Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_J20
(493 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M58458-1|AAA63255.1| 263|Homo sapiens ribosomal protein S4X iso... 237 2e-62
M22146-1|AAA36597.1| 244|Homo sapiens protein ( Human scar prot... 237 2e-62
CR456735-1|CAG33016.1| 263|Homo sapiens RPS4X protein. 237 2e-62
BC100904-1|AAI00905.1| 263|Homo sapiens RPS4X protein protein. 237 2e-62
BC100903-1|AAI00904.1| 263|Homo sapiens RPS4X protein protein. 237 2e-62
BC071662-1|AAH71662.1| 263|Homo sapiens ribosomal protein S4, X... 237 2e-62
BC007308-1|AAH07308.2| 243|Homo sapiens RPS4X protein protein. 237 2e-62
BC000472-1|AAH00472.1| 263|Homo sapiens ribosomal protein S4, X... 237 2e-62
AK222479-1|BAD96199.1| 263|Homo sapiens ribosomal protein S4, X... 237 2e-62
AF041428-1|AAB96968.1| 263|Homo sapiens ribosomal protein s4 X ... 237 2e-62
BC100906-1|AAI00907.1| 262|Homo sapiens RPS4Y1 protein protein. 231 1e-60
BC100905-1|AAI00906.1| 263|Homo sapiens ribosomal protein S4, Y... 231 1e-60
M58459-1|AAA63256.1| 263|Homo sapiens ribosomal protein S4Y iso... 229 3e-60
BC010286-1|AAH10286.1| 263|Homo sapiens ribosomal protein S4, Y... 229 3e-60
AF041427-1|AAB96967.1| 263|Homo sapiens ribosomal protein s4 Y ... 229 3e-60
AK222594-1|BAD96314.1| 263|Homo sapiens ribosomal protein S4, Y... 227 2e-59
AF497481-1|AAM18074.1| 263|Homo sapiens ribosomal protein S4 pr... 224 1e-58
BC064028-1|AAH64028.1| 237|Homo sapiens immediate early respons... 33 0.41
AL158151-18|CAI12875.1| 404|Homo sapiens immediate early respon... 33 0.71
AL445584-1|CAH73043.1| 1343|Homo sapiens family with sequence si... 32 0.94
U14518-1|AAA57416.1| 140|Homo sapiens centromere protein-A prot... 32 1.2
BT007246-1|AAP35910.1| 140|Homo sapiens centromere protein A, 1... 32 1.2
BC002703-1|AAH02703.1| 140|Homo sapiens CENPA protein protein. 32 1.2
BC000881-1|AAH00881.1| 114|Homo sapiens centromere protein A pr... 32 1.2
AY307931-1|AAQ73825.1| 336|Homo sapiens intestinal mucin MUC3B ... 32 1.2
AK096970-1|BAC04915.1| 485|Homo sapiens protein ( Homo sapiens ... 32 1.2
AC011740-3|AAX93267.1| 140|Homo sapiens unknown protein. 32 1.2
BC046248-1|AAH46248.1| 503|Homo sapiens similar to CG32656-PA p... 31 1.6
BC052959-1|AAH52959.1| 559|Homo sapiens FIP1L1 protein protein. 31 2.9
AY998490-1|AAX93513.1| 198|Homo sapiens SRY protein protein. 31 2.9
X96421-1|CAA65281.1| 204|Homo sapiens SRY protein. 30 3.8
X53772-1|CAA37790.1| 204|Homo sapiens SRY protein. 30 3.8
L10102-1|AAA60591.1| 204|Homo sapiens sex-determining region Y ... 30 3.8
L10101-1|AAA60590.1| 204|Homo sapiens sex-determining region Y ... 30 3.8
L08063-1|AAA16878.1| 204|Homo sapiens sex determination protein... 30 3.8
DQ086141-1|AAY88212.1| 198|Homo sapiens SRY protein. 30 3.8
DQ086140-1|AAY88211.1| 198|Homo sapiens SRY protein. 30 3.8
BC074924-1|AAH74924.1| 204|Homo sapiens sex determining region ... 30 3.8
BC074923-1|AAH74923.1| 204|Homo sapiens sex determining region ... 30 3.8
AY998491-1|AAY15123.1| 197|Homo sapiens mutant SRY protein prot... 30 3.8
AY998489-1|AAX93512.1| 198|Homo sapiens SRY protein protein. 30 3.8
AY608626-1|AAT37462.1| 198|Homo sapiens SRY protein. 30 3.8
AY608625-1|AAT37461.1| 198|Homo sapiens SRY protein. 30 3.8
AY601860-1|AAT39019.1| 198|Homo sapiens sex-determining region ... 30 3.8
AY601859-1|AAT39018.1| 198|Homo sapiens sex-determining region ... 30 3.8
AY601857-1|AAT39016.1| 198|Homo sapiens sex-determining region ... 30 3.8
AY601856-1|AAT39015.1| 198|Homo sapiens sex-determining region ... 30 3.8
AY601855-1|AAT39014.1| 198|Homo sapiens sex-determining region ... 30 3.8
AY601854-1|AAT39013.1| 198|Homo sapiens sex-determining region ... 30 3.8
AY601853-1|AAT39012.1| 198|Homo sapiens sex-determining region ... 30 3.8
AY601852-1|AAT39011.1| 198|Homo sapiens sex-determining region ... 30 3.8
AY573238-1|AAS79428.1| 198|Homo sapiens SRY protein protein. 30 3.8
AK021601-1|BAB13853.1| 143|Homo sapiens protein ( Homo sapiens ... 30 3.8
AJ421270-1|CAD13147.1| 198|Homo sapiens sex determining region ... 30 3.8
AB075501-1|BAE45751.1| 143|Homo sapiens putative protein produc... 30 3.8
BC110383-1|AAI10384.1| 594|Homo sapiens FIP1 like 1 (S. cerevis... 29 6.6
BC024016-1|AAH24016.1| 559|Homo sapiens FIP1L1 protein protein. 29 6.6
BC011543-1|AAH11543.1| 328|Homo sapiens FIP1L1 protein protein. 29 6.6
AY366510-1|AAQ88277.1| 594|Homo sapiens pre-mRNA 3'end processi... 29 6.6
BC122524-1|AAI22525.1| 134|Homo sapiens putative protein produc... 29 8.8
>M58458-1|AAA63255.1| 263|Homo sapiens ribosomal protein S4X
isoform protein.
Length = 263
Score = 237 bits (580), Expect = 2e-62
Identities = 101/138 (73%), Positives = 124/138 (89%)
Frame = +2
Query: 8 KLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLC 187
KLCKVR++ G K +P+LVTHD RT+RYPDPLIKVND++Q+D+ T KI DFIKFD+GNLC
Sbjct: 122 KLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLC 181
Query: 188 MITGGRNLGRVGTIVSRERHPGSFDIVHVKDSTGHTFATRLNNVFIIGKGTKAYISLPRG 367
M+TGG NLGR+G I +RERHPGSFD+VHVKD+ G++FATRL+N+F+IGKG K +ISLPRG
Sbjct: 182 MVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRG 241
Query: 368 KGVRLTIAEERDKRIAAK 421
KG+RLTIAEERDKR+AAK
Sbjct: 242 KGIRLTIAEERDKRLAAK 259
>M22146-1|AAA36597.1| 244|Homo sapiens protein ( Human scar protein
mRNA, complete cds. ).
Length = 244
Score = 237 bits (580), Expect = 2e-62
Identities = 101/138 (73%), Positives = 124/138 (89%)
Frame = +2
Query: 8 KLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLC 187
KLCKVR++ G K +P+LVTHD RT+RYPDPLIKVND++Q+D+ T KI DFIKFD+GNLC
Sbjct: 103 KLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLC 162
Query: 188 MITGGRNLGRVGTIVSRERHPGSFDIVHVKDSTGHTFATRLNNVFIIGKGTKAYISLPRG 367
M+TGG NLGR+G I +RERHPGSFD+VHVKD+ G++FATRL+N+F+IGKG K +ISLPRG
Sbjct: 163 MVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRG 222
Query: 368 KGVRLTIAEERDKRIAAK 421
KG+RLTIAEERDKR+AAK
Sbjct: 223 KGIRLTIAEERDKRLAAK 240
>CR456735-1|CAG33016.1| 263|Homo sapiens RPS4X protein.
Length = 263
Score = 237 bits (580), Expect = 2e-62
Identities = 101/138 (73%), Positives = 124/138 (89%)
Frame = +2
Query: 8 KLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLC 187
KLCKVR++ G K +P+LVTHD RT+RYPDPLIKVND++Q+D+ T KI DFIKFD+GNLC
Sbjct: 122 KLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLC 181
Query: 188 MITGGRNLGRVGTIVSRERHPGSFDIVHVKDSTGHTFATRLNNVFIIGKGTKAYISLPRG 367
M+TGG NLGR+G I +RERHPGSFD+VHVKD+ G++FATRL+N+F+IGKG K +ISLPRG
Sbjct: 182 MVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRG 241
Query: 368 KGVRLTIAEERDKRIAAK 421
KG+RLTIAEERDKR+AAK
Sbjct: 242 KGIRLTIAEERDKRLAAK 259
>BC100904-1|AAI00905.1| 263|Homo sapiens RPS4X protein protein.
Length = 263
Score = 237 bits (580), Expect = 2e-62
Identities = 101/138 (73%), Positives = 124/138 (89%)
Frame = +2
Query: 8 KLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLC 187
KLCKVR++ G K +P+LVTHD RT+RYPDPLIKVND++Q+D+ T KI DFIKFD+GNLC
Sbjct: 122 KLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLC 181
Query: 188 MITGGRNLGRVGTIVSRERHPGSFDIVHVKDSTGHTFATRLNNVFIIGKGTKAYISLPRG 367
M+TGG NLGR+G I +RERHPGSFD+VHVKD+ G++FATRL+N+F+IGKG K +ISLPRG
Sbjct: 182 MVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRG 241
Query: 368 KGVRLTIAEERDKRIAAK 421
KG+RLTIAEERDKR+AAK
Sbjct: 242 KGIRLTIAEERDKRLAAK 259
>BC100903-1|AAI00904.1| 263|Homo sapiens RPS4X protein protein.
Length = 263
Score = 237 bits (580), Expect = 2e-62
Identities = 101/138 (73%), Positives = 124/138 (89%)
Frame = +2
Query: 8 KLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLC 187
KLCKVR++ G K +P+LVTHD RT+RYPDPLIKVND++Q+D+ T KI DFIKFD+GNLC
Sbjct: 122 KLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLC 181
Query: 188 MITGGRNLGRVGTIVSRERHPGSFDIVHVKDSTGHTFATRLNNVFIIGKGTKAYISLPRG 367
M+TGG NLGR+G I +RERHPGSFD+VHVKD+ G++FATRL+N+F+IGKG K +ISLPRG
Sbjct: 182 MVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRG 241
Query: 368 KGVRLTIAEERDKRIAAK 421
KG+RLTIAEERDKR+AAK
Sbjct: 242 KGIRLTIAEERDKRLAAK 259
>BC071662-1|AAH71662.1| 263|Homo sapiens ribosomal protein S4,
X-linked protein.
Length = 263
Score = 237 bits (580), Expect = 2e-62
Identities = 101/138 (73%), Positives = 124/138 (89%)
Frame = +2
Query: 8 KLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLC 187
KLCKVR++ G K +P+LVTHD RT+RYPDPLIKVND++Q+D+ T KI DFIKFD+GNLC
Sbjct: 122 KLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLC 181
Query: 188 MITGGRNLGRVGTIVSRERHPGSFDIVHVKDSTGHTFATRLNNVFIIGKGTKAYISLPRG 367
M+TGG NLGR+G I +RERHPGSFD+VHVKD+ G++FATRL+N+F+IGKG K +ISLPRG
Sbjct: 182 MVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRG 241
Query: 368 KGVRLTIAEERDKRIAAK 421
KG+RLTIAEERDKR+AAK
Sbjct: 242 KGIRLTIAEERDKRLAAK 259
>BC007308-1|AAH07308.2| 243|Homo sapiens RPS4X protein protein.
Length = 243
Score = 237 bits (580), Expect = 2e-62
Identities = 101/138 (73%), Positives = 124/138 (89%)
Frame = +2
Query: 8 KLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLC 187
KLCKVR++ G K +P+LVTHD RT+RYPDPLIKVND++Q+D+ T KI DFIKFD+GNLC
Sbjct: 102 KLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLC 161
Query: 188 MITGGRNLGRVGTIVSRERHPGSFDIVHVKDSTGHTFATRLNNVFIIGKGTKAYISLPRG 367
M+TGG NLGR+G I +RERHPGSFD+VHVKD+ G++FATRL+N+F+IGKG K +ISLPRG
Sbjct: 162 MVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRG 221
Query: 368 KGVRLTIAEERDKRIAAK 421
KG+RLTIAEERDKR+AAK
Sbjct: 222 KGIRLTIAEERDKRLAAK 239
>BC000472-1|AAH00472.1| 263|Homo sapiens ribosomal protein S4,
X-linked protein.
Length = 263
Score = 237 bits (580), Expect = 2e-62
Identities = 101/138 (73%), Positives = 124/138 (89%)
Frame = +2
Query: 8 KLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLC 187
KLCKVR++ G K +P+LVTHD RT+RYPDPLIKVND++Q+D+ T KI DFIKFD+GNLC
Sbjct: 122 KLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLC 181
Query: 188 MITGGRNLGRVGTIVSRERHPGSFDIVHVKDSTGHTFATRLNNVFIIGKGTKAYISLPRG 367
M+TGG NLGR+G I +RERHPGSFD+VHVKD+ G++FATRL+N+F+IGKG K +ISLPRG
Sbjct: 182 MVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRG 241
Query: 368 KGVRLTIAEERDKRIAAK 421
KG+RLTIAEERDKR+AAK
Sbjct: 242 KGIRLTIAEERDKRLAAK 259
>AK222479-1|BAD96199.1| 263|Homo sapiens ribosomal protein S4,
X-linked X isoform variant protein.
Length = 263
Score = 237 bits (580), Expect = 2e-62
Identities = 101/138 (73%), Positives = 124/138 (89%)
Frame = +2
Query: 8 KLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLC 187
KLCKVR++ G K +P+LVTHD RT+RYPDPLIKVND++Q+D+ T KI DFIKFD+GNLC
Sbjct: 122 KLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLC 181
Query: 188 MITGGRNLGRVGTIVSRERHPGSFDIVHVKDSTGHTFATRLNNVFIIGKGTKAYISLPRG 367
M+TGG NLGR+G I +RERHPGSFD+VHVKD+ G++FATRL+N+F+IGKG K +ISLPRG
Sbjct: 182 MVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRG 241
Query: 368 KGVRLTIAEERDKRIAAK 421
KG+RLTIAEERDKR+AAK
Sbjct: 242 KGIRLTIAEERDKRLAAK 259
>AF041428-1|AAB96968.1| 263|Homo sapiens ribosomal protein s4 X
isoform protein.
Length = 263
Score = 237 bits (580), Expect = 2e-62
Identities = 101/138 (73%), Positives = 124/138 (89%)
Frame = +2
Query: 8 KLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLC 187
KLCKVR++ G K +P+LVTHD RT+RYPDPLIKVND++Q+D+ T KI DFIKFD+GNLC
Sbjct: 122 KLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLC 181
Query: 188 MITGGRNLGRVGTIVSRERHPGSFDIVHVKDSTGHTFATRLNNVFIIGKGTKAYISLPRG 367
M+TGG NLGR+G I +RERHPGSFD+VHVKD+ G++FATRL+N+F+IGKG K +ISLPRG
Sbjct: 182 MVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRG 241
Query: 368 KGVRLTIAEERDKRIAAK 421
KG+RLTIAEERDKR+AAK
Sbjct: 242 KGIRLTIAEERDKRLAAK 259
>BC100906-1|AAI00907.1| 262|Homo sapiens RPS4Y1 protein protein.
Length = 262
Score = 231 bits (565), Expect = 1e-60
Identities = 98/138 (71%), Positives = 123/138 (89%)
Frame = +2
Query: 8 KLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLC 187
KLCKVR++ G K +P+LVTHD RT+RYPDP+IKVND+VQ+D+ T KI++FIKFD+GNLC
Sbjct: 121 KLCKVRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLC 180
Query: 188 MITGGRNLGRVGTIVSRERHPGSFDIVHVKDSTGHTFATRLNNVFIIGKGTKAYISLPRG 367
M+ GG NLGRVG I +RERHPGSFD+VHVKD+ G++FATRL+N+F+IG G K +ISLPRG
Sbjct: 181 MVIGGANLGRVGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGNGNKPWISLPRG 240
Query: 368 KGVRLTIAEERDKRIAAK 421
KG+RLT+AEERDKR+AAK
Sbjct: 241 KGIRLTVAEERDKRLAAK 258
>BC100905-1|AAI00906.1| 263|Homo sapiens ribosomal protein S4,
Y-linked 1 protein.
Length = 263
Score = 231 bits (565), Expect = 1e-60
Identities = 98/138 (71%), Positives = 123/138 (89%)
Frame = +2
Query: 8 KLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLC 187
KLCKVR++ G K +P+LVTHD RT+RYPDP+IKVND+VQ+D+ T KI++FIKFD+GNLC
Sbjct: 122 KLCKVRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLC 181
Query: 188 MITGGRNLGRVGTIVSRERHPGSFDIVHVKDSTGHTFATRLNNVFIIGKGTKAYISLPRG 367
M+ GG NLGRVG I +RERHPGSFD+VHVKD+ G++FATRL+N+F+IG G K +ISLPRG
Sbjct: 182 MVIGGANLGRVGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGNGNKPWISLPRG 241
Query: 368 KGVRLTIAEERDKRIAAK 421
KG+RLT+AEERDKR+AAK
Sbjct: 242 KGIRLTVAEERDKRLAAK 259
>M58459-1|AAA63256.1| 263|Homo sapiens ribosomal protein S4Y
isoform protein.
Length = 263
Score = 229 bits (561), Expect = 3e-60
Identities = 97/138 (70%), Positives = 122/138 (88%)
Frame = +2
Query: 8 KLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLC 187
KLCKVR++ G K +P+LVTHD RT+RYPDP+IKVND+VQ+D+ T KI++FIKFD+GNLC
Sbjct: 122 KLCKVRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLC 181
Query: 188 MITGGRNLGRVGTIVSRERHPGSFDIVHVKDSTGHTFATRLNNVFIIGKGTKAYISLPRG 367
M+ GG NLGRVG I +RERHPGSFD+VHVKD+ G++FATRL+N+F+IG G K +ISLPRG
Sbjct: 182 MVIGGANLGRVGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGNGNKPWISLPRG 241
Query: 368 KGVRLTIAEERDKRIAAK 421
KG+RLT+AEERDKR+A K
Sbjct: 242 KGIRLTVAEERDKRLATK 259
>BC010286-1|AAH10286.1| 263|Homo sapiens ribosomal protein S4,
Y-linked 1 protein.
Length = 263
Score = 229 bits (561), Expect = 3e-60
Identities = 97/138 (70%), Positives = 122/138 (88%)
Frame = +2
Query: 8 KLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLC 187
KLCKVR++ G K +P+LVTHD RT+RYPDP+IKVND+VQ+D+ T KI++FIKFD+GNLC
Sbjct: 122 KLCKVRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLC 181
Query: 188 MITGGRNLGRVGTIVSRERHPGSFDIVHVKDSTGHTFATRLNNVFIIGKGTKAYISLPRG 367
M+ GG NLGRVG I +RERHPGSFD+VHVKD+ G++FATRL+N+F+IG G K +ISLPRG
Sbjct: 182 MVIGGANLGRVGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGNGNKPWISLPRG 241
Query: 368 KGVRLTIAEERDKRIAAK 421
KG+RLT+AEERDKR+A K
Sbjct: 242 KGIRLTVAEERDKRLATK 259
>AF041427-1|AAB96967.1| 263|Homo sapiens ribosomal protein s4 Y
isoform protein.
Length = 263
Score = 229 bits (561), Expect = 3e-60
Identities = 97/138 (70%), Positives = 122/138 (88%)
Frame = +2
Query: 8 KLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLC 187
KLCKVR++ G K +P+LVTHD RT+RYPDP+IKVND+VQ+D+ T KI++FIKFD+GNLC
Sbjct: 122 KLCKVRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLC 181
Query: 188 MITGGRNLGRVGTIVSRERHPGSFDIVHVKDSTGHTFATRLNNVFIIGKGTKAYISLPRG 367
M+ GG NLGRVG I +RERHPGSFD+VHVKD+ G++FATRL+N+F+IG G K +ISLPRG
Sbjct: 182 MVIGGANLGRVGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGNGNKPWISLPRG 241
Query: 368 KGVRLTIAEERDKRIAAK 421
KG+RLT+AEERDKR+A K
Sbjct: 242 KGIRLTVAEERDKRLATK 259
>AK222594-1|BAD96314.1| 263|Homo sapiens ribosomal protein S4,
Y-linked 1 Y isoform variant protein.
Length = 263
Score = 227 bits (554), Expect = 2e-59
Identities = 96/138 (69%), Positives = 121/138 (87%)
Frame = +2
Query: 8 KLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLC 187
KLCKVR++ G K +P+LVTHD RT+RYPDP+IKVND+VQ+D+ T KI++FIKFD+GNLC
Sbjct: 122 KLCKVRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLC 181
Query: 188 MITGGRNLGRVGTIVSRERHPGSFDIVHVKDSTGHTFATRLNNVFIIGKGTKAYISLPRG 367
M+ GG NLGRVG I +RERHPGSF +VHVKD+ G++FATRL+N+F+IG G K +ISLPRG
Sbjct: 182 MVIGGANLGRVGVITNRERHPGSFGVVHVKDANGNSFATRLSNIFVIGNGNKPWISLPRG 241
Query: 368 KGVRLTIAEERDKRIAAK 421
KG+RLT+AEERDKR+A K
Sbjct: 242 KGIRLTVAEERDKRLATK 259
>AF497481-1|AAM18074.1| 263|Homo sapiens ribosomal protein S4
protein.
Length = 263
Score = 224 bits (548), Expect = 1e-58
Identities = 96/138 (69%), Positives = 119/138 (86%)
Frame = +2
Query: 8 KLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLC 187
KLCKVR++ G K +P+LVTHD RT+RYPDPLIKVND+VQ+D+ T KI FIKFD+GN+C
Sbjct: 122 KLCKVRKITVGTKGIPHLVTHDARTIRYPDPLIKVNDTVQIDLGTGKITSFIKFDTGNVC 181
Query: 188 MITGGRNLGRVGTIVSRERHPGSFDIVHVKDSTGHTFATRLNNVFIIGKGTKAYISLPRG 367
M+ G NLGRVG I +RERHPGS D+VHVKD+ G++FATR++N+F+IG G K +ISLPRG
Sbjct: 182 MVIAGANLGRVGVITNRERHPGSCDVVHVKDANGNSFATRISNIFVIGNGNKPWISLPRG 241
Query: 368 KGVRLTIAEERDKRIAAK 421
KG+RLTIAEERDKR+AAK
Sbjct: 242 KGIRLTIAEERDKRLAAK 259
>BC064028-1|AAH64028.1| 237|Homo sapiens immediate early response
5-like protein.
Length = 237
Score = 33.5 bits (73), Expect = 0.41
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = +1
Query: 115 RLGAARHLHQQDHGLHQVRLRQPLHDHR 198
R AARH Q H LHQ+ L+Q LH H+
Sbjct: 103 RESAARHQLHQLHQLHQLHLQQQLHQHQ 130
>AL158151-18|CAI12875.1| 404|Homo sapiens immediate early response
5-like protein.
Length = 404
Score = 32.7 bits (71), Expect = 0.71
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = +1
Query: 124 AARHLHQQDHGLHQVRLRQPLHDHR 198
AARH Q H LHQ+ L+Q LH H+
Sbjct: 106 AARHQLHQLHQLHQLHLQQQLHQHQ 130
>AL445584-1|CAH73043.1| 1343|Homo sapiens family with sequence
similarity 75, member A6 protein.
Length = 1343
Score = 32.3 bits (70), Expect = 0.94
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Frame = -2
Query: 315 LFNLVANVCPVESLTCTMS----KEPGWRSRETMVPTRPRFLPPVIMQRLPESNLMKSMI 148
LFN ++NVCP++ T TMS + R+ + + P+FLP + Q +++L S
Sbjct: 446 LFNEMSNVCPIQRET-TMSPLLFQAQPLSHRQPFISSTPQFLPTPMAQAEAQAHLQSSFP 504
Query: 147 LL 142
+L
Sbjct: 505 VL 506
>U14518-1|AAA57416.1| 140|Homo sapiens centromere protein-A
protein.
Length = 140
Score = 31.9 bits (69), Expect = 1.2
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +1
Query: 19 GAARRDRPQERAVPGDARRAHAPVPGPAHQGERLGAARHLHQQ 147
G RR R E P + P PGP+ +G LGA+ H H +
Sbjct: 2 GPRRRSRKPE--APRRRSPSPTPTPGPSRRGPSLGASSHQHSR 42
>BT007246-1|AAP35910.1| 140|Homo sapiens centromere protein A,
17kDa protein.
Length = 140
Score = 31.9 bits (69), Expect = 1.2
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +1
Query: 19 GAARRDRPQERAVPGDARRAHAPVPGPAHQGERLGAARHLHQQ 147
G RR R E P + P PGP+ +G LGA+ H H +
Sbjct: 2 GPRRRSRKPE--APRRRSPSPTPTPGPSRRGPSLGASSHQHSR 42
>BC002703-1|AAH02703.1| 140|Homo sapiens CENPA protein protein.
Length = 140
Score = 31.9 bits (69), Expect = 1.2
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +1
Query: 19 GAARRDRPQERAVPGDARRAHAPVPGPAHQGERLGAARHLHQQ 147
G RR R E P + P PGP+ +G LGA+ H H +
Sbjct: 2 GPRRRSRKPE--APRRRSPSPTPTPGPSRRGPSLGASSHQHSR 42
>BC000881-1|AAH00881.1| 114|Homo sapiens centromere protein A
protein.
Length = 114
Score = 31.9 bits (69), Expect = 1.2
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +1
Query: 19 GAARRDRPQERAVPGDARRAHAPVPGPAHQGERLGAARHLHQQ 147
G RR R E P + P PGP+ +G LGA+ H H +
Sbjct: 2 GPRRRSRKPE--APRRRSPSPTPTPGPSRRGPSLGASSHQHSR 42
>AY307931-1|AAQ73825.1| 336|Homo sapiens intestinal mucin MUC3B
precursor protein.
Length = 336
Score = 31.9 bits (69), Expect = 1.2
Identities = 23/102 (22%), Positives = 40/102 (39%)
Frame = -2
Query: 405 LSRSSAMVRRTPFPRGREMYAFVPLPIMNTLFNLVANVCPVESLTCTMSKEPGWRSRETM 226
+S ++ RTP P G P P+ TL V + P+ S T T + + T
Sbjct: 220 ISSTTRTTERTPLPTGSIHTTMSPTPVFTTLKTAVTSTSPITS-TITSTNTVTSMTTTTS 278
Query: 225 VPTRPRFLPPVIMQRLPESNLMKSMILLVEMSSCTESFTLMS 100
PT L + L + + ++ ++ T TL++
Sbjct: 279 RPTATNTLSSLTSSILSSTPAPNTEVITSHTTTTTPPSTLVT 320
>AK096970-1|BAC04915.1| 485|Homo sapiens protein ( Homo sapiens
cDNA FLJ39651 fis, clone SMINT2005161, highly similar to
Mus musculus ES18 mRNA. ).
Length = 485
Score = 31.9 bits (69), Expect = 1.2
Identities = 17/34 (50%), Positives = 17/34 (50%)
Frame = +1
Query: 31 RDRPQERAVPGDARRAHAPVPGPAHQGERLGAAR 132
RDR AV G RRA PVP H G LG R
Sbjct: 142 RDRQWLEAVFGTPRRAGCPVPQRTHAGPSLGEVR 175
>AC011740-3|AAX93267.1| 140|Homo sapiens unknown protein.
Length = 140
Score = 31.9 bits (69), Expect = 1.2
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +1
Query: 19 GAARRDRPQERAVPGDARRAHAPVPGPAHQGERLGAARHLHQQ 147
G RR R E P + P PGP+ +G LGA+ H H +
Sbjct: 2 GPRRRSRKPE--APRRRSPSPTPTPGPSRRGPSLGASSHQHSR 42
>BC046248-1|AAH46248.1| 503|Homo sapiens similar to CG32656-PA
protein.
Length = 503
Score = 31.5 bits (68), Expect = 1.6
Identities = 17/35 (48%), Positives = 20/35 (57%)
Frame = +1
Query: 7 EAVQGAARRDRPQERAVPGDARRAHAPVPGPAHQG 111
E+ G ARR R +VPG ARR PGPA +G
Sbjct: 261 ESAPGPARRGRA---SVPGPARRGCDSAPGPARRG 292
Score = 30.7 bits (66), Expect = 2.9
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +1
Query: 37 RPQERAVPGDARRAHAPVPGPAHQG 111
R + PG ARR A VPGPA +G
Sbjct: 257 RLSPESAPGPARRGRASVPGPARRG 281
>BC052959-1|AAH52959.1| 559|Homo sapiens FIP1L1 protein protein.
Length = 559
Score = 30.7 bits (66), Expect = 2.9
Identities = 25/116 (21%), Positives = 40/116 (34%), Gaps = 1/116 (0%)
Frame = +1
Query: 31 RDRPQERAVPGDARRAHAPVPGPAHQGERLGAARHLHQQDHGLHQV-RLRQPLHDHRRQE 207
RDR +ER + R H+P P + E R ++ + H+ R R+ H RR
Sbjct: 440 RDRERERTRERERERDHSPTPSVFNSDEERYRYREYAERGYERHRASREREERHRERRHR 499
Query: 208 SGSXXXXXXXXXXXXXXXXXXXQGLHRAHVRDQVKQRVHNRQGHEGVHLPPAREGS 375
HR H + K+ +++G E P + S
Sbjct: 500 EKEETRHKSSRSNSRRRHESEEGDSHRRHKHKKSKR---SKEGKEAGSEPAPEQES 552
>AY998490-1|AAX93513.1| 198|Homo sapiens SRY protein protein.
Length = 198
Score = 30.7 bits (66), Expect = 2.9
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +1
Query: 298 RDQVKQRVHNRQGHEGVHLPPAREGSAPHHR 390
RD + H+R H+ HLPP S+P R
Sbjct: 165 RDDCTEATHSRMEHQLGHLPPINAASSPQQR 195
>X96421-1|CAA65281.1| 204|Homo sapiens SRY protein.
Length = 204
Score = 30.3 bits (65), Expect = 3.8
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +1
Query: 298 RDQVKQRVHNRQGHEGVHLPPAREGSAPHHR 390
RD + H+R H+ HLPP S+P R
Sbjct: 165 RDDCTKATHSRMEHQLGHLPPINAASSPQQR 195
>X53772-1|CAA37790.1| 204|Homo sapiens SRY protein.
Length = 204
Score = 30.3 bits (65), Expect = 3.8
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +1
Query: 298 RDQVKQRVHNRQGHEGVHLPPAREGSAPHHR 390
RD + H+R H+ HLPP S+P R
Sbjct: 165 RDDCTKATHSRMEHQLGHLPPINAASSPQQR 195
>L10102-1|AAA60591.1| 204|Homo sapiens sex-determining region Y
protein.
Length = 204
Score = 30.3 bits (65), Expect = 3.8
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +1
Query: 298 RDQVKQRVHNRQGHEGVHLPPAREGSAPHHR 390
RD + H+R H+ HLPP S+P R
Sbjct: 165 RDDCTKATHSRMEHQLGHLPPINAASSPQQR 195
>L10101-1|AAA60590.1| 204|Homo sapiens sex-determining region Y
protein.
Length = 204
Score = 30.3 bits (65), Expect = 3.8
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +1
Query: 298 RDQVKQRVHNRQGHEGVHLPPAREGSAPHHR 390
RD + H+R H+ HLPP S+P R
Sbjct: 165 RDDCTKATHSRMEHQLGHLPPINAASSPQQR 195
>L08063-1|AAA16878.1| 204|Homo sapiens sex determination protein
protein.
Length = 204
Score = 30.3 bits (65), Expect = 3.8
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +1
Query: 298 RDQVKQRVHNRQGHEGVHLPPAREGSAPHHR 390
RD + H+R H+ HLPP S+P R
Sbjct: 165 RDDCTKATHSRMEHQLGHLPPINAASSPQQR 195
>DQ086141-1|AAY88212.1| 198|Homo sapiens SRY protein.
Length = 198
Score = 30.3 bits (65), Expect = 3.8
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +1
Query: 298 RDQVKQRVHNRQGHEGVHLPPAREGSAPHHR 390
RD + H+R H+ HLPP S+P R
Sbjct: 165 RDDCTKATHSRMEHQLGHLPPINAASSPQQR 195
>DQ086140-1|AAY88211.1| 198|Homo sapiens SRY protein.
Length = 198
Score = 30.3 bits (65), Expect = 3.8
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +1
Query: 298 RDQVKQRVHNRQGHEGVHLPPAREGSAPHHR 390
RD + H+R H+ HLPP S+P R
Sbjct: 165 RDDCTKATHSRMEHQLGHLPPINAASSPQQR 195
>BC074924-1|AAH74924.1| 204|Homo sapiens sex determining region Y
protein.
Length = 204
Score = 30.3 bits (65), Expect = 3.8
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +1
Query: 298 RDQVKQRVHNRQGHEGVHLPPAREGSAPHHR 390
RD + H+R H+ HLPP S+P R
Sbjct: 165 RDDCTKATHSRMEHQLGHLPPINAASSPQQR 195
>BC074923-1|AAH74923.1| 204|Homo sapiens sex determining region Y
protein.
Length = 204
Score = 30.3 bits (65), Expect = 3.8
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +1
Query: 298 RDQVKQRVHNRQGHEGVHLPPAREGSAPHHR 390
RD + H+R H+ HLPP S+P R
Sbjct: 165 RDDCTKATHSRMEHQLGHLPPINAASSPQQR 195
>AY998491-1|AAY15123.1| 197|Homo sapiens mutant SRY protein
protein.
Length = 197
Score = 30.3 bits (65), Expect = 3.8
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +1
Query: 298 RDQVKQRVHNRQGHEGVHLPPAREGSAPHHR 390
RD + H+R H+ HLPP S+P R
Sbjct: 165 RDDCTKATHSRMEHQLGHLPPINAASSPQQR 195
>AY998489-1|AAX93512.1| 198|Homo sapiens SRY protein protein.
Length = 198
Score = 30.3 bits (65), Expect = 3.8
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +1
Query: 298 RDQVKQRVHNRQGHEGVHLPPAREGSAPHHR 390
RD + H+R H+ HLPP S+P R
Sbjct: 165 RDDCTKATHSRMEHQLGHLPPINAASSPQQR 195
>AY608626-1|AAT37462.1| 198|Homo sapiens SRY protein.
Length = 198
Score = 30.3 bits (65), Expect = 3.8
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +1
Query: 298 RDQVKQRVHNRQGHEGVHLPPAREGSAPHHR 390
RD + H+R H+ HLPP S+P R
Sbjct: 165 RDDCTKATHSRMEHQLGHLPPINAASSPQQR 195
>AY608625-1|AAT37461.1| 198|Homo sapiens SRY protein.
Length = 198
Score = 30.3 bits (65), Expect = 3.8
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +1
Query: 298 RDQVKQRVHNRQGHEGVHLPPAREGSAPHHR 390
RD + H+R H+ HLPP S+P R
Sbjct: 165 RDDCTKATHSRMEHQLGHLPPINAASSPQQR 195
>AY601860-1|AAT39019.1| 198|Homo sapiens sex-determining region on
Y protein.
Length = 198
Score = 30.3 bits (65), Expect = 3.8
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +1
Query: 298 RDQVKQRVHNRQGHEGVHLPPAREGSAPHHR 390
RD + H+R H+ HLPP S+P R
Sbjct: 165 RDDCTKATHSRMEHQLGHLPPINAASSPQQR 195
>AY601859-1|AAT39018.1| 198|Homo sapiens sex-determining region on
Y protein.
Length = 198
Score = 30.3 bits (65), Expect = 3.8
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +1
Query: 298 RDQVKQRVHNRQGHEGVHLPPAREGSAPHHR 390
RD + H+R H+ HLPP S+P R
Sbjct: 165 RDDCTKATHSRMEHQLGHLPPINAASSPQQR 195
>AY601857-1|AAT39016.1| 198|Homo sapiens sex-determining region on
Y protein.
Length = 198
Score = 30.3 bits (65), Expect = 3.8
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +1
Query: 298 RDQVKQRVHNRQGHEGVHLPPAREGSAPHHR 390
RD + H+R H+ HLPP S+P R
Sbjct: 165 RDDCTKATHSRMEHQLGHLPPINAASSPQQR 195
>AY601856-1|AAT39015.1| 198|Homo sapiens sex-determining region on
Y protein.
Length = 198
Score = 30.3 bits (65), Expect = 3.8
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +1
Query: 298 RDQVKQRVHNRQGHEGVHLPPAREGSAPHHR 390
RD + H+R H+ HLPP S+P R
Sbjct: 165 RDDCTKATHSRMEHQLGHLPPINAASSPQQR 195
>AY601855-1|AAT39014.1| 198|Homo sapiens sex-determining region on
Y protein.
Length = 198
Score = 30.3 bits (65), Expect = 3.8
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +1
Query: 298 RDQVKQRVHNRQGHEGVHLPPAREGSAPHHR 390
RD + H+R H+ HLPP S+P R
Sbjct: 165 RDDCTKATHSRMEHQLGHLPPINAASSPQQR 195
>AY601854-1|AAT39013.1| 198|Homo sapiens sex-determining region on
Y protein.
Length = 198
Score = 30.3 bits (65), Expect = 3.8
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +1
Query: 298 RDQVKQRVHNRQGHEGVHLPPAREGSAPHHR 390
RD + H+R H+ HLPP S+P R
Sbjct: 165 RDDCTKATHSRMEHQLGHLPPINAASSPQQR 195
>AY601853-1|AAT39012.1| 198|Homo sapiens sex-determining region on
Y protein.
Length = 198
Score = 30.3 bits (65), Expect = 3.8
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +1
Query: 298 RDQVKQRVHNRQGHEGVHLPPAREGSAPHHR 390
RD + H+R H+ HLPP S+P R
Sbjct: 165 RDDCTKATHSRMEHQLGHLPPINAASSPQQR 195
>AY601852-1|AAT39011.1| 198|Homo sapiens sex-determining region on
Y protein.
Length = 198
Score = 30.3 bits (65), Expect = 3.8
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +1
Query: 298 RDQVKQRVHNRQGHEGVHLPPAREGSAPHHR 390
RD + H+R H+ HLPP S+P R
Sbjct: 165 RDDCTKATHSRMEHQLGHLPPINAASSPQQR 195
>AY573238-1|AAS79428.1| 198|Homo sapiens SRY protein protein.
Length = 198
Score = 30.3 bits (65), Expect = 3.8
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +1
Query: 298 RDQVKQRVHNRQGHEGVHLPPAREGSAPHHR 390
RD + H+R H+ HLPP S+P R
Sbjct: 165 RDDCTKATHSRMEHQLGHLPPINAASSPQQR 195
>AK021601-1|BAB13853.1| 143|Homo sapiens protein ( Homo sapiens
cDNA FLJ11539 fis, clone HEMBA1002748. ).
Length = 143
Score = 30.3 bits (65), Expect = 3.8
Identities = 15/37 (40%), Positives = 17/37 (45%)
Frame = -3
Query: 443 SSATVRRPSLRCACPAPPRW*GALPSRAGGRCTPSCP 333
SS +P PA P ALP+R GG P CP
Sbjct: 44 SSCLKTQPDSDACQPASPTRAAALPTRMGGTTPPRCP 80
>AJ421270-1|CAD13147.1| 198|Homo sapiens sex determining region Y
protein.
Length = 198
Score = 30.3 bits (65), Expect = 3.8
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +1
Query: 298 RDQVKQRVHNRQGHEGVHLPPAREGSAPHHR 390
RD + H+R H+ HLPP S+P R
Sbjct: 165 RDDCTKATHSRMEHQLGHLPPINAASSPQQR 195
>AB075501-1|BAE45751.1| 143|Homo sapiens putative protein product
of Nbla00301 protein.
Length = 143
Score = 30.3 bits (65), Expect = 3.8
Identities = 15/37 (40%), Positives = 17/37 (45%)
Frame = -3
Query: 443 SSATVRRPSLRCACPAPPRW*GALPSRAGGRCTPSCP 333
SS +P PA P ALP+R GG P CP
Sbjct: 44 SSCLKTQPDSDACQPASPTRAAALPTRMGGTTPPRCP 80
>BC110383-1|AAI10384.1| 594|Homo sapiens FIP1 like 1 (S.
cerevisiae) protein.
Length = 594
Score = 29.5 bits (63), Expect = 6.6
Identities = 24/116 (20%), Positives = 40/116 (34%), Gaps = 1/116 (0%)
Frame = +1
Query: 31 RDRPQERAVPGDARRAHAPVPGPAHQGERLGAARHLHQQDHGLHQV-RLRQPLHDHRRQE 207
RDR +ER + R H+P P + E R ++ + H+ R ++ H RR
Sbjct: 475 RDRERERTRERERERDHSPTPSVFNSDEERYRYREYAERGYERHRASREKEERHRERRHR 534
Query: 208 SGSXXXXXXXXXXXXXXXXXXXQGLHRAHVRDQVKQRVHNRQGHEGVHLPPAREGS 375
HR H + K+ +++G E P + S
Sbjct: 535 EKEETRHKSSRSNSRRRHESEEGDSHRRHKHKKSKR---SKEGKEAGSEPAPEQES 587
>BC024016-1|AAH24016.1| 559|Homo sapiens FIP1L1 protein protein.
Length = 559
Score = 29.5 bits (63), Expect = 6.6
Identities = 24/116 (20%), Positives = 40/116 (34%), Gaps = 1/116 (0%)
Frame = +1
Query: 31 RDRPQERAVPGDARRAHAPVPGPAHQGERLGAARHLHQQDHGLHQV-RLRQPLHDHRRQE 207
RDR +ER + R H+P P + E R ++ + H+ R ++ H RR
Sbjct: 440 RDRERERTRERERERDHSPTPSVFNSDEERYRYREYAERGYERHRASREKEERHRERRHR 499
Query: 208 SGSXXXXXXXXXXXXXXXXXXXQGLHRAHVRDQVKQRVHNRQGHEGVHLPPAREGS 375
HR H + K+ +++G E P + S
Sbjct: 500 EKEETRHKSSRSNSRRRHESEEGDSHRRHKHKKSKR---SKEGKEAGSEPAPEQES 552
>BC011543-1|AAH11543.1| 328|Homo sapiens FIP1L1 protein protein.
Length = 328
Score = 29.5 bits (63), Expect = 6.6
Identities = 24/116 (20%), Positives = 40/116 (34%), Gaps = 1/116 (0%)
Frame = +1
Query: 31 RDRPQERAVPGDARRAHAPVPGPAHQGERLGAARHLHQQDHGLHQV-RLRQPLHDHRRQE 207
RDR +ER + R H+P P + E R ++ + H+ R ++ H RR
Sbjct: 209 RDRERERTRERERERDHSPTPSVFNSDEERYRYREYAERGYERHRASREKEERHRERRHR 268
Query: 208 SGSXXXXXXXXXXXXXXXXXXXQGLHRAHVRDQVKQRVHNRQGHEGVHLPPAREGS 375
HR H + K+ +++G E P + S
Sbjct: 269 EKEETRHKSSRSNSRRRHESEEGDSHRRHKHKKSKR---SKEGKEAGSEPAPEQES 321
>AY366510-1|AAQ88277.1| 594|Homo sapiens pre-mRNA 3'end processing
factor FIP1 protein.
Length = 594
Score = 29.5 bits (63), Expect = 6.6
Identities = 24/116 (20%), Positives = 40/116 (34%), Gaps = 1/116 (0%)
Frame = +1
Query: 31 RDRPQERAVPGDARRAHAPVPGPAHQGERLGAARHLHQQDHGLHQV-RLRQPLHDHRRQE 207
RDR +ER + R H+P P + E R ++ + H+ R ++ H RR
Sbjct: 475 RDRERERTRERERERDHSPTPSVFNSDEERYRYREYAERGYERHRASREKEERHRERRHR 534
Query: 208 SGSXXXXXXXXXXXXXXXXXXXQGLHRAHVRDQVKQRVHNRQGHEGVHLPPAREGS 375
HR H + K+ +++G E P + S
Sbjct: 535 EKEETRHKSSRSNSRRRHESEEGDSHRRHKHKKSKR---SKEGKEAGSEPAPEQES 587
>BC122524-1|AAI22525.1| 134|Homo sapiens putative protein product
of Nbla00301 protein.
Length = 134
Score = 29.1 bits (62), Expect = 8.8
Identities = 14/26 (53%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Frame = -3
Query: 407 AC-PAPPRW*GALPSRAGGRCTPSCP 333
AC PA P ALP+R GG P CP
Sbjct: 46 ACQPASPTRAAALPTRMGGTTPPRCP 71
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 62,927,829
Number of Sequences: 237096
Number of extensions: 1320689
Number of successful extensions: 6026
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 5600
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6018
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4423060356
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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