Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0014_J23
         (543 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-2636|AAO41247.1|  884|Drosophila melanogaster CG5215-PB...    99   2e-21
AY118621-1|AAM49990.1| 1168|Drosophila melanogaster RE03558p pro...    28   9.5  
AE014296-813|AAF47875.2| 1168|Drosophila melanogaster CG1273-PB ...    28   9.5  

>AE014296-2636|AAO41247.1|  884|Drosophila melanogaster CG5215-PB,
            isoform B protein.
          Length = 884

 Score =   99 bits (238), Expect = 2e-21
 Identities = 50/86 (58%), Positives = 62/86 (72%)
 Frame = +1

Query: 1    RHEVEAVAGGLLLEHGPGLRDPCEKELVDALGNMPPQKREDLTASAQQFLRQIAFRQIHK 180
            R  +EA++ G L+ +GPGL DPCEK+  DAL  +  Q+REDLT SAQ FLR IAFRQI+K
Sbjct: 761  RRIMEALSSGFLI-NGPGLLDPCEKDPTDALLELTKQEREDLTVSAQLFLRYIAFRQIYK 819

Query: 181  VLDMDPLPKVKHAAGGWKYPRKRRRS 258
            VL M+PLP +K     W+  RKRRRS
Sbjct: 820  VLGMEPLPAMKFPMRPWRVNRKRRRS 845


>AY118621-1|AAM49990.1| 1168|Drosophila melanogaster RE03558p
           protein.
          Length = 1168

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 11/35 (31%), Positives = 20/35 (57%)
 Frame = +1

Query: 241 RKRRRSHTDAEPDQPNGEGKVVKTEEKADASESTT 345
           +K+ ++H D + DQP    KV + +EK + +   T
Sbjct: 716 KKKAQAHNDQKADQPEITTKVERKQEKVEVTTLAT 750


>AE014296-813|AAF47875.2| 1168|Drosophila melanogaster CG1273-PB
           protein.
          Length = 1168

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 11/35 (31%), Positives = 20/35 (57%)
 Frame = +1

Query: 241 RKRRRSHTDAEPDQPNGEGKVVKTEEKADASESTT 345
           +K+ ++H D + DQP    KV + +EK + +   T
Sbjct: 716 KKKAQAHNDQKADQPEITTKVERKQEKVEVTTLAT 750


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,484,431
Number of Sequences: 53049
Number of extensions: 354756
Number of successful extensions: 1104
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1080
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1104
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 2074444800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)