Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_J15
(578 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z72507-15|CAJ55245.1| 365|Caenorhabditis elegans Hypothetical p... 185 2e-47
Z72507-7|CAD56569.1| 373|Caenorhabditis elegans Hypothetical pr... 185 2e-47
Z72507-6|CAA96631.1| 398|Caenorhabditis elegans Hypothetical pr... 185 2e-47
Z81528-6|CAB04285.1| 633|Caenorhabditis elegans Hypothetical pr... 29 1.8
Z11505-3|CAA77584.2| 468|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z92775-2|CAB07162.2| 382|Caenorhabditis elegans Hypothetical pr... 28 5.5
Z92775-1|CAB07161.2| 379|Caenorhabditis elegans Hypothetical pr... 28 5.5
AF039717-3|AAK82917.1| 530|Caenorhabditis elegans Abnormal daue... 28 5.5
AF020344-1|AAB84392.1| 530|Caenorhabditis elegans fork head-rel... 28 5.5
Z79752-5|CAB02082.3| 1119|Caenorhabditis elegans Hypothetical pr... 27 7.3
AJ345015-1|CAC87812.1| 577|Caenorhabditis elegans FEH-1 protein... 27 7.3
AF153275-1|AAD54940.1| 301|Caenorhabditis elegans transcription... 27 7.3
AF016670-7|AAB66102.3| 361|Caenorhabditis elegans Hypothetical ... 27 7.3
AF003145-2|AAB57715.2| 301|Caenorhabditis elegans Runt related ... 27 7.3
AC025723-11|AAN84832.2| 554|Caenorhabditis elegans Mammalian fe... 27 7.3
AC025723-10|AAK29940.1| 691|Caenorhabditis elegans Mammalian fe... 27 7.3
AC025723-9|AAN84831.1| 640|Caenorhabditis elegans Mammalian fe6... 27 7.3
AB027412-1|BAA77765.1| 301|Caenorhabditis elegans RNT-1 protein. 27 7.3
U41274-7|AAA82463.1| 1610|Caenorhabditis elegans Hypothetical pr... 27 9.6
AC084155-1|AAG23361.2| 352|Caenorhabditis elegans Hypothetical ... 27 9.6
>Z72507-15|CAJ55245.1| 365|Caenorhabditis elegans Hypothetical
protein F17C11.9c protein.
Length = 365
Score = 185 bits (451), Expect = 2e-47
Identities = 89/193 (46%), Positives = 119/193 (61%), Gaps = 1/193 (0%)
Frame = +1
Query: 1 ARGRSKLVNVQRWFLTVGHQPQVSSVVGEPVLCLAPPVFDPKKYQDLTHXXXXXXXXXXX 180
A R +VNV RWF TV +QP V V+GE L + F+ K+ +L+
Sbjct: 123 ANARKSIVNVTRWFRTVVNQPAVKEVLGEVSLASSVAQFNQAKFTELS---AKVAKSAPK 179
Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXKESKDPFDSMPKGSFNMDDFKRFYSNEEEA-KSIPY 357
++SKDPF MPKG+F +D+FKR YSNE+ A K+IP+
Sbjct: 180 AEKPKKEAKPAAAAAQPEDDEPKEEKSKDPFQDMPKGTFVLDNFKRSYSNEDTATKAIPH 239
Query: 358 FWEKFDPEHYSIWYCQYKYPEELAKVFMSCNLITGMFQRLDKMRKQAFASVCLFGGDNDS 537
FWE FD +++SIW C+YKYPE+L FMSCNLI GM+QRL+K++K AFAS+ LFG DN+S
Sbjct: 240 FWENFDADNWSIWKCEYKYPEDLTLAFMSCNLINGMYQRLEKLKKNAFASMILFGTDNNS 299
Query: 538 TISGVWVWRVHEL 576
TISG+WVW+ +L
Sbjct: 300 TISGIWVWKGDKL 312
>Z72507-7|CAD56569.1| 373|Caenorhabditis elegans Hypothetical
protein F17C11.9b protein.
Length = 373
Score = 185 bits (451), Expect = 2e-47
Identities = 89/193 (46%), Positives = 119/193 (61%), Gaps = 1/193 (0%)
Frame = +1
Query: 1 ARGRSKLVNVQRWFLTVGHQPQVSSVVGEPVLCLAPPVFDPKKYQDLTHXXXXXXXXXXX 180
A R +VNV RWF TV +QP V V+GE L + F+ K+ +L+
Sbjct: 131 ANARKSIVNVTRWFRTVVNQPAVKEVLGEVSLASSVAQFNQAKFTELS---AKVAKSAPK 187
Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXKESKDPFDSMPKGSFNMDDFKRFYSNEEEA-KSIPY 357
++SKDPF MPKG+F +D+FKR YSNE+ A K+IP+
Sbjct: 188 AEKPKKEAKPAAAAAQPEDDEPKEEKSKDPFQDMPKGTFVLDNFKRSYSNEDTATKAIPH 247
Query: 358 FWEKFDPEHYSIWYCQYKYPEELAKVFMSCNLITGMFQRLDKMRKQAFASVCLFGGDNDS 537
FWE FD +++SIW C+YKYPE+L FMSCNLI GM+QRL+K++K AFAS+ LFG DN+S
Sbjct: 248 FWENFDADNWSIWKCEYKYPEDLTLAFMSCNLINGMYQRLEKLKKNAFASMILFGTDNNS 307
Query: 538 TISGVWVWRVHEL 576
TISG+WVW+ +L
Sbjct: 308 TISGIWVWKGDKL 320
>Z72507-6|CAA96631.1| 398|Caenorhabditis elegans Hypothetical
protein F17C11.9a protein.
Length = 398
Score = 185 bits (451), Expect = 2e-47
Identities = 89/193 (46%), Positives = 119/193 (61%), Gaps = 1/193 (0%)
Frame = +1
Query: 1 ARGRSKLVNVQRWFLTVGHQPQVSSVVGEPVLCLAPPVFDPKKYQDLTHXXXXXXXXXXX 180
A R +VNV RWF TV +QP V V+GE L + F+ K+ +L+
Sbjct: 156 ANARKSIVNVTRWFRTVVNQPAVKEVLGEVSLASSVAQFNQAKFTELS---AKVAKSAPK 212
Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXKESKDPFDSMPKGSFNMDDFKRFYSNEEEA-KSIPY 357
++SKDPF MPKG+F +D+FKR YSNE+ A K+IP+
Sbjct: 213 AEKPKKEAKPAAAAAQPEDDEPKEEKSKDPFQDMPKGTFVLDNFKRSYSNEDTATKAIPH 272
Query: 358 FWEKFDPEHYSIWYCQYKYPEELAKVFMSCNLITGMFQRLDKMRKQAFASVCLFGGDNDS 537
FWE FD +++SIW C+YKYPE+L FMSCNLI GM+QRL+K++K AFAS+ LFG DN+S
Sbjct: 273 FWENFDADNWSIWKCEYKYPEDLTLAFMSCNLINGMYQRLEKLKKNAFASMILFGTDNNS 332
Query: 538 TISGVWVWRVHEL 576
TISG+WVW+ +L
Sbjct: 333 TISGIWVWKGDKL 345
>Z81528-6|CAB04285.1| 633|Caenorhabditis elegans Hypothetical
protein F35E2.7 protein.
Length = 633
Score = 29.5 bits (63), Expect = 1.8
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +1
Query: 325 SNEEEAKSIPYFWEKFDPEHYSIWYCQYKYPEELA 429
SN ++A + W D EH ++ YC+Y+ P LA
Sbjct: 406 SNIDDAIRLNNDWNIHDIEHLNVPYCKYETPGPLA 440
>Z11505-3|CAA77584.2| 468|Caenorhabditis elegans Hypothetical
protein F59B2.5 protein.
Length = 468
Score = 28.7 bits (61), Expect = 3.2
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = +2
Query: 239 LMRNPRSPKTRLTRCQRGLSIWMTSSVSILTKRRRNRFLTSGRSL 373
++R+P SP+TR RGLS S KR + L+ R L
Sbjct: 49 MVRSPGSPRTRDAHKNRGLSAQTAKSSEAEVKRCEDLILSYSRQL 93
>Z92775-2|CAB07162.2| 382|Caenorhabditis elegans Hypothetical
protein C06H5.2 protein.
Length = 382
Score = 27.9 bits (59), Expect = 5.5
Identities = 12/25 (48%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
Frame = +1
Query: 280 MPKGSFNMDDFKRFYSNE-EEAKSI 351
+ GS N+D + RFYS+E +E KS+
Sbjct: 60 LSNGSLNLDSYDRFYSSERKEWKSV 84
>Z92775-1|CAB07161.2| 379|Caenorhabditis elegans Hypothetical
protein C06H5.1 protein.
Length = 379
Score = 27.9 bits (59), Expect = 5.5
Identities = 12/25 (48%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
Frame = +1
Query: 280 MPKGSFNMDDFKRFYSNE-EEAKSI 351
+ GS N+D + RFYS+E +E KS+
Sbjct: 60 LSNGSLNLDSYDRFYSSERKEWKSV 84
>AF039717-3|AAK82917.1| 530|Caenorhabditis elegans Abnormal dauer
formation protein16, isoform a protein.
Length = 530
Score = 27.9 bits (59), Expect = 5.5
Identities = 15/56 (26%), Positives = 28/56 (50%)
Frame = +1
Query: 274 DSMPKGSFNMDDFKRFYSNEEEAKSIPYFWEKFDPEHYSIWYCQYKYPEELAKVFM 441
+S P G +++ +++S+ +IPYF E+ PE + W ++ L FM
Sbjct: 178 ESAPDGRLKLNEIYQWFSD-----NIPYFGERSSPEEAAGWKNSIRHNLSLHSRFM 228
>AF020344-1|AAB84392.1| 530|Caenorhabditis elegans fork
head-related transcriptionfactor DAF-16b protein.
Length = 530
Score = 27.9 bits (59), Expect = 5.5
Identities = 15/56 (26%), Positives = 28/56 (50%)
Frame = +1
Query: 274 DSMPKGSFNMDDFKRFYSNEEEAKSIPYFWEKFDPEHYSIWYCQYKYPEELAKVFM 441
+S P G +++ +++S+ +IPYF E+ PE + W ++ L FM
Sbjct: 178 ESAPDGRLKLNEIYQWFSD-----NIPYFGERSSPEEAAGWKNSIRHNLSLHSRFM 228
>Z79752-5|CAB02082.3| 1119|Caenorhabditis elegans Hypothetical
protein D2005.5 protein.
Length = 1119
Score = 27.5 bits (58), Expect = 7.3
Identities = 10/35 (28%), Positives = 20/35 (57%)
Frame = +1
Query: 271 FDSMPKGSFNMDDFKRFYSNEEEAKSIPYFWEKFD 375
++ +P G + FK + +EEE + P+ ++K D
Sbjct: 154 WEDLPDGWLTAETFKNKFYDEEEVTNNPFGYQKLD 188
>AJ345015-1|CAC87812.1| 577|Caenorhabditis elegans FEH-1 protein
protein.
Length = 577
Score = 27.5 bits (58), Expect = 7.3
Identities = 12/24 (50%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
Frame = +1
Query: 331 EEEAKSIPYFWEKF-DPEHYSIWY 399
EEE K +P WEK DP+ YS ++
Sbjct: 141 EEEPKDLPPGWEKHEDPQGYSYYW 164
>AF153275-1|AAD54940.1| 301|Caenorhabditis elegans transcription
factor RUN protein.
Length = 301
Score = 27.5 bits (58), Expect = 7.3
Identities = 12/43 (27%), Positives = 24/43 (55%)
Frame = +2
Query: 242 MRNPRSPKTRLTRCQRGLSIWMTSSVSILTKRRRNRFLTSGRS 370
++ P SP++ + +++ + S+ +KRRRN +TS S
Sbjct: 250 LKRPSSPRSITKSSETSINLIQETPESVESKRRRNVSITSSNS 292
>AF016670-7|AAB66102.3| 361|Caenorhabditis elegans Hypothetical
protein K02F6.2 protein.
Length = 361
Score = 27.5 bits (58), Expect = 7.3
Identities = 12/40 (30%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +1
Query: 328 NEEEAKSIPYFWEKFDPEHYSIW-YCQYKYPEELAKVFMS 444
N+ + K P + KF PE+Y +W Y +E ++ ++S
Sbjct: 49 NKFKGKKFPRKFPKFGPENYKVWCYVNELDKDETSEYYIS 88
>AF003145-2|AAB57715.2| 301|Caenorhabditis elegans Runt related
protein 1 protein.
Length = 301
Score = 27.5 bits (58), Expect = 7.3
Identities = 12/43 (27%), Positives = 24/43 (55%)
Frame = +2
Query: 242 MRNPRSPKTRLTRCQRGLSIWMTSSVSILTKRRRNRFLTSGRS 370
++ P SP++ + +++ + S+ +KRRRN +TS S
Sbjct: 250 LKRPSSPRSITKSSETSINLIQETPESVESKRRRNVSITSSNS 292
>AC025723-11|AAN84832.2| 554|Caenorhabditis elegans Mammalian fe65
homolog protein1, isoform c protein.
Length = 554
Score = 27.5 bits (58), Expect = 7.3
Identities = 12/24 (50%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
Frame = +1
Query: 331 EEEAKSIPYFWEKF-DPEHYSIWY 399
EEE K +P WEK DP+ YS ++
Sbjct: 118 EEEPKDLPPGWEKHEDPQGYSYYW 141
>AC025723-10|AAK29940.1| 691|Caenorhabditis elegans Mammalian fe65
homolog protein1, isoform a protein.
Length = 691
Score = 27.5 bits (58), Expect = 7.3
Identities = 12/24 (50%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
Frame = +1
Query: 331 EEEAKSIPYFWEKF-DPEHYSIWY 399
EEE K +P WEK DP+ YS ++
Sbjct: 259 EEEPKDLPPGWEKHEDPQGYSYYW 282
>AC025723-9|AAN84831.1| 640|Caenorhabditis elegans Mammalian fe65
homolog protein1, isoform b protein.
Length = 640
Score = 27.5 bits (58), Expect = 7.3
Identities = 12/24 (50%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
Frame = +1
Query: 331 EEEAKSIPYFWEKF-DPEHYSIWY 399
EEE K +P WEK DP+ YS ++
Sbjct: 229 EEEPKDLPPGWEKHEDPQGYSYYW 252
>AB027412-1|BAA77765.1| 301|Caenorhabditis elegans RNT-1 protein.
Length = 301
Score = 27.5 bits (58), Expect = 7.3
Identities = 12/43 (27%), Positives = 24/43 (55%)
Frame = +2
Query: 242 MRNPRSPKTRLTRCQRGLSIWMTSSVSILTKRRRNRFLTSGRS 370
++ P SP++ + +++ + S+ +KRRRN +TS S
Sbjct: 250 LKRPSSPRSITKSSETSINLIQETPESVESKRRRNVSITSSNS 292
>U41274-7|AAA82463.1| 1610|Caenorhabditis elegans Hypothetical
protein T04G9.1 protein.
Length = 1610
Score = 27.1 bits (57), Expect = 9.6
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = -3
Query: 396 PDGVVLGIKLLPEVRNRFRLLFVRIETLEVIHIERPLWHRVKR 268
P+G ++ + RN R+ + +E + +H P++HR KR
Sbjct: 75 PNGAPYPLRPHSDTRNAHRVYPIPVEPPQRVHSIPPVYHRQKR 117
>AC084155-1|AAG23361.2| 352|Caenorhabditis elegans Hypothetical
protein Y45G5AM.6 protein.
Length = 352
Score = 27.1 bits (57), Expect = 9.6
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = +3
Query: 3 TRT*QASECAALVPNGGSSAPGVQC 77
TRT Q EC+ PN GSS G C
Sbjct: 111 TRTIQCRECSEKNPNCGSSCEGHWC 135
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,462,823
Number of Sequences: 27780
Number of extensions: 213274
Number of successful extensions: 695
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 656
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 690
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1205362812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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