Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0014_J14
         (589 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC042195-1|AAH42195.2|  390|Homo sapiens malonyl CoA:ACP acyltra...    87   6e-17
BC030985-1|AAH30985.1|  180|Homo sapiens malonyl CoA:ACP acyltra...    87   6e-17
AL359403-1|CAB94790.1|  180|Homo sapiens hypothetical protein pr...    87   6e-17
AL359401-1|CAB94789.1|  390|Homo sapiens hypothetical protein pr...    87   6e-17
AL022237-3|CAA18261.1|  390|Homo sapiens protein ( Human DNA seq...    87   6e-17
AB107036-1|BAC92750.1| 5061|Homo sapiens epiplakin protein.            31   3.0  
AF111168-4|AAD09622.1|  658|Homo sapiens unknown protein.              30   5.3  

>BC042195-1|AAH42195.2|  390|Homo sapiens malonyl CoA:ACP
           acyltransferase (mitochondrial) protein.
          Length = 390

 Score = 86.6 bits (205), Expect = 6e-17
 Identities = 44/86 (51%), Positives = 55/86 (63%), Gaps = 2/86 (2%)
 Frame = +3

Query: 327 PRDTTVLLFPGQGSQYVGMGRDLLRIPTVRDLYLLASDVVGWDVARVCTEGPTEELAR-- 500
           P   +VLLFPGQGSQ VGMGR LL  P VR+LY  A  V+G+D+  +   GP E L R  
Sbjct: 59  PGQCSVLLFPGQGSQVVGMGRGLLNYPRVRELYAAARRVLGYDLLELSLHGPQETLDRTV 118

Query: 501 RCQTAVLVTSLAALERVREERPGAIE 578
            CQ A+ V SLAA+E++   +P  IE
Sbjct: 119 HCQPAIFVASLAAVEKLHHLQPSVIE 144


>BC030985-1|AAH30985.1|  180|Homo sapiens malonyl CoA:ACP
           acyltransferase (mitochondrial) protein.
          Length = 180

 Score = 86.6 bits (205), Expect = 6e-17
 Identities = 44/86 (51%), Positives = 55/86 (63%), Gaps = 2/86 (2%)
 Frame = +3

Query: 327 PRDTTVLLFPGQGSQYVGMGRDLLRIPTVRDLYLLASDVVGWDVARVCTEGPTEELAR-- 500
           P   +VLLFPGQGSQ VGMGR LL  P VR+LY  A  V+G+D+  +   GP E L R  
Sbjct: 59  PGQCSVLLFPGQGSQVVGMGRGLLNYPRVRELYAAARRVLGYDLLELSLHGPQETLDRTV 118

Query: 501 RCQTAVLVTSLAALERVREERPGAIE 578
            CQ A+ V SLAA+E++   +P  IE
Sbjct: 119 HCQPAIFVASLAAVEKLHHLQPSVIE 144


>AL359403-1|CAB94790.1|  180|Homo sapiens hypothetical protein
           protein.
          Length = 180

 Score = 86.6 bits (205), Expect = 6e-17
 Identities = 44/86 (51%), Positives = 55/86 (63%), Gaps = 2/86 (2%)
 Frame = +3

Query: 327 PRDTTVLLFPGQGSQYVGMGRDLLRIPTVRDLYLLASDVVGWDVARVCTEGPTEELAR-- 500
           P   +VLLFPGQGSQ VGMGR LL  P VR+LY  A  V+G+D+  +   GP E L R  
Sbjct: 59  PGQCSVLLFPGQGSQVVGMGRGLLNYPRVRELYAAARRVLGYDLLELSLHGPQETLDRTV 118

Query: 501 RCQTAVLVTSLAALERVREERPGAIE 578
            CQ A+ V SLAA+E++   +P  IE
Sbjct: 119 HCQPAIFVASLAAVEKLHHLQPSVIE 144


>AL359401-1|CAB94789.1|  390|Homo sapiens hypothetical protein
           protein.
          Length = 390

 Score = 86.6 bits (205), Expect = 6e-17
 Identities = 44/86 (51%), Positives = 55/86 (63%), Gaps = 2/86 (2%)
 Frame = +3

Query: 327 PRDTTVLLFPGQGSQYVGMGRDLLRIPTVRDLYLLASDVVGWDVARVCTEGPTEELAR-- 500
           P   +VLLFPGQGSQ VGMGR LL  P VR+LY  A  V+G+D+  +   GP E L R  
Sbjct: 59  PGQCSVLLFPGQGSQVVGMGRGLLNYPRVRELYAAARRVLGYDLLELSLHGPQETLDRTV 118

Query: 501 RCQTAVLVTSLAALERVREERPGAIE 578
            CQ A+ V SLAA+E++   +P  IE
Sbjct: 119 HCQPAIFVASLAAVEKLHHLQPSVIE 144


>AL022237-3|CAA18261.1|  390|Homo sapiens protein ( Human DNA
           sequence from clone CTB-1191B2 on chromosome
           22q13.2-13.3.Contains the 3' end of a novel gene, the 5'
           end of the gene for  ).
          Length = 390

 Score = 86.6 bits (205), Expect = 6e-17
 Identities = 44/86 (51%), Positives = 55/86 (63%), Gaps = 2/86 (2%)
 Frame = +3

Query: 327 PRDTTVLLFPGQGSQYVGMGRDLLRIPTVRDLYLLASDVVGWDVARVCTEGPTEELAR-- 500
           P   +VLLFPGQGSQ VGMGR LL  P VR+LY  A  V+G+D+  +   GP E L R  
Sbjct: 59  PGQCSVLLFPGQGSQVVGMGRGLLNYPRVRELYAAARRVLGYDLLELSLHGPQETLDRTV 118

Query: 501 RCQTAVLVTSLAALERVREERPGAIE 578
            CQ A+ V SLAA+E++   +P  IE
Sbjct: 119 HCQPAIFVASLAAVEKLHHLQPSVIE 144


>AB107036-1|BAC92750.1| 5061|Homo sapiens epiplakin protein.
          Length = 5061

 Score = 31.1 bits (67), Expect = 3.0
 Identities = 16/55 (29%), Positives = 25/55 (45%)
 Frame = +1

Query: 244  LSTSSCSGRLSRIRGVPTGKPLAATESSRAILQCYCSRGRARSMSVWVVICSGFL 408
            L+ +    R     G P   P  A   S A ++    R R R++ VW V+ SG++
Sbjct: 4067 LAQAQAQARAEAEAGSPRPDPREALRPSAATMEVKVGRLRGRAVPVWDVLASGYV 4121


>AF111168-4|AAD09622.1|  658|Homo sapiens unknown protein.
          Length = 658

 Score = 30.3 bits (65), Expect = 5.3
 Identities = 21/48 (43%), Positives = 22/48 (45%)
 Frame = -3

Query: 314 AASGLPVGTPRIRLSRPLQLLVLRRFWGSGERARVI*XCRSGLRFPPP 171
           AA GLPV  PR+R  RP  L  L    G G         RS L  PPP
Sbjct: 23  AALGLPVKKPRLRGPRPGSLTRLAEVSGGGT------GLRSALSVPPP 64


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,029,136
Number of Sequences: 237096
Number of extensions: 1768800
Number of successful extensions: 3834
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3644
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3829
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6155099854
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)