Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_J14
(589 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 29 0.045
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 29 0.045
AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 25 0.73
AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 24 0.96
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 23 1.7
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 23 2.2
DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex det... 21 6.8
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 21 6.8
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 21 6.8
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 21 6.8
EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein. 21 9.0
AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein. 21 9.0
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 28.7 bits (61), Expect = 0.045
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = +3
Query: 450 WDVARVCTEGPTEELARRCQTAVLVTSLAALERVREERPG 569
W A G EEL R T +L L+ V+E+R G
Sbjct: 743 WKKATGSKSGEYEELRERAYTKILSNGTLLLQHVKEDREG 782
Score = 21.0 bits (42), Expect = 9.0
Identities = 8/21 (38%), Positives = 15/21 (71%)
Frame = -2
Query: 465 RGLHPTRLRQTRGDTSRAQ*E 403
RG++ +R++ GDT++A E
Sbjct: 394 RGMYQCIVRRSEGDTAQASAE 414
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 28.7 bits (61), Expect = 0.045
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = +3
Query: 450 WDVARVCTEGPTEELARRCQTAVLVTSLAALERVREERPG 569
W A G EEL R T +L L+ V+E+R G
Sbjct: 739 WKKATGSKSGEYEELRERAYTKILSNGTLLLQHVKEDREG 778
Score = 21.0 bits (42), Expect = 9.0
Identities = 8/21 (38%), Positives = 15/21 (71%)
Frame = -2
Query: 465 RGLHPTRLRQTRGDTSRAQ*E 403
RG++ +R++ GDT++A E
Sbjct: 394 RGMYQCIVRRSEGDTAQASAE 414
>AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 24.6 bits (51), Expect = 0.73
Identities = 13/46 (28%), Positives = 25/46 (54%)
Frame = +1
Query: 211 TRARSPEPQKRLSTSSCSGRLSRIRGVPTGKPLAATESSRAILQCY 348
+++RSP+ + R +TS+ S + P G + ATE + L+ +
Sbjct: 80 SKSRSPDSRDRSNTSNTSKTIILSNKGPEGIQINATELQKIKLEIH 125
>AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 24.2 bits (50), Expect = 0.96
Identities = 13/46 (28%), Positives = 25/46 (54%)
Frame = +1
Query: 211 TRARSPEPQKRLSTSSCSGRLSRIRGVPTGKPLAATESSRAILQCY 348
+++RSP+ + R +TS+ S + P G + ATE + L+ +
Sbjct: 80 SKSRSPDSRDRSNTSNTSKTVILSNKGPEGIQINATELQKIKLEIH 125
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 23.4 bits (48), Expect = 1.7
Identities = 13/46 (28%), Positives = 25/46 (54%)
Frame = +1
Query: 211 TRARSPEPQKRLSTSSCSGRLSRIRGVPTGKPLAATESSRAILQCY 348
+++RSP+ + R +TS+ S + P G + ATE + L+ +
Sbjct: 80 SKSRSPDSRDRSNTSNTSKTVILSDKGPEGIQINATELQKIKLEIH 125
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 23.0 bits (47), Expect = 2.2
Identities = 16/60 (26%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +1
Query: 211 TRARSPEPQKRLSTSSCSGRLSRIRGVPTGKPLAATESSRAILQCYCS-RGRARSMSVWV 387
+++RSP+ + + +TS+ S + P G + ATE + L+ + G++ + SV V
Sbjct: 80 SKSRSPDSRDKSNTSNTSKTIILSDKGPEGIQINATELQKIKLEIHRDLPGKSTTTSVEV 139
>DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex
determiner protein.
Length = 178
Score = 21.4 bits (43), Expect = 6.8
Identities = 8/23 (34%), Positives = 11/23 (47%)
Frame = -1
Query: 424 YKSRTVGIRSRSRPIPTYCEPCP 356
YK+ + I P+P YC P
Sbjct: 106 YKNYIINIEQIPVPVPIYCGNFP 128
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.4 bits (43), Expect = 6.8
Identities = 12/46 (26%), Positives = 24/46 (52%)
Frame = +1
Query: 211 TRARSPEPQKRLSTSSCSGRLSRIRGVPTGKPLAATESSRAILQCY 348
+++RSP+ + R + S+ S + P G + ATE + L+ +
Sbjct: 80 SKSRSPDSRDRSNASNTSKTVILSDKGPEGIQINATELQKIKLEIH 125
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 21.4 bits (43), Expect = 6.8
Identities = 8/23 (34%), Positives = 11/23 (47%)
Frame = -1
Query: 424 YKSRTVGIRSRSRPIPTYCEPCP 356
YK+ + I P+P YC P
Sbjct: 347 YKNYIINIEQIPVPVPIYCGNFP 369
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 21.4 bits (43), Expect = 6.8
Identities = 12/46 (26%), Positives = 24/46 (52%)
Frame = +1
Query: 211 TRARSPEPQKRLSTSSCSGRLSRIRGVPTGKPLAATESSRAILQCY 348
+++RSP+ + R + S+ S + P G + ATE + L+ +
Sbjct: 80 SKSRSPDSRDRSNASNTSKTVILSDKGPEGIQINATELQKIKLEIH 125
>EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein.
Length = 683
Score = 21.0 bits (42), Expect = 9.0
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +3
Query: 417 DLYLLASDVVGW 452
D YLLA++ GW
Sbjct: 196 DYYLLAANYTGW 207
>AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein.
Length = 683
Score = 21.0 bits (42), Expect = 9.0
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +3
Query: 417 DLYLLASDVVGW 452
D YLLA++ GW
Sbjct: 196 DYYLLAANYTGW 207
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,593
Number of Sequences: 438
Number of extensions: 3462
Number of successful extensions: 15
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17115420
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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