Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_J10
(477 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70684-7|CAA94601.1| 143|Caenorhabditis elegans Hypothetical pr... 170 4e-43
Z92838-1|CAB07406.1| 157|Caenorhabditis elegans Hypothetical pr... 38 0.005
AC024817-58|AAF59562.4| 536|Caenorhabditis elegans Hypothetical... 29 2.3
Z81128-8|CAB03402.1| 811|Caenorhabditis elegans Hypothetical pr... 27 5.3
U58750-2|AAB00642.1| 615|Caenorhabditis elegans Polo kinase pro... 27 5.3
AF059024-1|AAC14425.1| 615|Caenorhabditis elegans polo-like kin... 27 5.3
Z92782-8|CAB07185.1| 197|Caenorhabditis elegans Hypothetical pr... 27 9.2
AF036693-4|AAK29786.1| 360|Caenorhabditis elegans Hypothetical ... 27 9.2
AF025467-6|AAB71037.2| 95|Caenorhabditis elegans Hypothetical ... 27 9.2
>Z70684-7|CAA94601.1| 143|Caenorhabditis elegans Hypothetical
protein F28D1.7 protein.
Length = 143
Score = 170 bits (414), Expect = 4e-43
Identities = 78/91 (85%), Positives = 85/91 (93%)
Frame = +1
Query: 181 KKFGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAV 360
+K GVEAKQPNSAIRKCVRVQLIKNGKK+TAFVP DGCLN +EENDEVLV+GFGR GHAV
Sbjct: 53 EKIGVEAKQPNSAIRKCVRVQLIKNGKKITAFVPNDGCLNFVEENDEVLVSGFGRSGHAV 112
Query: 361 GDIPGVRFKVVKVANVSLLALYKEKKERPRS 453
GDIPGVRFK+VKVAN SL+AL+K KKERPRS
Sbjct: 113 GDIPGVRFKIVKVANTSLIALFKGKKERPRS 143
Score = 100 bits (239), Expect = 6e-22
Identities = 42/55 (76%), Positives = 49/55 (89%)
Frame = +3
Query: 24 MGKPRGIRTARKHVNHRREQRWADKEFKKAHMGTRWKANPFGGASHAKGIVLEKV 188
MGKP+G+ TARK HR+EQRW DK +KKAH+GTRWK+NPFGGASHAKGIVLEK+
Sbjct: 1 MGKPKGLCTARKLKTHRQEQRWNDKRYKKAHIGTRWKSNPFGGASHAKGIVLEKI 55
>Z92838-1|CAB07406.1| 157|Caenorhabditis elegans Hypothetical
protein T03D8.2 protein.
Length = 157
Score = 37.5 bits (83), Expect = 0.005
Identities = 21/49 (42%), Positives = 33/49 (67%)
Frame = +1
Query: 202 KQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRK 348
K+PNS RKC V+L G +V A++P G ++++E+ +VLV G GR+
Sbjct: 89 KKPNSGNRKCAIVRL-STGAEVCAYIPNVG--HNLQEHSQVLVKG-GRR 133
>AC024817-58|AAF59562.4| 536|Caenorhabditis elegans Hypothetical
protein Y54G2A.29 protein.
Length = 536
Score = 28.7 bits (61), Expect = 2.3
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = -2
Query: 209 GCLASTPNFFEDDALSMRCTTEGVRLPSRTH 117
GC +P EDDA S+ TT G LP+ T+
Sbjct: 472 GCYTHSPTSSEDDAQSLIETTIGGLLPASTY 502
>Z81128-8|CAB03402.1| 811|Caenorhabditis elegans Hypothetical
protein T23D8.9a protein.
Length = 811
Score = 27.5 bits (58), Expect = 5.3
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +1
Query: 268 TAFVPRDGCLNHIEEN 315
T FVP+DG LN I+EN
Sbjct: 653 TPFVPKDGVLNVIDEN 668
>U58750-2|AAB00642.1| 615|Caenorhabditis elegans Polo kinase
protein 3 protein.
Length = 615
Score = 27.5 bits (58), Expect = 5.3
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = -1
Query: 411 RHVCYLNHLKSDSRNVTNSVAFTTESCN*HLIVLLNVVEATITRHE 274
R++ +H DS+NV FT E C+ + ++ LN +T HE
Sbjct: 93 RNIVQFHHFFEDSQNVY----FTLELCSKNSLMELNKQRGPLTEHE 134
>AF059024-1|AAC14425.1| 615|Caenorhabditis elegans polo-like kinase
protein.
Length = 615
Score = 27.5 bits (58), Expect = 5.3
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = -1
Query: 411 RHVCYLNHLKSDSRNVTNSVAFTTESCN*HLIVLLNVVEATITRHE 274
R++ +H DS+NV FT E C+ + ++ LN +T HE
Sbjct: 93 RNIVQFHHFFEDSQNVY----FTLELCSKNSLMELNKQRGPLTEHE 134
>Z92782-8|CAB07185.1| 197|Caenorhabditis elegans Hypothetical
protein F14F8.9 protein.
Length = 197
Score = 26.6 bits (56), Expect = 9.2
Identities = 10/36 (27%), Positives = 21/36 (58%)
Frame = +1
Query: 292 CLNHIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKV 399
C N + E+DEV+ G+ H+ +P + K++++
Sbjct: 129 CKNKLIEHDEVVTLIIGKGNHSRHQVPVIYNKLIEI 164
>AF036693-4|AAK29786.1| 360|Caenorhabditis elegans Hypothetical
protein C49A9.6 protein.
Length = 360
Score = 26.6 bits (56), Expect = 9.2
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = +3
Query: 21 VMGKPRGIRTARKHVNHRREQRWADKEFKKAHMGTRWKANPFG 149
V K + + KH H + + D FKK GTRW +G
Sbjct: 235 VDSKTESLFVSNKH--HLEQGHFFDGNFKKNADGTRWTCQNYG 275
>AF025467-6|AAB71037.2| 95|Caenorhabditis elegans Hypothetical
protein R148.2 protein.
Length = 95
Score = 26.6 bits (56), Expect = 9.2
Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 4/53 (7%)
Frame = +1
Query: 304 IEENDEVLVAGFGRKGHAVGDIPGVRF----KVVKVANVSLLALYKEKKERPR 450
+E+N +++ G G V D GVR K+ +ANV L + K P+
Sbjct: 5 LEQNVTAMMSSTGASGITVADSEGVRLHSAGKITDMANVGSLMIADAKNMFPK 57
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,099,335
Number of Sequences: 27780
Number of extensions: 262476
Number of successful extensions: 777
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 738
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 775
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 871571276
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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