Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_J02
(537 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_01_0428 + 3055163-3055573 265 1e-71
06_01_0427 - 3054204-3054614 265 1e-71
06_01_0423 - 3039527-3039937 265 1e-71
05_04_0449 - 21355439-21355849 265 1e-71
04_03_0909 + 20748653-20749063 265 1e-71
01_06_1456 + 37507156-37507566 265 1e-71
06_01_0217 - 1644696-1645034,1645143-1645214 264 3e-71
11_01_0348 - 2607315-2607424,2608634-2609030 260 7e-70
03_03_0212 + 15479850-15479921,15479965-15480083,15480175-154802... 249 9e-67
06_01_0425 - 3045557-3046004,3046852-3046856 226 8e-60
12_02_0048 - 12852335-12852745 219 9e-58
02_03_0107 - 15303890-15304060,15304158-15304248,15304505-153046... 212 1e-55
12_02_0047 - 12836779-12837189 208 3e-54
02_03_0108 - 15324922-15325092,15325189-15325279,15325511-15325596 198 2e-51
04_04_0062 + 22437653-22437724,22437866-22437943,22438222-22438392 142 2e-34
05_05_0297 - 23921648-23921758,23922011-23922089,23922774-239228... 135 2e-32
04_02_0033 - 8997041-8997754 31 0.58
02_01_0611 - 4567839-4568144,4568280-4569209,4569301-4569566,456... 30 1.0
02_05_1052 + 33770355-33773981,33774217-33774336,33774880-337749... 29 1.8
05_04_0149 - 18441561-18442082,18442723-18442861,18443295-184433... 29 2.3
03_01_0575 + 4247431-4247489,4248475-4248547,4248792-4249229,425... 29 2.3
03_06_0307 + 33027012-33027167,33028505-33028615,33028927-330290... 27 7.2
01_01_1006 - 7972645-7973811 27 7.2
03_05_0267 - 22538631-22539452 27 9.5
>06_01_0428 + 3055163-3055573
Length = 136
Score = 265 bits (650), Expect = 1e-71
Identities = 128/136 (94%), Positives = 135/136 (99%)
Frame = +1
Query: 115 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 294
MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHR+RPGTVALREIR+YQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
Query: 295 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI 474
LLIRKLPFQRLVREIAQDFKTDLRFQS+A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 475 MPRDIQLARRIRGERA 522
MP+DIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136
>06_01_0427 - 3054204-3054614
Length = 136
Score = 265 bits (650), Expect = 1e-71
Identities = 128/136 (94%), Positives = 135/136 (99%)
Frame = +1
Query: 115 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 294
MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHR+RPGTVALREIR+YQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
Query: 295 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI 474
LLIRKLPFQRLVREIAQDFKTDLRFQS+A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 475 MPRDIQLARRIRGERA 522
MP+DIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136
>06_01_0423 - 3039527-3039937
Length = 136
Score = 265 bits (650), Expect = 1e-71
Identities = 128/136 (94%), Positives = 135/136 (99%)
Frame = +1
Query: 115 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 294
MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHR+RPGTVALREIR+YQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
Query: 295 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI 474
LLIRKLPFQRLVREIAQDFKTDLRFQS+A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 475 MPRDIQLARRIRGERA 522
MP+DIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136
>05_04_0449 - 21355439-21355849
Length = 136
Score = 265 bits (650), Expect = 1e-71
Identities = 128/136 (94%), Positives = 135/136 (99%)
Frame = +1
Query: 115 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 294
MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHR+RPGTVALREIR+YQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
Query: 295 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI 474
LLIRKLPFQRLVREIAQDFKTDLRFQS+A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 475 MPRDIQLARRIRGERA 522
MP+DIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136
>04_03_0909 + 20748653-20749063
Length = 136
Score = 265 bits (650), Expect = 1e-71
Identities = 128/136 (94%), Positives = 135/136 (99%)
Frame = +1
Query: 115 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 294
MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHR+RPGTVALREIR+YQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
Query: 295 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI 474
LLIRKLPFQRLVREIAQDFKTDLRFQS+A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 475 MPRDIQLARRIRGERA 522
MP+DIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136
>01_06_1456 + 37507156-37507566
Length = 136
Score = 265 bits (650), Expect = 1e-71
Identities = 128/136 (94%), Positives = 135/136 (99%)
Frame = +1
Query: 115 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 294
MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHR+RPGTVALREIR+YQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
Query: 295 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI 474
LLIRKLPFQRLVREIAQDFKTDLRFQS+A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 475 MPRDIQLARRIRGERA 522
MP+DIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136
>06_01_0217 - 1644696-1645034,1645143-1645214
Length = 136
Score = 264 bits (647), Expect = 3e-71
Identities = 129/136 (94%), Positives = 134/136 (98%)
Frame = +1
Query: 115 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 294
MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHRYRPGTVALREIR+YQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
Query: 295 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI 474
LLIRKLPFQRLVREIAQDFKTDLRFQS A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 475 MPRDIQLARRIRGERA 522
MP+DIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136
>11_01_0348 - 2607315-2607424,2608634-2609030
Length = 168
Score = 260 bits (636), Expect = 7e-70
Identities = 125/133 (93%), Positives = 132/133 (99%)
Frame = +1
Query: 115 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 294
MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHR+RPGTVALREIR+YQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
Query: 295 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI 474
LLIRKLPFQRLVREIAQDFKTDLRFQS+A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 475 MPRDIQLARRIRG 513
MP+DIQLARRIRG
Sbjct: 121 MPKDIQLARRIRG 133
>03_03_0212 +
15479850-15479921,15479965-15480083,15480175-15480265,
15480363-15480533
Length = 150
Score = 249 bits (610), Expect = 9e-67
Identities = 129/150 (86%), Positives = 134/150 (89%), Gaps = 14/150 (9%)
Frame = +1
Query: 115 MARTKQTARKSTGGKAPRKQLATK--------------AARKSAPSTGGVKKPHRYRPGT 252
MARTKQTARKSTGGKAPRKQLATK AARKSAP+TGGVKKPHRYRPGT
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKSDFDRWSYITISVQAARKSAPTTGGVKKPHRYRPGT 60
Query: 253 VALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFE 432
VALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS A+ ALQEA+EAYLVGLFE
Sbjct: 61 VALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFE 120
Query: 433 DTNLCAIHAKRVTIMPRDIQLARRIRGERA 522
DTNLCAIHAKRVTIMP+DIQLARRIRGERA
Sbjct: 121 DTNLCAIHAKRVTIMPKDIQLARRIRGERA 150
>06_01_0425 - 3045557-3046004,3046852-3046856
Length = 150
Score = 226 bits (553), Expect = 8e-60
Identities = 109/119 (91%), Positives = 116/119 (97%)
Frame = +1
Query: 166 RKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQ 345
RKQLATKA KSAP+TGGVKKPHR+RPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQ
Sbjct: 32 RKQLATKATCKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQ 91
Query: 346 DFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPRDIQLARRIRGERA 522
DFKTDLRFQS+A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMP+DIQLARRIRGERA
Sbjct: 92 DFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 150
>12_02_0048 - 12852335-12852745
Length = 136
Score = 219 bits (536), Expect = 9e-58
Identities = 105/136 (77%), Positives = 120/136 (88%)
Frame = +1
Query: 115 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 294
MARTKQTA+KST PRK L K ARKSAP+ G+KKPHR++PGTVALREIR YQKSTE
Sbjct: 1 MARTKQTAKKSTASNVPRKLLVMKVARKSAPTMAGLKKPHRFKPGTVALREIRTYQKSTE 60
Query: 295 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI 474
LLIRKLPFQRLV+EIAQD ++ +RFQS+A+ ALQEA+E YLVGLF+DTNLC IHAKRVTI
Sbjct: 61 LLIRKLPFQRLVQEIAQDVRSYVRFQSSAVVALQEAAETYLVGLFKDTNLCVIHAKRVTI 120
Query: 475 MPRDIQLARRIRGERA 522
MP+DIQLARRIRGE+A
Sbjct: 121 MPKDIQLARRIRGEKA 136
>02_03_0107 -
15303890-15304060,15304158-15304248,15304505-15304614,
15304715-15304784,15306365-15306558
Length = 211
Score = 212 bits (518), Expect = 1e-55
Identities = 111/145 (76%), Positives = 121/145 (83%), Gaps = 10/145 (6%)
Frame = +1
Query: 115 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGV----------KKPHRYRPGTVALR 264
MARTKQTARKSTGGKAPRK L AA APS+ GV KKP R+RPGTVALR
Sbjct: 66 MARTKQTARKSTGGKAPRKPLRAIAAVMPAPSSRGVARKSVPFIGVKKPRRHRPGTVALR 125
Query: 265 EIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNL 444
EIR+YQK+TELLIRKLPFQRLVREIAQ FK D+RFQS A+ ALQEA+EAYLVGLFEDTNL
Sbjct: 126 EIRKYQKNTELLIRKLPFQRLVREIAQHFKHDMRFQSHAVLALQEAAEAYLVGLFEDTNL 185
Query: 445 CAIHAKRVTIMPRDIQLARRIRGER 519
CAIH+KRVTIM +D+QLARRIRGER
Sbjct: 186 CAIHSKRVTIMSKDVQLARRIRGER 210
>12_02_0047 - 12836779-12837189
Length = 136
Score = 208 bits (507), Expect = 3e-54
Identities = 101/136 (74%), Positives = 113/136 (83%)
Frame = +1
Query: 115 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 294
MARTKQTA+KST G PRK L K ARKSAP G+KKPHR+ P VALREIR YQKSTE
Sbjct: 1 MARTKQTAKKSTAGNVPRKLLVMKVARKSAPMMAGLKKPHRFNPWIVALREIRTYQKSTE 60
Query: 295 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI 474
LLIRKLPFQRLV+EI QD ++ +RFQS+A+ LQEA+E YLVGLFEDTNLC IHAKRVTI
Sbjct: 61 LLIRKLPFQRLVQEITQDIRSYVRFQSSAMAVLQEAAETYLVGLFEDTNLCVIHAKRVTI 120
Query: 475 MPRDIQLARRIRGERA 522
MP+DIQLAR I GE+A
Sbjct: 121 MPKDIQLARCIGGEKA 136
>02_03_0108 - 15324922-15325092,15325189-15325279,15325511-15325596
Length = 115
Score = 198 bits (483), Expect = 2e-51
Identities = 96/111 (86%), Positives = 104/111 (93%)
Frame = +1
Query: 187 AARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLR 366
AARKSAP GGVKKPHRYRPGTVALREIR+YQK+TELLIRKLPFQRLVREIAQ FK D+R
Sbjct: 4 AARKSAPCIGGVKKPHRYRPGTVALREIRKYQKNTELLIRKLPFQRLVREIAQLFKHDMR 63
Query: 367 FQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPRDIQLARRIRGER 519
FQS A+ ALQEA+EAYLVGLFEDTNLCAIH+KRVTIM +D+QLARRIRGER
Sbjct: 64 FQSHAVLALQEAAEAYLVGLFEDTNLCAIHSKRVTIMSKDVQLARRIRGER 114
>04_04_0062 + 22437653-22437724,22437866-22437943,22438222-22438392
Length = 106
Score = 142 bits (343), Expect = 2e-34
Identities = 87/136 (63%), Positives = 96/136 (70%)
Frame = +1
Query: 115 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 294
MARTKQTARKSTGGKAPRKQLATKAARKSAP+ T +++ RY
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPT-------------TGGVKKPHRYP---- 43
Query: 295 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI 474
P++R TDLRFQS A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 44 ------PWKRCS-------STDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 90
Query: 475 MPRDIQLARRIRGERA 522
MP+DIQLARRIRGERA
Sbjct: 91 MPKDIQLARRIRGERA 106
>05_05_0297 -
23921648-23921758,23922011-23922089,23922774-23922822,
23923180-23923255,23923693-23923767,23923862-23923992,
23924830-23924935
Length = 208
Score = 135 bits (326), Expect = 2e-32
Identities = 77/144 (53%), Positives = 98/144 (68%), Gaps = 9/144 (6%)
Frame = +1
Query: 115 MARTKQTARKSTGGKAPRKQLATKAARKS-APSTGGV-------KKPHRYRPGTVALREI 270
MARTK A + + + +K ++ R S A GG +KPHR+RPGTVALREI
Sbjct: 1 MARTKHPAVRKSKAEPKKKLQFERSPRPSKAQRAGGTPRQQTKQRKPHRFRPGTVALREI 60
Query: 271 RRYQKSTELLIRKLPFQRLVREIAQDFKTDL-RFQSAAIGALQEASEAYLVGLFEDTNLC 447
R++QK+TELLI PF RLVREI + D+ R+ A+ ALQEA+E +LV +FE +NLC
Sbjct: 61 RKFQKTTELLIPFAPFSRLVREITDFYSKDVSRWTLEALLALQEAAEYHLVDIFEVSNLC 120
Query: 448 AIHAKRVTIMPRDIQLARRIRGER 519
AIHAKRVTIM +D+QLARRI G R
Sbjct: 121 AIHAKRVTIMQKDMQLARRIGGRR 144
>04_02_0033 - 8997041-8997754
Length = 237
Score = 31.1 bits (67), Expect = 0.58
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +2
Query: 434 TPTFAPSTPNA*PLCLETSSSPG 502
TPT PSTPN P C+ +PG
Sbjct: 156 TPTATPSTPNGDPFCIRGVRTPG 178
>02_01_0611 -
4567839-4568144,4568280-4569209,4569301-4569566,
4569662-4569970,4570497-4570647,4570958-4571012,
4571137-4571512,4571560-4571797,4571878-4572096,
4572629-4572910
Length = 1043
Score = 30.3 bits (65), Expect = 1.0
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +1
Query: 118 ARTKQTARKS-TGGKAPRKQLATKAARKSAPSTGGVKKPHRYRP 246
AR AR+ GG+ P + LA+ A SA + GG ++P + P
Sbjct: 14 ARAAAAARRHHAGGRDPLRALASLAGDASASAGGGARRPAWFAP 57
>02_05_1052 + 33770355-33773981,33774217-33774336,33774880-33774996,
33775322-33775411,33775971-33776078,33776304-33776351
Length = 1369
Score = 29.5 bits (63), Expect = 1.8
Identities = 27/111 (24%), Positives = 46/111 (41%), Gaps = 8/111 (7%)
Frame = +1
Query: 133 TARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREI--RRYQKSTELLIR 306
T+ ++ G +PR++LA+ ST K HR + ALR + R S + +
Sbjct: 737 TSSMASRGTSPRRRLASDGVNALLKSTDFTDKDHRPSTSSAALRGMSPRNRVTSKSIDAK 796
Query: 307 KLPFQR------LVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTN 441
L F +Q ++ S I AL EA + ++G + T+
Sbjct: 797 SLDFSDKDSRPFTPSGASQGTLQEVALASDGINALSEAVDTAVIGSLQSTS 847
>05_04_0149 -
18441561-18442082,18442723-18442861,18443295-18443352,
18443630-18443664,18444528-18444886,18445304-18445450,
18445849-18447954,18448300-18448494,18448629-18448709,
18448758-18448874,18449281-18449370,18449466-18449552,
18450293-18450315,18450675-18450804
Length = 1362
Score = 29.1 bits (62), Expect = 2.3
Identities = 21/93 (22%), Positives = 37/93 (39%)
Frame = -1
Query: 381 GSRLETKIGFKVLSNFSNESLERQLADQQLRRFLIATNFSKRYSTRAITMGFLNSTSTGC 202
G ++G + S+ +L L D+Q+R + NF+ G S +GC
Sbjct: 678 GKGANGRLGHGDTDDRSSPTLVEALKDKQVRTVVCGINFTAAICIHKWVSGVDQSMCSGC 737
Query: 201 RFSRRFSSQLFARSFTSCRFTGCLLCTCHYSLQ 103
R F+ + + +C C C+ SL+
Sbjct: 738 RLP--FNLRRKRHNCYNCALVFCHACSSKKSLK 768
>03_01_0575 +
4247431-4247489,4248475-4248547,4248792-4249229,
4252122-4253339
Length = 595
Score = 29.1 bits (62), Expect = 2.3
Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Frame = +1
Query: 241 RPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLV 420
RP V L + Y+ + EL + K F L R+ + + L FQS + E+Y+
Sbjct: 171 RPRPVYLIDFACYKPADELKVSKAEFIDLARKSGKFDEDSLAFQSRLLAKSGIGDESYMP 230
Query: 421 G-LFEDTNLCA 450
+FE CA
Sbjct: 231 RCVFEPGTNCA 241
>03_06_0307 +
33027012-33027167,33028505-33028615,33028927-33029065,
33029215-33029323,33029422-33029425
Length = 172
Score = 27.5 bits (58), Expect = 7.2
Identities = 18/71 (25%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Frame = +1
Query: 199 SAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRK-LPFQRLVREIAQDFKTDLRFQS 375
SA S G + R R ++ +STE L+RK +R++R + + +++ S
Sbjct: 16 SASSAGAAAERKRKRAAAAKTVSLKNQIRSTERLLRKRRKIERMIRRLEKQQRSNADDAS 75
Query: 376 AAIGALQEASE 408
+ L+E E
Sbjct: 76 NKLSKLKEDLE 86
>01_01_1006 - 7972645-7973811
Length = 388
Score = 27.5 bits (58), Expect = 7.2
Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
Frame = -2
Query: 248 PGR*RWGFLTPPVLGADFRAALVANCLRGAL--PPVDLRAVCFVRA 117
PG + FL V G D RA V C A+ PP+ + FVRA
Sbjct: 333 PGEVAYFFLHSRVFGVDLRACSVLECEFFAMLNPPMRYHSSRFVRA 378
>03_05_0267 - 22538631-22539452
Length = 273
Score = 27.1 bits (57), Expect = 9.5
Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +2
Query: 401 PVKPIWWVCLKTPTFAPSTPNA*PL-CLETSSSPGESAES 517
P +P WW C +P+ P++P+ P SSSP +
Sbjct: 175 PARPRWWPC--SPSSPPASPSPSPARTSPPSSSPSRGCSA 212
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,451,939
Number of Sequences: 37544
Number of extensions: 295534
Number of successful extensions: 922
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 894
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 917
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1186491600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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