Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_I22
(543 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_1121 - 31041629-31041793,31041891-31042022,31042255-310424... 31 0.79
07_03_1214 + 24931142-24932314,24934177-24934434 29 1.8
05_07_0357 - 29533496-29533556,29533638-29533770,29533857-295339... 29 1.8
06_01_0738 + 5458182-5458374,5460512-5461766,5461861-5462053,546... 29 3.2
04_04_1400 - 33259716-33260069,33260172-33260219,33260471-332605... 29 3.2
05_06_0234 - 26602660-26602728,26602814-26602988,26603077-266031... 28 4.2
04_04_1293 - 32418156-32418584,32420155-32420270,32421798-32421864 28 4.2
11_06_0542 + 24777453-24777632,24777654-24778478,24778576-247793... 28 5.5
11_01_0678 - 5534879-5534883,5535430-5535529,5535638-5535799,553... 28 5.5
06_01_0878 + 6735266-6735340,6735946-6736041,6738610-6738720,673... 28 5.5
03_06_0121 - 31806498-31807220 28 5.5
09_04_0548 - 18469636-18470037,18471164-18472705,18474052-184744... 27 7.3
09_04_0546 - 18460309-18461859,18462593-18463015,18463415-18463540 27 7.3
08_02_1151 - 24712200-24713750,24714587-24715009,24716076-24716201 27 7.3
06_03_1130 - 27826384-27827039,27827800-27828031,27828120-278284... 27 7.3
03_05_0618 + 26177743-26178420,26179477-26179617 27 7.3
12_02_0340 - 17725866-17725884,17726046-17726326,17726842-177269... 27 9.7
02_01_0625 + 4690607-4690696,4692673-4692734,4692867-4693230 27 9.7
01_01_0850 - 6641980-6642163,6642791-6644091 27 9.7
>04_04_1121 -
31041629-31041793,31041891-31042022,31042255-31042425,
31042521-31042622,31042703-31042807,31043115-31043286,
31043916-31043980,31044179-31044502,31044729-31044846,
31044928-31045011,31045472-31045603,31045714-31046570,
31046735-31046849,31047371-31047481,31047763-31047824
Length = 904
Score = 30.7 bits (66), Expect = 0.79
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3
Query: 66 KAKISDNQDEDKKSGAGDGHTTEDESSQDSKGDA 167
K SD++ + + SG H+T+DE S D DA
Sbjct: 262 KKNWSDSESDSEDSGDQSDHSTDDEDSSDESHDA 295
>07_03_1214 + 24931142-24932314,24934177-24934434
Length = 476
Score = 29.5 bits (63), Expect = 1.8
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +3
Query: 36 FVGKMSGDTDKAKISDNQDEDKKSGAGDGHTTEDESSQDSKGD 164
++ KM D ++ SD+ D+D G GDG E+E D + +
Sbjct: 152 YLDKMDADENERPESDDDDDD---GDGDGDGEEEEDDDDDEDE 191
>05_07_0357 -
29533496-29533556,29533638-29533770,29533857-29533953,
29534073-29534141,29534221-29534378,29534483-29534527,
29534598-29534625
Length = 196
Score = 29.5 bits (63), Expect = 1.8
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +3
Query: 57 DTDKAKISDNQDEDKKSGAGDGHTTEDESSQDSKGDA 167
D D + D++DED D ++ED+SS+D + ++
Sbjct: 56 DDDDSDEDDSEDEDLSPEDDDDDSSEDDSSEDDEDES 92
>06_01_0738 +
5458182-5458374,5460512-5461766,5461861-5462053,
5462151-5462344,5462443-5462601,5462683-5463025
Length = 778
Score = 28.7 bits (61), Expect = 3.2
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +3
Query: 66 KAKISDNQDEDKKSGAGDGHTTEDESSQDSKGDAK 170
KA +S+ D SG+G + T D + +KG+AK
Sbjct: 267 KADLSNRSDTPPASGSGHSNHTSDVTVSPAKGNAK 301
>04_04_1400 -
33259716-33260069,33260172-33260219,33260471-33260596,
33260850-33260900,33260963-33261055,33261217-33261272,
33261465-33261522,33262306-33262365,33262513-33262623,
33263368-33263949,33264026-33264097
Length = 536
Score = 28.7 bits (61), Expect = 3.2
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = +3
Query: 42 GKMSGDTDKAKISDNQDEDKKSGAGDGHTTEDESSQDSKGD 164
G G +AK+ +++EDK G+ G ++++ S S D
Sbjct: 116 GAAVGGVAEAKVGGDREEDKGGGSESGSGSDEDDSDGSGSD 156
>05_06_0234 -
26602660-26602728,26602814-26602988,26603077-26603120,
26603204-26603381,26603468-26603652,26603737-26603801,
26603985-26604066,26604342-26604434,26605096-26605191,
26605312-26605355,26605467-26605530
Length = 364
Score = 28.3 bits (60), Expect = 4.2
Identities = 12/49 (24%), Positives = 25/49 (51%)
Frame = +3
Query: 24 AFNFFVGKMSGDTDKAKISDNQDEDKKSGAGDGHTTEDESSQDSKGDAK 170
A ++F G+ + D D I D++D+D + D ++ +D + + K
Sbjct: 295 AVSWFTGEAAQDEDFEGIMDDEDDDDEDDDDDEDEDDEGDDEDDEDEKK 343
>04_04_1293 - 32418156-32418584,32420155-32420270,32421798-32421864
Length = 203
Score = 28.3 bits (60), Expect = 4.2
Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
Frame = +3
Query: 54 GDTDKAKISDNQDEDKKSGAG--DGHTTEDESSQDSKGD 164
GD D DN+D+D G D E+E QD++ D
Sbjct: 148 GDDDDDDDDDNEDDDDDDDGGEDDDGVDEEEEDQDNEDD 186
>11_06_0542 +
24777453-24777632,24777654-24778478,24778576-24779319,
24779422-24780354,24780456-24780938,24780969-24781082,
24781240-24781636,24781732-24782024,24782392-24782802
Length = 1459
Score = 27.9 bits (59), Expect = 5.5
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +3
Query: 45 KMSGDTDKAKISDNQDEDKKSGAGDGHTTEDESSQDSKGDAKTT 176
++ G+ K ++ Q+E K A G+ TEDE Q G T
Sbjct: 342 EIEGNITKNSAAEEQEEKIKGEAAYGNKTEDEIPQTPDGSISKT 385
>11_01_0678 -
5534879-5534883,5535430-5535529,5535638-5535799,
5536000-5536966,5537444-5537561,5538682-5538871,
5538952-5539107,5539296-5540315
Length = 905
Score = 27.9 bits (59), Expect = 5.5
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = +3
Query: 57 DTDKAKISDNQDEDKKSGAGDGHTTEDESSQDSKGD 164
++D + D DED D H+ + ES DS D
Sbjct: 105 ESDDDRGEDESDEDSDGDESDEHSDDGESDDDSDED 140
Score = 27.5 bits (58), Expect = 7.3
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +3
Query: 81 DNQDEDKKSGAGDGHTTEDESSQDSKGD 164
D + ED D EDES +DS GD
Sbjct: 95 DEKGEDSDEDESDDDRGEDESDEDSDGD 122
>06_01_0878 +
6735266-6735340,6735946-6736041,6738610-6738720,
6738816-6739309,6739422-6739587,6739666-6739789,
6739874-6739986,6740085-6740693,6743095-6743385,
6743845-6743913,6744099-6744188,6744281-6744696,
6744882-6744969
Length = 913
Score = 27.9 bits (59), Expect = 5.5
Identities = 13/29 (44%), Positives = 19/29 (65%), Gaps = 2/29 (6%)
Frame = +3
Query: 90 DEDKKSG--AGDGHTTEDESSQDSKGDAK 170
DE+K SG G+G ++D SS+DS+ K
Sbjct: 435 DEEKSSGEDGGEGLDSDDSSSEDSESSEK 463
>03_06_0121 - 31806498-31807220
Length = 240
Score = 27.9 bits (59), Expect = 5.5
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = +3
Query: 57 DTDKAKISDNQDEDKKSGAGDGHTTEDESSQDSKGD 164
+ ++ SD + + G GD T E+E +D GD
Sbjct: 97 EMERGVTSDQVGDGDRGGEGDVETGEEEEEEDDDGD 132
>09_04_0548 -
18469636-18470037,18471164-18472705,18474052-18474474,
18474874-18474999
Length = 830
Score = 27.5 bits (58), Expect = 7.3
Identities = 11/37 (29%), Positives = 22/37 (59%)
Frame = +3
Query: 60 TDKAKISDNQDEDKKSGAGDGHTTEDESSQDSKGDAK 170
T + +ISD++DE++K A +G + + ++ K K
Sbjct: 214 TTEKEISDDEDEEEKKDAEEGKVEDVDEEKEEKEKKK 250
>09_04_0546 - 18460309-18461859,18462593-18463015,18463415-18463540
Length = 699
Score = 27.5 bits (58), Expect = 7.3
Identities = 11/37 (29%), Positives = 22/37 (59%)
Frame = +3
Query: 60 TDKAKISDNQDEDKKSGAGDGHTTEDESSQDSKGDAK 170
T + +ISD++DE++K A +G + + ++ K K
Sbjct: 214 TTEKEISDDEDEEEKKDAEEGKVEDVDEEKEEKEKKK 250
>08_02_1151 - 24712200-24713750,24714587-24715009,24716076-24716201
Length = 699
Score = 27.5 bits (58), Expect = 7.3
Identities = 11/37 (29%), Positives = 22/37 (59%)
Frame = +3
Query: 60 TDKAKISDNQDEDKKSGAGDGHTTEDESSQDSKGDAK 170
T + +ISD++DE++K A +G + + ++ K K
Sbjct: 214 TTEKEISDDEDEEEKKDAEEGKVEDVDEEKEEKEKKK 250
>06_03_1130 - 27826384-27827039,27827800-27828031,27828120-27828491,
27829243-27829449,27829611-27829704,27829806-27829870,
27829946-27830398,27830467-27830760,27830837-27831295,
27831367-27831588,27831755-27831968,27832039-27832494,
27833280-27833389,27833468-27833644,27833758-27833979,
27834048-27834167,27834274-27834383,27834552-27834607,
27835252-27835440,27835602-27835775,27836066-27836281,
27837066-27837106,27837971-27837986,27838330-27838415,
27838737-27838910,27839093-27839149,27839720-27840064,
27840175-27840216,27840377-27840496,27840575-27840724,
27840830-27841534,27841609-27841954,27842978-27843080,
27844817-27844860,27845905-27846101,27846322-27846344,
27846802-27847122,27847406-27847579,27847843-27848047,
27848817-27848880,27850097-27850278,27850291-27850350,
27850688-27850748,27851249-27851313,27851491-27851569,
27851656-27852021,27852442-27852790,27852887-27852989,
27853103-27853373,27854296-27854405,27854515-27854652
Length = 3364
Score = 27.5 bits (58), Expect = 7.3
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +3
Query: 3 TRRRLEFAFNFFVGKMSGDTDKAKISDNQDEDKKSGAG 116
TR L F+F F V G + +K + +D D KS G
Sbjct: 2597 TRTVLHFSFEFLVEGTGGSSVFSKFKEIEDSDCKSDLG 2634
>03_05_0618 + 26177743-26178420,26179477-26179617
Length = 272
Score = 27.5 bits (58), Expect = 7.3
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = +3
Query: 54 GDTDKAKISDNQDEDKKSGAGDGHTTEDESSQDSKGDAK 170
GD D + D ++ED++ G + EDE+ D + ++K
Sbjct: 206 GDEDDEEEGD-EEEDEEEGEEEAEDEEDEAGADEEDESK 243
>12_02_0340 -
17725866-17725884,17726046-17726326,17726842-17726928,
17727018-17727113,17728484-17728585,17728720-17728762,
17728834-17728952,17729348-17729444,17730153-17730214,
17730370-17730432,17730847-17730949,17731402-17731497,
17731594-17731742,17732356-17732529,17733078-17733156,
17733807-17733913,17733994-17734062,17734879-17735043,
17735206-17735703
Length = 802
Score = 27.1 bits (57), Expect = 9.7
Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
Frame = +3
Query: 42 GKMSGDTDKAKISDNQDEDKK---SGAGDGHTTEDESSQD 152
G GD D +++ D+ +ED K G D E E S+D
Sbjct: 76 GDSEGDEDDSEVEDDSEEDDKEVVEGEIDDEEDEVEESED 115
>02_01_0625 + 4690607-4690696,4692673-4692734,4692867-4693230
Length = 171
Score = 27.1 bits (57), Expect = 9.7
Identities = 10/36 (27%), Positives = 19/36 (52%)
Frame = +3
Query: 51 SGDTDKAKISDNQDEDKKSGAGDGHTTEDESSQDSK 158
S D D + D++DED G+G +D+ ++ +
Sbjct: 118 SDDDDGGEDDDDEDEDGDDDEGEGEGEDDDEDEEEE 153
>01_01_0850 - 6641980-6642163,6642791-6644091
Length = 494
Score = 27.1 bits (57), Expect = 9.7
Identities = 16/29 (55%), Positives = 18/29 (62%), Gaps = 3/29 (10%)
Frame = +3
Query: 75 ISDNQDEDKKSGAGDG-H--TTEDESSQD 152
ISDN+DED+ DG H TE ESS D
Sbjct: 215 ISDNEDEDEDEDGVDGAHVVVTEIESSDD 243
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,198,662
Number of Sequences: 37544
Number of extensions: 126544
Number of successful extensions: 685
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 622
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 677
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1210221432
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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