Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_J21
(488 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY089648-1|AAL90386.1| 252|Drosophila melanogaster RH04903p pro... 143 1e-34
AE014134-1774|AAF52868.1| 252|Drosophila melanogaster CG4897-PA... 143 1e-34
X15109-1|CAA33207.1| 239|Drosophila melanogaster ribosomal pro... 135 4e-32
BT028802-1|ABI34183.1| 227|Drosophila melanogaster LP23547p pro... 50 2e-06
BT001868-1|AAN71638.1| 538|Drosophila melanogaster SD03344p pro... 31 0.64
AY061209-1|AAL28757.1| 538|Drosophila melanogaster LD15705p pro... 31 0.64
AE014297-3719|AAZ52545.1| 538|Drosophila melanogaster CG33095-P... 31 0.64
AE014297-3718|AAF56400.2| 538|Drosophila melanogaster CG33095-P... 31 0.64
AE014297-4130|AAF56715.1| 448|Drosophila melanogaster CG13972-P... 31 1.1
AE014298-1829|AAN09643.1| 381|Drosophila melanogaster CG32642-P... 29 4.5
AE014134-1652|AAF52785.1| 417|Drosophila melanogaster CG13114-P... 29 4.5
AE014134-138|AAF51469.2| 826|Drosophila melanogaster CG2839-PA ... 28 7.9
>AY089648-1|AAL90386.1| 252|Drosophila melanogaster RH04903p
protein.
Length = 252
Score = 143 bits (346), Expect = 1e-34
Identities = 74/136 (54%), Positives = 92/136 (67%)
Frame = +1
Query: 79 PVKGKEDSKKLPAVPESVXXXXXXXXXXXXXXXQITLKRRSASIKKRKEIFKRAEQYVKE 258
PV K +KKLPAVPES + LK+ + ++KE RAE+Y E
Sbjct: 4 PVVKKPAAKKLPAVPESKLKFSKKQISKRVAESKRRLKKAAVIALRKKENLVRAEKYQNE 63
Query: 259 YRIKERDEIRLARQARNRGNYYVPGEAKLAFVIRIRGVNQVSPKVRKVLQLFRLRQIXNG 438
Y E+ EI+L R A+ R +YVP EAKLAFV+RIRG+N+V+PKVRKVLQLFRLRQI NG
Sbjct: 64 YIKAEQREIKLRRLAKKRNQFYVPAEAKLAFVVRIRGINKVAPKVRKVLQLFRLRQINNG 123
Query: 439 VFVRLNNATVNMLRIA 486
VF++LN AT+NMLRIA
Sbjct: 124 VFIKLNKATINMLRIA 139
>AE014134-1774|AAF52868.1| 252|Drosophila melanogaster CG4897-PA
protein.
Length = 252
Score = 143 bits (346), Expect = 1e-34
Identities = 74/136 (54%), Positives = 92/136 (67%)
Frame = +1
Query: 79 PVKGKEDSKKLPAVPESVXXXXXXXXXXXXXXXQITLKRRSASIKKRKEIFKRAEQYVKE 258
PV K +KKLPAVPES + LK+ + ++KE RAE+Y E
Sbjct: 4 PVVKKPAAKKLPAVPESKLKFSKKQISKRVAESKRRLKKAAVIALRKKENLVRAEKYQNE 63
Query: 259 YRIKERDEIRLARQARNRGNYYVPGEAKLAFVIRIRGVNQVSPKVRKVLQLFRLRQIXNG 438
Y E+ EI+L R A+ R +YVP EAKLAFV+RIRG+N+V+PKVRKVLQLFRLRQI NG
Sbjct: 64 YIKAEQREIKLRRLAKKRNQFYVPAEAKLAFVVRIRGINKVAPKVRKVLQLFRLRQINNG 123
Query: 439 VFVRLNNATVNMLRIA 486
VF++LN AT+NMLRIA
Sbjct: 124 VFIKLNKATINMLRIA 139
>X15109-1|CAA33207.1| 239|Drosophila melanogaster ribosomal
protein protein.
Length = 239
Score = 135 bits (326), Expect = 4e-32
Identities = 69/126 (54%), Positives = 86/126 (68%)
Frame = +1
Query: 109 LPAVPESVXXXXXXXXXXXXXXXQITLKRRSASIKKRKEIFKRAEQYVKEYRIKERDEIR 288
LPAVPES + LK+ + ++KE RAE+Y EY E+ EI+
Sbjct: 1 LPAVPESKLKFSKKQISKRVAESKRRLKKAAVIALRKKENLVRAEKYQNEYIKAEQREIK 60
Query: 289 LARQARNRGNYYVPGEAKLAFVIRIRGVNQVSPKVRKVLQLFRLRQIXNGVFVRLNNATV 468
L R A+ R +YVP EAKLAFV+RIRG+N+V+PKVRKVLQLFRLRQI NGVF++LN AT+
Sbjct: 61 LRRLAKKRNQFYVPAEAKLAFVVRIRGINKVAPKVRKVLQLFRLRQINNGVFIKLNKATI 120
Query: 469 NMLRIA 486
NMLRIA
Sbjct: 121 NMLRIA 126
>BT028802-1|ABI34183.1| 227|Drosophila melanogaster LP23547p
protein.
Length = 227
Score = 49.6 bits (113), Expect = 2e-06
Identities = 28/83 (33%), Positives = 39/83 (46%)
Frame = -3
Query: 483 DTKHVHCGIVETNEHAVXDLTQPEXXXXXXXXXXXLVDTTNTDDKC*FSFTGHIIIATVT 304
D +HV G+V+ +EH V DL Q E LVDT +TDDK F GH+ + +
Sbjct: 59 DAQHVDGGLVQLDEHTVVDLPQTEQLQNLADLGSHLVDTADTDDKGQFGLGGHVELVALL 118
Query: 303 SLSCQSDFITLLDAVFFDILFGS 235
+ Q D V +L G+
Sbjct: 119 GQATQLDLALFRLDVLILVLLGA 141
>BT001868-1|AAN71638.1| 538|Drosophila melanogaster SD03344p
protein.
Length = 538
Score = 31.5 bits (68), Expect = 0.64
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Frame = +2
Query: 155 RHSELAVFRSHSRGVPLPLRRGKKSLREP---NNMSKNTASRSVMKSDWQDRLVTVAIIM 325
RHS L++ +PL +RR + +REP N+S + + R+V K D V A ++
Sbjct: 422 RHSSLSIPTQSKDELPLNIRRLSEQIREPPLEKNISLSLSDRNVSKIPTSDG-VGEAHLV 480
Query: 326 CPVKLN-*HLSSVFVVSTKYH 385
P K++ H+S V + H
Sbjct: 481 APHKMDKFHVSRDAAVQSTSH 501
>AY061209-1|AAL28757.1| 538|Drosophila melanogaster LD15705p
protein.
Length = 538
Score = 31.5 bits (68), Expect = 0.64
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Frame = +2
Query: 155 RHSELAVFRSHSRGVPLPLRRGKKSLREP---NNMSKNTASRSVMKSDWQDRLVTVAIIM 325
RHS L++ +PL +RR + +REP N+S + + R+V K D V A ++
Sbjct: 422 RHSSLSIPTQSKDELPLNIRRLSEQIREPPLEKNISLSLSDRNVSKIPTSDG-VGEAHLV 480
Query: 326 CPVKLN-*HLSSVFVVSTKYH 385
P K++ H+S V + H
Sbjct: 481 APHKMDKFHVSRDAAVQSTSH 501
>AE014297-3719|AAZ52545.1| 538|Drosophila melanogaster CG33095-PB,
isoform B protein.
Length = 538
Score = 31.5 bits (68), Expect = 0.64
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Frame = +2
Query: 155 RHSELAVFRSHSRGVPLPLRRGKKSLREP---NNMSKNTASRSVMKSDWQDRLVTVAIIM 325
RHS L++ +PL +RR + +REP N+S + + R+V K D V A ++
Sbjct: 422 RHSSLSIPTQSKDELPLNIRRLSEQIREPPLEKNISLSLSDRNVSKIPTSDG-VGEAHLV 480
Query: 326 CPVKLN-*HLSSVFVVSTKYH 385
P K++ H+S V + H
Sbjct: 481 APHKMDKFHVSRDAAVQSTSH 501
>AE014297-3718|AAF56400.2| 538|Drosophila melanogaster CG33095-PA,
isoform A protein.
Length = 538
Score = 31.5 bits (68), Expect = 0.64
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Frame = +2
Query: 155 RHSELAVFRSHSRGVPLPLRRGKKSLREP---NNMSKNTASRSVMKSDWQDRLVTVAIIM 325
RHS L++ +PL +RR + +REP N+S + + R+V K D V A ++
Sbjct: 422 RHSSLSIPTQSKDELPLNIRRLSEQIREPPLEKNISLSLSDRNVSKIPTSDG-VGEAHLV 480
Query: 326 CPVKLN-*HLSSVFVVSTKYH 385
P K++ H+S V + H
Sbjct: 481 APHKMDKFHVSRDAAVQSTSH 501
>AE014297-4130|AAF56715.1| 448|Drosophila melanogaster CG13972-PA
protein.
Length = 448
Score = 30.7 bits (66), Expect = 1.1
Identities = 12/38 (31%), Positives = 24/38 (63%)
Frame = +1
Query: 178 QITLKRRSASIKKRKEIFKRAEQYVKEYRIKERDEIRL 291
++ + + ++K KEI++ YV+EYR ++ +E RL
Sbjct: 367 ELRILEQKKLLQKHKEIYEERMTYVQEYRAQKEEEQRL 404
>AE014298-1829|AAN09643.1| 381|Drosophila melanogaster CG32642-PC
protein.
Length = 381
Score = 28.7 bits (61), Expect = 4.5
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -2
Query: 148 FYGASRLIPEQLATSYCPLYPSQVFSRPQPSF 53
F G LI L SYCP YP + + P P++
Sbjct: 85 FAGKKELIQTDL--SYCPSYPPRPYGPPAPAY 114
>AE014134-1652|AAF52785.1| 417|Drosophila melanogaster CG13114-PA
protein.
Length = 417
Score = 28.7 bits (61), Expect = 4.5
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = -2
Query: 160 VPPSFYGASRLIPEQL-ATSYCPLYPSQVFSRPQPSFL*SQPS 35
V P+ G S L P ATS P+YP+ + P P+ +QPS
Sbjct: 39 VAPTTTGGSTLSPPTTSATSPGPIYPTTTSAPPTPTDYTTQPS 81
>AE014134-138|AAF51469.2| 826|Drosophila melanogaster CG2839-PA
protein.
Length = 826
Score = 27.9 bits (59), Expect = 7.9
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +1
Query: 178 QITLKRRSASIKKRKEIFKRAEQYVKEYRIKERDEIRLARQARNR 312
+I K RS +KRKE +R E+ K ++R+E R + R R
Sbjct: 282 RIMEKERSKEEEKRKEEERRREEERKREEERKREEERKREEERKR 326
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,103,075
Number of Sequences: 53049
Number of extensions: 413870
Number of successful extensions: 1046
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1032
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1044
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1726192251
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -