Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_I22
(543 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1347.04 |tim54||TIM22 inner membrane protein import complex ... 31 0.11
SPAC3A12.13c |||translation initiation factor eIF3 complex subun... 30 0.19
SPBC27B12.11c |||transcription factor |Schizosaccharomyces pombe... 26 3.1
SPAC3H5.09c |||conserved fungal protein|Schizosaccharomyces pomb... 25 5.5
SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal binuc... 25 5.5
SPAC2G11.07c |ptc3||protein phosphatase 2C Ptc3|Schizosaccharomy... 25 5.5
SPBC342.01c |alg6|SPBC3F6.06c|glucosyltransferase Alg6|Schizosac... 25 7.2
SPAC4G9.14 |||Mvp17/PMP22 family|Schizosaccharomyces pombe|chr 1... 25 9.5
SPCC794.11c |||ENTH domain protein Ent3|Schizosaccharomyces pomb... 25 9.5
SPBC1198.02 |dea2||adenine deaminase Dea2|Schizosaccharomyces po... 25 9.5
>SPBC1347.04 |tim54||TIM22 inner membrane protein import complex
subunit Tim54|Schizosaccharomyces pombe|chr 2|||Manual
Length = 347
Score = 31.1 bits (67), Expect = 0.11
Identities = 15/56 (26%), Positives = 31/56 (55%)
Frame = +3
Query: 15 LEFAFNFFVGKMSGDTDKAKISDNQDEDKKSGAGDGHTTEDESSQDSKGDAKTTAN 182
+ + F+ + K +T+K + ++ +++++K G D ED S D+K D K + N
Sbjct: 161 VRYGFSDDIMKRKLETEKLEANNKEEKEEKEGKDDKDDKED--SNDTKNDKKISKN 214
>SPAC3A12.13c |||translation initiation factor eIF3 complex
subunit|Schizosaccharomyces pombe|chr 1|||Manual
Length = 274
Score = 30.3 bits (65), Expect = 0.19
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 6/52 (11%)
Frame = +3
Query: 27 FNFFVGKMSGDTDKAK--ISDNQDED----KKSGAGDGHTTEDESSQDSKGD 164
F+F +GK S + K K D +DED K+S D H+ +SS S+ D
Sbjct: 18 FDFPLGKDSQSSSKPKKRFDDEEDEDEEENKESLQNDSHSVSQKSSSSSQND 69
>SPBC27B12.11c |||transcription factor |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 738
Score = 26.2 bits (55), Expect = 3.1
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3
Query: 72 KISDNQDEDKKSGAGDGHTTEDESS 146
K+SD + K + A GH+T+D S
Sbjct: 337 KLSDTSNNTKSTTASSGHSTQDSLS 361
>SPAC3H5.09c |||conserved fungal protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 2685
Score = 25.4 bits (53), Expect = 5.5
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +3
Query: 78 SDNQDEDKKSGAGDGHTTEDESSQDSK 158
SD D D S HTTE+ ++Q K
Sbjct: 981 SDIDDNDSNSSNTSNHTTENANAQQRK 1007
>SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal
binuclear cluster type |Schizosaccharomyces pombe|chr
1|||Manual
Length = 522
Score = 25.4 bits (53), Expect = 5.5
Identities = 10/42 (23%), Positives = 21/42 (50%)
Frame = +3
Query: 54 GDTDKAKISDNQDEDKKSGAGDGHTTEDESSQDSKGDAKTTA 179
G + SD+ + DK++ H+T + +Q G + T++
Sbjct: 421 GQQSDSNYSDHHNNDKRAHVSRRHSTSRKIAQSHTGSSSTSS 462
>SPAC2G11.07c |ptc3||protein phosphatase 2C Ptc3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 414
Score = 25.4 bits (53), Expect = 5.5
Identities = 16/55 (29%), Positives = 26/55 (47%)
Frame = +3
Query: 18 EFAFNFFVGKMSGDTDKAKISDNQDEDKKSGAGDGHTTEDESSQDSKGDAKTTAN 182
E+A N G SGD +K I K DG+ + +++++SK D T +
Sbjct: 316 EYAENHGPGWRSGDNNKKVIVPPNFHQVKLNGSDGY--DKDANENSKEDDSTNGS 368
>SPBC342.01c |alg6|SPBC3F6.06c|glucosyltransferase
Alg6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 506
Score = 25.0 bits (52), Expect = 7.2
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = -2
Query: 275 VRFSIFLLLNVTIRFPF 225
+RFS F+LL+VT+ F F
Sbjct: 243 IRFSRFILLSVTVVFTF 259
>SPAC4G9.14 |||Mvp17/PMP22 family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 221
Score = 24.6 bits (51), Expect = 9.5
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -2
Query: 86 IVTDFRFIGITRHFSYEEIESEFQ 15
IV F F+GIT SYE ++S F+
Sbjct: 142 IVFFFLFMGITECKSYERLKSYFR 165
>SPCC794.11c |||ENTH domain protein Ent3|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 476
Score = 24.6 bits (51), Expect = 9.5
Identities = 12/42 (28%), Positives = 24/42 (57%)
Frame = +3
Query: 51 SGDTDKAKISDNQDEDKKSGAGDGHTTEDESSQDSKGDAKTT 176
S +D SDN D ++ + GDG +++ ++ ++G +TT
Sbjct: 219 SSMSDSRDASDN-DVEEYNEDGDGGSSDAATANSTRGSRRTT 259
>SPBC1198.02 |dea2||adenine deaminase Dea2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 367
Score = 24.6 bits (51), Expect = 9.5
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -1
Query: 138 RLLSCDHRLHRISCLHPD 85
+L C+H +H CL PD
Sbjct: 12 KLPKCEHHVHLEGCLSPD 29
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,068,214
Number of Sequences: 5004
Number of extensions: 17961
Number of successful extensions: 95
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 88
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 95
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 223909422
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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