Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0014_J11
         (294 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                21   3.1  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    21   3.1  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    20   7.3  
DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization prot...    19   9.6  
AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    19   9.6  
AF393493-1|AAL60418.1|  142|Apis mellifera odorant binding prote...    19   9.6  
AF166497-1|AAD51945.1|  142|Apis mellifera putative odorant-bind...    19   9.6  

>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 21.0 bits (42), Expect = 3.1
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = -2

Query: 137 HHQ*TS*WLHCLSAHRILPPTVKK*LSSYIN 45
           HH  T    H    H   PPT+ +  SSY+N
Sbjct: 354 HHHQTQSLQHL---HYRQPPTLSESYSSYVN 381


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 21.0 bits (42), Expect = 3.1
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -3

Query: 220 IHVKSAFGCDFSIN 179
           +H   +FG DFS+N
Sbjct: 359 LHNHQSFGMDFSLN 372


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
          protein STG-1 protein.
          Length = 397

 Score = 19.8 bits (39), Expect = 7.3
 Identities = 5/7 (71%), Positives = 6/7 (85%)
 Frame = +3

Query: 21 WCCLNMG 41
          WCC N+G
Sbjct: 14 WCCDNLG 20


>DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization protein
           protein.
          Length = 250

 Score = 19.4 bits (38), Expect = 9.6
 Identities = 9/30 (30%), Positives = 15/30 (50%)
 Frame = -2

Query: 224 LHPCQIRIRMRFLYKHHRRLHFRPSIDGLH 135
           +H  Q+    RFL +   +L  +  + GLH
Sbjct: 109 VHKEQLSREQRFLRRRLEQLTNQTGLHGLH 138


>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 19.4 bits (38), Expect = 9.6
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = -1

Query: 102 ICPPNSTTDGEKMIKFLYK 46
           +CP  + TDGE    F  K
Sbjct: 442 LCPHFNVTDGETTKTFCCK 460


>AF393493-1|AAL60418.1|  142|Apis mellifera odorant binding
          protein ASP2 protein.
          Length = 142

 Score = 19.4 bits (38), Expect = 9.6
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = +2

Query: 11 DANLVLSKYGEYLYKNLI 64
          D + V++KY EYL  +++
Sbjct: 21 DQDTVVAKYMEYLMPDIM 38


>AF166497-1|AAD51945.1|  142|Apis mellifera putative
          odorant-binding protein ASP2 protein.
          Length = 142

 Score = 19.4 bits (38), Expect = 9.6
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = +2

Query: 11 DANLVLSKYGEYLYKNLI 64
          D + V++KY EYL  +++
Sbjct: 21 DQDTVVAKYMEYLMPDIM 38


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,977
Number of Sequences: 438
Number of extensions: 1595
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used:  5994288
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)