Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_J20
(493 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_03_0277 + 14496298-14496300,14496875-14496952,14497061-144972... 204 2e-53
02_01_0047 - 316960-317397,317647-317744,317837-318017,318122-31... 203 5e-53
05_04_0058 + 17548945-17548947,17549234-17549281,17549618-175496... 197 3e-51
10_07_0065 - 12527642-12528178,12531443-12531718 31 0.38
01_06_1450 + 37448664-37448936,37449643-37449885 31 0.50
04_04_0872 + 28903099-28903644,28903739-28904544,28904620-28905004 31 0.66
03_05_0145 + 21254448-21255488 29 1.5
10_01_0099 - 1202668-1203023,1203097-1206037 29 2.0
06_03_0478 - 21259376-21259465,21259862-21259924,21260025-212600... 29 2.0
01_05_0755 - 24941711-24942167,24942591-24942719,24942840-24943264 29 2.0
01_05_0674 - 24187820-24188713,24188809-24189204 29 2.0
12_01_0448 + 3537661-3538018,3538920-3539047,3539740-3539763,354... 29 2.7
01_06_1283 - 35977646-35978703,35980177-35980272,35980627-35980759 29 2.7
10_08_0510 + 18430580-18431781,18433176-18433554 28 3.5
10_08_0509 + 18419815-18422150,18422249-18422291,18423154-184234... 28 3.5
04_01_0393 - 5154558-5154857,5155008-5155072,5158734-5159047,515... 28 3.5
03_01_0384 - 2985250-2985562,2985797-2986118,2986230-2986362 28 3.5
01_06_0565 + 30287253-30287502,30287522-30289010,30289133-302892... 28 3.5
12_02_0735 - 22636835-22639502,22639755-22640734 28 4.7
08_02_0582 + 18993816-18993890,18994050-18994446,18995645-189957... 28 4.7
06_01_0906 + 6990892-6991615,6992480-6992679,6992822-6993002,699... 28 4.7
06_01_0083 - 659510-661267,661577-662384,662700-663646 28 4.7
11_01_0385 + 2915532-2916482 27 6.2
06_03_0876 - 25593744-25594046,25594747-25594902,25594986-255950... 27 6.2
05_03_0142 - 8866316-8866608,8867652-8867886,8868801-8869076,886... 27 6.2
03_03_0025 + 13848450-13849420,13850921-13851131,13851327-138514... 27 6.2
02_05_0910 - 32684836-32685259,32685911-32685987,32686179-32686421 27 6.2
02_04_0236 - 21170753-21170794,21171089-21172220,21172332-211726... 27 6.2
01_05_0710 + 24492337-24493053 27 6.2
01_01_0062 + 497728-497922,499444-499481,499576-499598,501156-50... 27 6.2
10_07_0104 - 12907816-12908301 27 8.2
09_02_0328 - 7293547-7293855,7294161-7294274,7294348-7294429,729... 27 8.2
08_01_0994 + 10071081-10072163,10072704-10074530,10074977-10075054 27 8.2
06_01_0866 + 6582131-6583294 27 8.2
05_03_0415 - 13661745-13664240,13664376-13664401,13665018-136650... 27 8.2
05_03_0265 - 11293020-11293329,11293911-11294232,11294332-11294455 27 8.2
04_04_1483 - 33907259-33907383,33909295-33909848,33909891-33909916 27 8.2
04_04_1302 - 32482764-32483447,32483546-32484109 27 8.2
03_04_0152 + 17740643-17741407 27 8.2
03_03_0282 - 16191487-16191975 27 8.2
01_06_1291 + 36032088-36032299,36032737-36033314,36034494-36036229 27 8.2
01_01_1174 + 9348256-9349734 27 8.2
>01_03_0277 +
14496298-14496300,14496875-14496952,14497061-14497241,
14497348-14497445,14497542-14497979
Length = 265
Score = 204 bits (499), Expect = 2e-53
Identities = 90/140 (64%), Positives = 114/140 (81%)
Frame = +2
Query: 8 KLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLC 187
KLCKVR V G K +PYL T+DGRT+RYPDPLIK ND++++D+ TNKI+DFIKFD GN+
Sbjct: 122 KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKIDLETNKIVDFIKFDVGNVV 181
Query: 188 MITGGRNLGRVGTIVSRERHPGSFDIVHVKDSTGHTFATRLNNVFIIGKGTKAYISLPRG 367
M+TGGRN GRVG I +RE+H GSF+ +HV+D+ GH FATRL NVF IGKG K ++SLP+G
Sbjct: 182 MVTGGRNTGRVGVIKNREKHKGSFETIHVEDALGHAFATRLGNVFTIGKGNKPWVSLPKG 241
Query: 368 KGVRLTIAEERDKRIAAKVA 427
KG++L+I EE+ KR AA A
Sbjct: 242 KGIKLSIIEEQRKRDAAAQA 261
>02_01_0047 -
316960-317397,317647-317744,317837-318017,318122-318199,
319023-319025
Length = 265
Score = 203 bits (496), Expect = 5e-53
Identities = 89/140 (63%), Positives = 114/140 (81%)
Frame = +2
Query: 8 KLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLC 187
KLCKVR V G K +PYL T+DGRT+RYPDP+IK ND++++D+ TNKI+DFIKFD GN+
Sbjct: 122 KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPIIKANDTIKIDLETNKIVDFIKFDVGNVV 181
Query: 188 MITGGRNLGRVGTIVSRERHPGSFDIVHVKDSTGHTFATRLNNVFIIGKGTKAYISLPRG 367
M+TGGRN GRVG I +RE+H GSF+ +HV+D+ GH FATRL NVF IGKG K ++SLP+G
Sbjct: 182 MVTGGRNTGRVGVIKNREKHKGSFETIHVEDALGHQFATRLGNVFTIGKGNKPWVSLPKG 241
Query: 368 KGVRLTIAEERDKRIAAKVA 427
KG++L+I EE+ KR AA A
Sbjct: 242 KGIKLSIIEEQRKRDAAAQA 261
>05_04_0058 +
17548945-17548947,17549234-17549281,17549618-17549695,
17549952-17550132,17550223-17550320,17550827-17551258
Length = 279
Score = 197 bits (481), Expect = 3e-51
Identities = 87/140 (62%), Positives = 111/140 (79%)
Frame = +2
Query: 8 KLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLC 187
KLCKVR V G K +P+L T+DGRT+RYPDPLIK ND++++D+ TNKI+DFIKFD GN+
Sbjct: 138 KLCKVRSVQFGQKGIPFLNTNDGRTIRYPDPLIKANDTIKIDLETNKIVDFIKFDVGNIV 197
Query: 188 MITGGRNLGRVGTIVSRERHPGSFDIVHVKDSTGHTFATRLNNVFIIGKGTKAYISLPRG 367
M+TGGRN GRVG I SRE+H GSF+ +HV+D+ GH FATR+ NVF IGK K ++SLP+G
Sbjct: 198 MVTGGRNTGRVGVIKSREKHKGSFETIHVEDALGHQFATRMGNVFTIGKERKPWVSLPKG 257
Query: 368 KGVRLTIAEERDKRIAAKVA 427
KG++L+I EE KR A A
Sbjct: 258 KGIKLSIIEEARKRNAEAAA 277
>10_07_0065 - 12527642-12528178,12531443-12531718
Length = 270
Score = 31.5 bits (68), Expect = 0.38
Identities = 20/56 (35%), Positives = 24/56 (42%)
Frame = -1
Query: 289 PGGVLDVHDVEGAGVALARDDGADATQIPAAGDHAEVAGVELDEVHDLVGGDVELH 122
P G V V A A DDGA A + PA G+ A V +E GD +H
Sbjct: 191 PAGGAVVELVRAAARAGRDDDGARARRRPAGGEEGVAAAVRGEEKSQAARGDGAVH 246
>01_06_1450 + 37448664-37448936,37449643-37449885
Length = 171
Score = 31.1 bits (67), Expect = 0.50
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +1
Query: 286 RAHVRDQVKQRVHNRQGHEGVHLPPAREGSAPHHRGGA 399
RA R QV++ +H R+ +GV PP P GGA
Sbjct: 6 RAAARTQVERLLHPREPRDGVREPPRERVGEPTAGGGA 43
>04_04_0872 + 28903099-28903644,28903739-28904544,28904620-28905004
Length = 578
Score = 30.7 bits (66), Expect = 0.66
Identities = 25/75 (33%), Positives = 33/75 (44%), Gaps = 3/75 (4%)
Frame = -1
Query: 364 AREGDV---RLRALADYEHVV*PGRERVPGGVLDVHDVEGAGVALARDDGADATQIPAAG 194
AR GD R ++ ++ + P R R P L H VEG V + +PA
Sbjct: 110 ARRGDFSMFRTKSTLSKQNSLLPSRIREPDLELPPH-VEGPSVGRQGGEDPLNKSVPAGR 168
Query: 193 DHAEVAGVELDEVHD 149
A + G ELDEV D
Sbjct: 169 YFAALRGPELDEVRD 183
>03_05_0145 + 21254448-21255488
Length = 346
Score = 29.5 bits (63), Expect = 1.5
Identities = 15/41 (36%), Positives = 18/41 (43%)
Frame = +1
Query: 16 QGAARRDRPQERAVPGDARRAHAPVPGPAHQGERLGAARHL 138
+G ARR P++R A A P PA R G HL
Sbjct: 117 KGRARRRTPEQRRPKEAAGNGRARSPSPASAQRRYGGGEHL 157
>10_01_0099 - 1202668-1203023,1203097-1206037
Length = 1098
Score = 29.1 bits (62), Expect = 2.0
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +2
Query: 80 TLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLCMIT 196
T R PD + ++ LD+S N + I GNL MIT
Sbjct: 123 TGRMPDEISELQRLTMLDLSYNNLTGHIPASVGNLTMIT 161
>06_03_0478 -
21259376-21259465,21259862-21259924,21260025-21260066,
21260180-21260461,21261084-21261587,21261973-21261981,
21262122-21262196,21262375-21262449,21262557-21263494,
21263577-21263607,21263694-21263979,21264691-21264905,
21265329-21265437,21265556-21265611,21265730-21265822,
21266348-21266393,21266496-21267221,21267489-21267550,
21267738-21268013,21268604-21268735,21268835-21268909
Length = 1394
Score = 29.1 bits (62), Expect = 2.0
Identities = 18/69 (26%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
Frame = +1
Query: 7 EAVQGAARRDRPQERAVPGDARRAHAP--VPGPAHQGERLGAARHLHQQDHGLHQV-RLR 177
E ++ ++R ++R P D+RR H P PG + + A + L + V R R
Sbjct: 367 ERLRERRMKERERDRKHPADSRREHTPPRTPGDRRRSSSVRAEKPLRRPSPRRDAVHRHR 426
Query: 178 QPLHDHRRQ 204
P+ + +R+
Sbjct: 427 SPVKEIKRE 435
>01_05_0755 - 24941711-24942167,24942591-24942719,24942840-24943264
Length = 336
Score = 29.1 bits (62), Expect = 2.0
Identities = 23/62 (37%), Positives = 30/62 (48%), Gaps = 4/62 (6%)
Frame = -1
Query: 304 GRERVPGGVLDVHDVEGAGV-ALARDDGADATQIPAAGD---HAEVAGVELDEVHDLVGG 137
GR GV+ DV+G + A+A D GA+ T A D E G+ELDE +
Sbjct: 256 GRAAAGEGVVKCEDVDGNELSAMAADGGAEDTAAAADDDGELWPEGMGLELDEFLGPMDD 315
Query: 136 DV 131
DV
Sbjct: 316 DV 317
>01_05_0674 - 24187820-24188713,24188809-24189204
Length = 429
Score = 29.1 bits (62), Expect = 2.0
Identities = 15/43 (34%), Positives = 19/43 (44%)
Frame = +1
Query: 22 AARRDRPQERAVPGDARRAHAPVPGPAHQGERLGAARHLHQQD 150
AA R P A A AP P P+HQ ++ +RH D
Sbjct: 149 AANRRAPAAAAKHRPAADQFAPPPAPSHQWAKIKRSRHATDHD 191
>12_01_0448 +
3537661-3538018,3538920-3539047,3539740-3539763,
3542051-3542317,3542994-3543530
Length = 437
Score = 28.7 bits (61), Expect = 2.7
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Frame = +1
Query: 100 AHQGERLGAARHLHQQDHGLHQVR--LRQPLH 189
A QGE GAAR +HQ+ G R +RQ LH
Sbjct: 399 AAQGELAGAARQVHQRRRGRRGQRGHVRQELH 430
>01_06_1283 -
35977646-35978703,35980177-35980272,35980627-35980759
Length = 428
Score = 28.7 bits (61), Expect = 2.7
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +1
Query: 13 VQGAARRDRPQERAVPGDARRAHAPVPG 96
++GA RR R E+A+P + AP PG
Sbjct: 4 LRGAKRRKRQPEKALPAAGQAMPAPAPG 31
>10_08_0510 + 18430580-18431781,18433176-18433554
Length = 526
Score = 28.3 bits (60), Expect = 3.5
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = -2
Query: 153 MILLVEMSSCTESFTLMSGSGYRSVRPSCVTRYGTLLGPVATRRTL 16
M L + CTE+ + R ++P +T YGTLL AT+ L
Sbjct: 193 MDYLCKNGRCTEARKIFDSMTKRGLKPD-ITTYGTLLQGYATKGAL 237
>10_08_0509 +
18419815-18422150,18422249-18422291,18423154-18423487,
18423766-18423878,18424461-18424589,18424771-18424864,
18424967-18425050,18425859-18426047,18426897-18427017,
18427476-18427692
Length = 1219
Score = 28.3 bits (60), Expect = 3.5
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = -2
Query: 153 MILLVEMSSCTESFTLMSGSGYRSVRPSCVTRYGTLLGPVATRRTL 16
M L + CTE+ + R ++P +T YGTLL AT+ L
Sbjct: 311 MDYLCKNGRCTEARKMFDSMTKRGLKPE-ITTYGTLLQGYATKGAL 355
>04_01_0393 -
5154558-5154857,5155008-5155072,5158734-5159047,
5159148-5159338
Length = 289
Score = 28.3 bits (60), Expect = 3.5
Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Frame = +2
Query: 134 ISTNKIMD-FIKFDSGNLCMITGGRNLGRVGTIVSRERH-PG-SFDIVHV 274
I NK++D F FD + + GG G + I+SR +H G +FD+ HV
Sbjct: 111 IVINKLLDRFHGFDGVGVLVDVGGGTGGTLEMIMSRHKHITGVNFDLPHV 160
>03_01_0384 - 2985250-2985562,2985797-2986118,2986230-2986362
Length = 255
Score = 28.3 bits (60), Expect = 3.5
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = -3
Query: 395 PPRW*GALPSRAGGRCTPSCP 333
PP W ALPS +GG C P P
Sbjct: 108 PPNW--ALPSNSGGWCNPPRP 126
>01_06_0565 +
30287253-30287502,30287522-30289010,30289133-30289277,
30289679-30289729
Length = 644
Score = 28.3 bits (60), Expect = 3.5
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = -3
Query: 422 PSLRCACPAPPRW*GALPSRAGGRCTPSCPC 330
PS C+ P P G P+ GG +PS PC
Sbjct: 408 PSTPCSAPPSPSS-GTSPTTPGGGYSPSTPC 437
>12_02_0735 - 22636835-22639502,22639755-22640734
Length = 1215
Score = 27.9 bits (59), Expect = 4.7
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -2
Query: 336 PLPIMNTLFNLVANVCPVESLTCTMSKEPG 247
PL NT+ +++A PVE L C +S + G
Sbjct: 425 PLVTANTILSILAADYPVEKLACYLSDDGG 454
>08_02_0582 +
18993816-18993890,18994050-18994446,18995645-18995748,
18995863-18996004,18996118-18996237,18996341-18996465,
18996903-18997061,18997161-18997323,18997420-18997545,
18997628-18997711,18997761-18998173,18998199-18998273,
18998463-18998663,18998862-18998971,18999072-18999156,
18999365-18999493,18999596-18999701,18999825-18999913,
19000064-19000366
Length = 1001
Score = 27.9 bits (59), Expect = 4.7
Identities = 14/33 (42%), Positives = 16/33 (48%), Gaps = 2/33 (6%)
Frame = -3
Query: 419 SLRCACPAPPRW*GA--LPSRAGGRCTPSCPCR 327
+L CA PAPPRW +P TP P R
Sbjct: 96 ALSCAVPAPPRWPAVTQVPDEPYRALTPVHPAR 128
>06_01_0906 +
6990892-6991615,6992480-6992679,6992822-6993002,
6993855-6994046,6994492-6994724,6995537-6995638,
6995776-6995826,6996234-6996338,6997287-6997353,
6997946-6997962
Length = 623
Score = 27.9 bits (59), Expect = 4.7
Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +1
Query: 10 AVQGAARRDRPQERAVPGDARRA-HAPVPGPAHQGERLGAA 129
A +G R+ R P DA A HAP P P +G + GAA
Sbjct: 98 APRGRGRKSRRGRPEPPSDAGAAPHAP-PSPPRRGAKKGAA 137
>06_01_0083 - 659510-661267,661577-662384,662700-663646
Length = 1170
Score = 27.9 bits (59), Expect = 4.7
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = -2
Query: 336 PLPIMNTLFNLVANVCPVESLTCTMSKEPG 247
PL NT+ +++A PVE L+C +S + G
Sbjct: 414 PLVTANTILSILAADYPVEKLSCYVSDDGG 443
>11_01_0385 + 2915532-2916482
Length = 316
Score = 27.5 bits (58), Expect = 6.2
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +1
Query: 355 PPAREGSAPHHRGGAGQA 408
PPA E ++PHH GG A
Sbjct: 153 PPAPEAASPHHGGGENPA 170
>06_03_0876 -
25593744-25594046,25594747-25594902,25594986-25595095,
25595429-25595520,25595613-25595657,25595775-25595920,
25596027-25596114,25596251-25596281,25596388-25596413,
25596617-25596939
Length = 439
Score = 27.5 bits (58), Expect = 6.2
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +3
Query: 378 ASPSRRSGTSASQRRSPDSSATYT 449
+SPSR S +S S RRS ++AT T
Sbjct: 413 SSPSRPSSSSCSSRRSSTAAATAT 436
>05_03_0142 -
8866316-8866608,8867652-8867886,8868801-8869076,
8869166-8869292,8869869-8870116,8870189-8871104,
8871980-8872086,8872562-8872930
Length = 856
Score = 27.5 bits (58), Expect = 6.2
Identities = 12/38 (31%), Positives = 27/38 (71%)
Frame = -2
Query: 219 TRPRFLPPVIMQRLPESNLMKSMILLVEMSSCTESFTL 106
++PR PP++ +R P+++L + ++ L + SS + SF++
Sbjct: 22 SQPRSPPPLLARRPPKTSLSQQLLRL-DASSSSSSFSV 58
>03_03_0025 +
13848450-13849420,13850921-13851131,13851327-13851459,
13851576-13851832
Length = 523
Score = 27.5 bits (58), Expect = 6.2
Identities = 27/138 (19%), Positives = 46/138 (33%)
Frame = +1
Query: 1 AEEAVQGAARRDRPQERAVPGDARRAHAPVPGPAHQGERLGAARHLHQQDHGLHQVRLRQ 180
A + G +R R ++ + + AP P P+ + E L RH+ +
Sbjct: 115 APASSSGGSRLARRPKKGILKAQSSSSAPPPPPSPEVELLRRRRHV-----SISLPDDDD 169
Query: 181 PLHDHRRQESGSXXXXXXXXXXXXXXXXXXXQGLHRAHVRDQVKQRVHNRQGHEGVHLPP 360
+ H R+ S S G R+ + + H +Q +
Sbjct: 170 EIAPHHRRNSSSSSSSASARLVTRPAAATSGSGRWRSVFGAVWEHQNHYQQRRQKQKQKQ 229
Query: 361 AREGSAPHHRGGAGQAHR 414
RE + HR +G A R
Sbjct: 230 EREQATARHRSSSGAARR 247
>02_05_0910 - 32684836-32685259,32685911-32685987,32686179-32686421
Length = 247
Score = 27.5 bits (58), Expect = 6.2
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = +1
Query: 349 HLPPAREGSAPHHRGGAGQAHRSEGRRTVA 438
HL R S RGGAGQ R+E R+ A
Sbjct: 195 HLGKGRMRSVTGGRGGAGQLGRTEPRKNTA 224
>02_04_0236 -
21170753-21170794,21171089-21172220,21172332-21172601,
21173043-21173305,21173406-21173492,21174149-21174326,
21174784-21174984,21175769-21176025
Length = 809
Score = 27.5 bits (58), Expect = 6.2
Identities = 24/67 (35%), Positives = 32/67 (47%), Gaps = 10/67 (14%)
Frame = -2
Query: 402 SRSSAMVRRTPFPRGREMYAFVPL---PIMNTLFNLV---ANVCPVESLTCTMSK----E 253
S S A++R GR A PL MNT + ANVCP+ESL + + +
Sbjct: 35 SSSGALLRYNDSGGGRSGSAGEPLLRKRTMNTTSQIAIVGANVCPIESLDYEVVENDLFK 94
Query: 252 PGWRSRE 232
WRSR+
Sbjct: 95 QDWRSRK 101
>01_05_0710 + 24492337-24493053
Length = 238
Score = 27.5 bits (58), Expect = 6.2
Identities = 20/61 (32%), Positives = 30/61 (49%)
Frame = -2
Query: 204 LPPVIMQRLPESNLMKSMILLVEMSSCTESFTLMSGSGYRSVRPSCVTRYGTLLGPVATR 25
L P +RLP S L L M + T +F L++ + +RPS + LLG + +R
Sbjct: 76 LLPGSTERLPFSPLAAH---LASMPTLTPAFALLTAIRHHPLRPSPLPLATPLLGHLLSR 132
Query: 24 R 22
R
Sbjct: 133 R 133
>01_01_0062 +
497728-497922,499444-499481,499576-499598,501156-501262,
501356-501407,501475-501559,501910-502000,502251-502289,
502383-502455,503285-503344,503439-503512,503606-503698,
503779-503880,504048-504128,504352-504426,504486-504614,
504705-504809
Length = 473
Score = 27.5 bits (58), Expect = 6.2
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = -1
Query: 436 LLSGDLRCDALVPLLRDGEAHSLPAREGDVRLRALADYEHVV 311
LLS D CD P+ + +H LPA D +R A +V
Sbjct: 399 LLSQDFGCDEKFPITDERVSHLLPAYNQDRIVRVYAKKHELV 440
>10_07_0104 - 12907816-12908301
Length = 161
Score = 27.1 bits (57), Expect = 8.2
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
Frame = -3
Query: 464 IYIN*RISSATVRRPSLRCACPAPPRW*G---ALPSRAGGR 351
++ + R +A RR + C CPA RW G A +R+G R
Sbjct: 113 VFTDGRTRAARWRRSASGCRCPAARRWSGRWSAARARSGWR 153
>09_02_0328 -
7293547-7293855,7294161-7294274,7294348-7294429,
7295318-7295401,7296199-7296399,7296516-7296853,
7296968-7297084
Length = 414
Score = 27.1 bits (57), Expect = 8.2
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +3
Query: 3 RGSCARCGASRPA 41
RG C RCGA+RPA
Sbjct: 161 RGVCNRCGAARPA 173
>08_01_0994 + 10071081-10072163,10072704-10074530,10074977-10075054
Length = 995
Score = 27.1 bits (57), Expect = 8.2
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +2
Query: 89 YPDPLIKVNDSVQLDISTNKIMDFIKFDSGNL 184
YP+ + +ND L++S N +D++ GNL
Sbjct: 659 YPETISTLNDLEYLNLSRNSRIDYLPRSLGNL 690
>06_01_0866 + 6582131-6583294
Length = 387
Score = 27.1 bits (57), Expect = 8.2
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +2
Query: 152 MDFIKFDSGNLCMITGGRNLGRVGTIVSRERHPG 253
+ F+ F + + ++ GG+ LG G E HPG
Sbjct: 298 LHFMNFPATPMALLPGGQQLGLAGAGGGGEGHPG 331
>05_03_0415 -
13661745-13664240,13664376-13664401,13665018-13665035,
13665914-13666181,13666531-13666598,13667102-13667243
Length = 1005
Score = 27.1 bits (57), Expect = 8.2
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -2
Query: 399 RSSAMVRRTPFPRGREMYAFVPLP 328
R+SA R PFPR + AF PLP
Sbjct: 102 RASAPTLRWPFPRLLDAIAFRPLP 125
>05_03_0265 - 11293020-11293329,11293911-11294232,11294332-11294455
Length = 251
Score = 27.1 bits (57), Expect = 8.2
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -3
Query: 395 PPRW*GALPSRAGGRCTP 342
PP W ALPS +GG C P
Sbjct: 105 PPNW--ALPSNSGGWCNP 120
>04_04_1483 - 33907259-33907383,33909295-33909848,33909891-33909916
Length = 234
Score = 27.1 bits (57), Expect = 8.2
Identities = 18/52 (34%), Positives = 20/52 (38%), Gaps = 3/52 (5%)
Frame = +1
Query: 10 AVQGAARRDRPQERAVPGDARRA---HAPVPGPAHQGERLGAARHLHQQDHG 156
A G A R RP P A A H P P + +R RH H HG
Sbjct: 57 AADGDAARKRPSAGDAPAPAPLADKRHRPNPPSSGSRDRDRHHRHGHSHSHG 108
>04_04_1302 - 32482764-32483447,32483546-32484109
Length = 415
Score = 27.1 bits (57), Expect = 8.2
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = -1
Query: 262 VEGAGVALARDDGADATQIPAAGDHAEVAGVELDEVHDL 146
+EG G +DA + AA A+V + DE+HDL
Sbjct: 53 LEGTGDVAIACSASDAVKFVAAESDADVRRLAGDELHDL 91
>03_04_0152 + 17740643-17741407
Length = 254
Score = 27.1 bits (57), Expect = 8.2
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -3
Query: 395 PPRW*GALPSRAGGRCTPSCP 333
PP W ALPS GG C P P
Sbjct: 107 PPNW--ALPSDGGGWCNPPRP 125
>03_03_0282 - 16191487-16191975
Length = 162
Score = 27.1 bits (57), Expect = 8.2
Identities = 16/47 (34%), Positives = 20/47 (42%)
Frame = -1
Query: 358 EGDVRLRALADYEHVV*PGRERVPGGVLDVHDVEGAGVALARDDGAD 218
EGD R+R A V +E G V EG G +D+G D
Sbjct: 29 EGDERVRGTATAGEKVGWAQETATGTVAAADVDEGGGTGACKDEGMD 75
>01_06_1291 + 36032088-36032299,36032737-36033314,36034494-36036229
Length = 841
Score = 27.1 bits (57), Expect = 8.2
Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 3/71 (4%)
Frame = -2
Query: 240 SRETMVP---TRPRFLPPVIMQRLPESNLMKSMILLVEMSSCTESFTLMSGSGYRSVRPS 70
SR T P T PR PP + +R+P S + ++S + + + G + +VR S
Sbjct: 130 SRNTFNPNKTTPPRLRPPTLCKRIPSSQGEEISQQSHQISRSHQVWFVPVGFFFSTVRSS 189
Query: 69 CVTRYGTLLGP 37
C GP
Sbjct: 190 CSCEMAKGEGP 200
>01_01_1174 + 9348256-9349734
Length = 492
Score = 27.1 bits (57), Expect = 8.2
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +1
Query: 337 HEGVHLPPAREGSAPHHRGGAGQAHRSEGRRTVALLI 447
H V P + S+P H GG G A ++ R A L+
Sbjct: 139 HVAVIKPLLDDASSPSHGGGGGYASKAVLREVAAFLL 175
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,717,308
Number of Sequences: 37544
Number of extensions: 290365
Number of successful extensions: 1567
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 1479
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1567
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1023611560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -