVVEKAKVPIKKVKKIGGPKNGGERTVFLKKSKAS 87

Query: 183 YPTQDKIRGRSHGKSFSKHVRRTRPNLTPGTVCILLAGRHAGKRXXXXXXXXXXXXXFTG 362
           YPT+  ++ R    +FS+H R TR NLTPGTV ILLAGRH GKR              TG
Sbjct: 88  YPTKTFVKKRPSKANFSEHKRNTRRNLTPGTVLILLAGRHQGKRVVLLKVLASGLLLVTG 147

Query: 363 PFAFNACPLRRIPQRYVIGTSTKVDLGDFKLPAHLDDAYFXXXXXXXXXXXXXXQGE-DI 539
           PFA N+CPLRR+ QRYVIGTS+KVDLG FK+P HL+DAYF               GE DI
Sbjct: 148 PFALNSCPLRRVSQRYVIGTSSKVDLGAFKVPEHLNDAYF----RRLKAKKDKKTGEADI 203

Query: 540 FATKKEKYV 566
           FA KKE++V
Sbjct: 204 FAAKKERFV 212


>AE014297-4763|AAF57166.1|  243|Drosophila melanogaster CG11522-PA,
           isoform A protein.
          Length = 243

 Score =  138 bits (335), Expect = 4e-33
 Identities = 84/189 (44%), Positives = 108/189 (57%), Gaps = 1/189 (0%)
 Frame = +3

Query: 3   GTRLRFSKSRMYHKKAIYKFVGXXXXXXXXXXXXTVVVKQIGGEKNGGTRTVLLKSRKSF 182
           G  LR+SK++MY ++A+Y+               + VV++           V +K  K+ 
Sbjct: 28  GGILRYSKAQMYKRRALYRL----------KDKKSPVVEKA---------KVPIKKSKAS 68

Query: 183 YPTQDKIRGRSHGKSFSKHVRRTRPNLTPGTVCILLAGRHAGKRXXXXXXXXXXXXXFTG 362
           YPT+  ++ R    +FS+H R TR NLTPGTV ILLAGRH GKR              TG
Sbjct: 69  YPTKTFVKKRPSKANFSEHKRNTRRNLTPGTVLILLAGRHQGKRVVLLKVLASGLLLVTG 128

Query: 363 PFAFNACPLRRIPQRYVIGTSTKVDLGDFKLPAHLDDAYFXXXXXXXXXXXXXXQGE-DI 539
           PFA N+CPLRR+ QRYVIGTS+KVDLG FK+P HL+DAYF               GE DI
Sbjct: 129 PFALNSCPLRRVSQRYVIGTSSKVDLGAFKVPEHLNDAYF----RRLKAKKDKKTGEADI 184

Query: 540 FATKKEKYV 566
           FA KKE++V
Sbjct: 185 FAAKKERFV 193


>BT003194-1|AAO24949.1|  371|Drosophila melanogaster RE59468p
           protein.
          Length = 371

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 16/49 (32%), Positives = 25/49 (51%)
 Frame = -1

Query: 335 QHSNEHDTLASVSARQQNAHCAGSEVRSRPTHMFTETLAMRTTPDLVLS 189
           +H NEH  +   + R+ N++ +  +VRS P  +F        TPD  LS
Sbjct: 323 RHVNEHQGVLPFTKRKYNSYTS-LQVRSTPMPIFNHPNGFANTPDAFLS 370


>AF199369-2|AAF09580.1|  318|Drosophila melanogaster MEI-P22 protein
           protein.
          Length = 318

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 21/52 (40%), Positives = 29/52 (55%), Gaps = 6/52 (11%)
 Frame = -2

Query: 406 RCGILRRGHALKAKGPVK------SSRPLGNTPTSTTRLPACLPANRMHTVP 269
           +C   +RG   K K P K      S+  LGNTP S ++LPA  PA+ +H +P
Sbjct: 149 QCTPKKRGR--KPKQPAKKLQSRISTDQLGNTP-SPSKLPAKYPAHFVHQLP 197


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,559,262
Number of Sequences: 53049
Number of extensions: 539287
Number of successful extensions: 1279
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1202
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1274
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2462276481
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)