Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_J22
(490 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75714-3|CAB00060.1| 1149|Caenorhabditis elegans Hypothetical pr... 241 2e-64
Z95559-3|CAB08998.1| 786|Caenorhabditis elegans Hypothetical pr... 102 1e-22
AF045644-1|AAC02601.1| 543|Caenorhabditis elegans Hypothetical ... 28 4.2
AF026215-3|AAB71323.3| 563|Caenorhabditis elegans Hypothetical ... 28 4.2
Z50004-3|CAA90292.2| 186|Caenorhabditis elegans Hypothetical pr... 27 5.5
AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical... 27 5.5
U32305-18|AAK18852.2| 719|Caenorhabditis elegans Hypothetical p... 27 7.3
U55369-1|AAK52175.1| 1247|Caenorhabditis elegans Cystic fibrosis... 27 9.7
L23649-1|AAA27912.1| 568|Caenorhabditis elegans Hypothetical pr... 27 9.7
>Z75714-3|CAB00060.1| 1149|Caenorhabditis elegans Hypothetical
protein ZC434.5 protein.
Length = 1149
Score = 241 bits (590), Expect = 2e-64
Identities = 106/149 (71%), Positives = 126/149 (84%)
Frame = +1
Query: 43 VDDTPAEQMKAERDQKIESKNRNNSVEKNLKLWEEMKKGSDLGVQCCVRAKIDMQSMNGC 222
VDDT E M+ ER+Q+ +S+NR+N+ EKNL+LWEEMKKGS G+ CCVR KIDM+S NG
Sbjct: 287 VDDTDTETMRNEREQRQDSRNRSNTPEKNLQLWEEMKKGSPKGLTCCVRMKIDMKSNNGA 346
Query: 223 LRDPTIYRCKPETHPRTGNQYKVYPTYDFACPIVDSVEGVTHVLRTMEYHDRDPQFYWFI 402
+RDPTIYRCKPE H RTG +YKVYPTYDF CPIVDSVEGVTH LRT EYHDRD Q+Y+
Sbjct: 347 MRDPTIYRCKPEEHVRTGLKYKVYPTYDFTCPIVDSVEGVTHALRTTEYHDRDDQYYFIC 406
Query: 403 EAIGLRKPYIWEYSRLSMTNTV*STRKLT 489
+A+GLR+P+IWEY+RL+MTNTV S RKLT
Sbjct: 407 DALGLRRPHIWEYARLNMTNTVMSKRKLT 435
>Z95559-3|CAB08998.1| 786|Caenorhabditis elegans Hypothetical
protein Y41E3.4 protein.
Length = 786
Score = 102 bits (245), Expect = 1e-22
Identities = 50/127 (39%), Positives = 75/127 (59%)
Frame = +1
Query: 106 RNNSVEKNLKLWEEMKKGSDLGVQCCVRAKIDMQSMNGCLRDPTIYRCKPETHPRTGNQY 285
R +E+N++L+E+MK G + +R K+ ++ G + DP YR K H RTGNQ+
Sbjct: 382 RERPIEENIQLFEDMKNGKFDEGEATLRLKLTLEE--GKV-DPVAYRIKYVPHHRTGNQW 438
Query: 286 KVYPTYDFACPIVDSVEGVTHVLRTMEYHDRDPQFYWFIEAIGLRKPYIWEYSRLSMTNT 465
+YPTYD+ + DS+E +TH L T E+ R +YW A+ + P WEY RL++ T
Sbjct: 439 CIYPTYDYTHCLCDSIENITHSLCTKEFQSRRSSYYWLCNALDIYCPVQWEYGRLNVNYT 498
Query: 466 V*STRKL 486
V S RK+
Sbjct: 499 VVSKRKI 505
>AF045644-1|AAC02601.1| 543|Caenorhabditis elegans Hypothetical
protein F57H12.5 protein.
Length = 543
Score = 27.9 bits (59), Expect = 4.2
Identities = 25/71 (35%), Positives = 36/71 (50%)
Frame = +3
Query: 66 DEGGERSEDRKQE*K*FCREEFKTVGGNEER*RFRRTVLCSCKNRHAVYEWLFERSYYIS 245
+E ER EDRK+E K RE+ K EE+ ++ V C+ ++VY ERS
Sbjct: 130 EEKRERQEDRKEERKENKRED-KKEEKKEEKKEEKKEVRKDCR-ENSVY--FMERSDEKG 185
Query: 246 V*TRNSSTHWK 278
V ++S H K
Sbjct: 186 VKKKHSKKHSK 196
>AF026215-3|AAB71323.3| 563|Caenorhabditis elegans Hypothetical
protein F09G2.5 protein.
Length = 563
Score = 27.9 bits (59), Expect = 4.2
Identities = 17/38 (44%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Frame = -2
Query: 285 ILVSSAWMSFWFTPIYS--RISQTTIHRLHVYFCTNTA 178
+LVS +WMSFW P S RIS T L + +N A
Sbjct: 349 MLVSISWMSFWLDPRASPARISLTITSLLTLTTMSNGA 386
>Z50004-3|CAA90292.2| 186|Caenorhabditis elegans Hypothetical
protein C02B4.3 protein.
Length = 186
Score = 27.5 bits (58), Expect = 5.5
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Frame = -2
Query: 438 FPNVWLSK-SNRFYEPVKLWVSI-MVFHGTENMSHSFYRIHDGTCKIIRRVYFILVSSA 268
FP WL K +N+FYE W+ + + +E++S +F I D R+ FI+ ++A
Sbjct: 79 FPK-WLEKIANKFYENTCNWIDYSLPYISSEDVS-NFLHIRDIRLANRERLNFIIANTA 135
>AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical
protein Y116A8C.35 protein.
Length = 285
Score = 27.5 bits (58), Expect = 5.5
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +3
Query: 324 GFCRRSDSCSPYHGIP*SRPTILL 395
G CR D CS H P PT++L
Sbjct: 33 GACRHGDKCSRAHHTPTFSPTVVL 56
>U32305-18|AAK18852.2| 719|Caenorhabditis elegans Hypothetical
protein B0336.3 protein.
Length = 719
Score = 27.1 bits (57), Expect = 7.3
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +3
Query: 321 RGFCRRSDSCSPYHG 365
RG+C R D C YHG
Sbjct: 218 RGYCIRGDQCPYYHG 232
>U55369-1|AAK52175.1| 1247|Caenorhabditis elegans Cystic fibrosis
transmembrane conductanceregulator homolog protein 1
protein.
Length = 1247
Score = 26.6 bits (56), Expect = 9.7
Identities = 8/26 (30%), Positives = 16/26 (61%)
Frame = -2
Query: 306 IIRRVYFILVSSAWMSFWFTPIYSRI 229
+I R F ++ W+SFW P++ ++
Sbjct: 699 LICRFVFQALAFFWLSFWLDPVWKKV 724
>L23649-1|AAA27912.1| 568|Caenorhabditis elegans Hypothetical
protein C02C2.4 protein.
Length = 568
Score = 26.6 bits (56), Expect = 9.7
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = -1
Query: 406 LL*TSKIVGLDHGIPWYGEHESLLLQNPRWDMQNHTSGILY 284
+L +K V + HG+ +G SL+L D N T+G+++
Sbjct: 392 ILSNTKAVKVSHGVASFGSSFSLILLAFFVDCSNPTTGLIF 432
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,845,230
Number of Sequences: 27780
Number of extensions: 258541
Number of successful extensions: 733
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 717
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 732
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 914086948
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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