Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_J22
(490 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex det... 23 1.7
DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex det... 23 1.7
DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex det... 23 1.7
DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex det... 23 1.7
DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex det... 23 1.7
DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex det... 23 1.7
DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex det... 23 1.7
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 23 1.7
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 23 1.7
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 23 1.7
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 23 1.7
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 23 1.7
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 23 1.7
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 23 1.7
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 23 1.7
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 23 1.7
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 22 3.1
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 22 4.0
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 22 4.0
AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor typ... 21 5.3
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 21 7.0
>DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 23.0 bits (47), Expect = 1.7
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +1
Query: 232 PTIYRCKPETHPRTGNQY 285
P +YR +P +PR G Y
Sbjct: 135 PDMYRLRPPPNPRFGPMY 152
>DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 23.0 bits (47), Expect = 1.7
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +1
Query: 232 PTIYRCKPETHPRTGNQY 285
P +YR +P +PR G Y
Sbjct: 135 PDMYRLRPPPNPRFGPMY 152
>DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 23.0 bits (47), Expect = 1.7
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +1
Query: 232 PTIYRCKPETHPRTGNQY 285
P +YR +P +PR G Y
Sbjct: 135 PDMYRLRPPPNPRFGPMY 152
>DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 23.0 bits (47), Expect = 1.7
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +1
Query: 232 PTIYRCKPETHPRTGNQY 285
P +YR +P +PR G Y
Sbjct: 135 PDMYRLRPPPNPRFGPMY 152
>DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 23.0 bits (47), Expect = 1.7
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +1
Query: 232 PTIYRCKPETHPRTGNQY 285
P +YR +P +PR G Y
Sbjct: 135 PDMYRLRPPPNPRFGPMY 152
>DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 23.0 bits (47), Expect = 1.7
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +1
Query: 232 PTIYRCKPETHPRTGNQY 285
P +YR +P +PR G Y
Sbjct: 135 PDMYRLRPPPNPRFGPMY 152
>DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 23.0 bits (47), Expect = 1.7
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +1
Query: 232 PTIYRCKPETHPRTGNQY 285
P +YR +P +PR G Y
Sbjct: 135 PDMYRLRPPPNPRFGPMY 152
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.0 bits (47), Expect = 1.7
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +1
Query: 232 PTIYRCKPETHPRTGNQY 285
P +YR +P +PR G Y
Sbjct: 384 PDMYRLRPPPNPRFGPMY 401
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.0 bits (47), Expect = 1.7
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +1
Query: 232 PTIYRCKPETHPRTGNQY 285
P +YR +P +PR G Y
Sbjct: 384 PDMYRLRPPPNPRFGPMY 401
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.0 bits (47), Expect = 1.7
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +1
Query: 232 PTIYRCKPETHPRTGNQY 285
P +YR +P +PR G Y
Sbjct: 384 PDMYRLRPPPNPRFGPMY 401
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.0 bits (47), Expect = 1.7
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +1
Query: 232 PTIYRCKPETHPRTGNQY 285
P +YR +P +PR G Y
Sbjct: 384 PDMYRLRPPPNPRFGPMY 401
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.0 bits (47), Expect = 1.7
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +1
Query: 232 PTIYRCKPETHPRTGNQY 285
P +YR +P +PR G Y
Sbjct: 384 PDMYRLRPPPNPRFGPMY 401
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.0 bits (47), Expect = 1.7
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +1
Query: 232 PTIYRCKPETHPRTGNQY 285
P +YR +P +PR G Y
Sbjct: 384 PDMYRLRPPPNPRFGPMY 401
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 23.0 bits (47), Expect = 1.7
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +1
Query: 232 PTIYRCKPETHPRTGNQY 285
P +YR +P +PR G Y
Sbjct: 383 PDMYRLRPPPNPRFGPMY 400
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 23.0 bits (47), Expect = 1.7
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +1
Query: 232 PTIYRCKPETHPRTGNQY 285
P +YR +P +PR G Y
Sbjct: 368 PDMYRLRPPPNPRFGPMY 385
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 23.0 bits (47), Expect = 1.7
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +1
Query: 232 PTIYRCKPETHPRTGNQY 285
P +YR +P +PR G Y
Sbjct: 384 PDMYRLRPPPNPRFGPMY 401
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 22.2 bits (45), Expect = 3.1
Identities = 6/14 (42%), Positives = 10/14 (71%)
Frame = -2
Query: 285 ILVSSAWMSFWFTP 244
++V +W+SFW P
Sbjct: 257 LIVIMSWVSFWIKP 270
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 21.8 bits (44), Expect = 4.0
Identities = 6/15 (40%), Positives = 10/15 (66%)
Frame = +1
Query: 241 YRCKPETHPRTGNQY 285
+RC+ THP+ G +
Sbjct: 350 FRCEVSTHPQAGPHF 364
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 21.8 bits (44), Expect = 4.0
Identities = 6/15 (40%), Positives = 10/15 (66%)
Frame = +1
Query: 241 YRCKPETHPRTGNQY 285
+RC+ THP+ G +
Sbjct: 350 FRCEVSTHPQAGPHF 364
>AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor type
D2 protein.
Length = 456
Score = 21.4 bits (43), Expect = 5.3
Identities = 7/18 (38%), Positives = 9/18 (50%)
Frame = +1
Query: 241 YRCKPETHPRTGNQYKVY 294
+RCKP +G Y Y
Sbjct: 421 FRCKPSQRFASGRYYSAY 438
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 21.0 bits (42), Expect = 7.0
Identities = 5/14 (35%), Positives = 10/14 (71%)
Frame = -2
Query: 285 ILVSSAWMSFWFTP 244
++V +W++FW P
Sbjct: 226 LIVVMSWIAFWIKP 239
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,867
Number of Sequences: 438
Number of extensions: 3433
Number of successful extensions: 21
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13421061
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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