Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0014_J24
         (551 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT016136-1|AAV37021.1|  693|Drosophila melanogaster GH01148p pro...    28   7.3  
X77532-1|CAA54670.1|  450|Drosophila melanogaster serum response...    28   9.7  
AY095071-1|AAM11399.1|  449|Drosophila melanogaster RE17834p pro...    28   9.7  
AE013599-3853|AAF47195.1|  449|Drosophila melanogaster CG3411-PA...    28   9.7  

>BT016136-1|AAV37021.1|  693|Drosophila melanogaster GH01148p
           protein.
          Length = 693

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 26/100 (26%), Positives = 37/100 (37%)
 Frame = +3

Query: 6   RRVQTHLTNSKNQPELSVKENVVRKPWHGGRAFSNNPRLSNYTLE*ENLSPNTRCVPAAT 185
           + ++ H + S N    S +E+ VR      + F NN            L P + C+P  T
Sbjct: 558 KALRRHHSRSVNVNSNSEQESNVRHTRARSQPFRNNNNGVGGNTAMAALKPTSSCLPTGT 617

Query: 186 LENQYLGVVPSWTTTSLNIR*DCGQSTEPISCKNEKQNNS 305
                L         +LN   DCG  T   S  N   NN+
Sbjct: 618 GTAALLA-------NNLNNNNDCGIGTSGSSNNNHNNNNN 650


>X77532-1|CAA54670.1|  450|Drosophila melanogaster serum response
           factor homolog protein.
          Length = 450

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = -2

Query: 478 YGDHHR*SSGIFFRLFDKLIKGQVDET 398
           Y DHHR S G+  +  D +  G VD++
Sbjct: 118 YEDHHRSSGGLTLQGLDNVASGAVDDS 144


>AY095071-1|AAM11399.1|  449|Drosophila melanogaster RE17834p
           protein.
          Length = 449

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = -2

Query: 478 YGDHHR*SSGIFFRLFDKLIKGQVDET 398
           Y DHHR S G+  +  D +  G VD++
Sbjct: 118 YEDHHRSSGGLTLQGLDNVASGAVDDS 144


>AE013599-3853|AAF47195.1|  449|Drosophila melanogaster CG3411-PA
           protein.
          Length = 449

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = -2

Query: 478 YGDHHR*SSGIFFRLFDKLIKGQVDET 398
           Y DHHR S G+  +  D +  G VD++
Sbjct: 118 YEDHHRSSGGLTLQGLDNVASGAVDDS 144


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,779,473
Number of Sequences: 53049
Number of extensions: 536390
Number of successful extensions: 785
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 773
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 785
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2110522698
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)