Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0014_I22
         (543 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p...    26   0.92 
AJ404478-1|CAC16182.1|   77|Anopheles gambiae putative GATA fact...    25   1.2  
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    24   3.7  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           23   4.9  

>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/proton
            exchanger 3 protein.
          Length = 1221

 Score = 25.8 bits (54), Expect = 0.92
 Identities = 8/23 (34%), Positives = 16/23 (69%)
 Frame = +3

Query: 69   AKISDNQDEDKKSGAGDGHTTED 137
            A  +D+ ++D++ G+GD H  +D
Sbjct: 1163 ASSTDSDEDDEEEGSGDRHRADD 1185


>AJ404478-1|CAC16182.1|   77|Anopheles gambiae putative GATA factor
           protein.
          Length = 77

 Score = 25.4 bits (53), Expect = 1.2
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +1

Query: 115 AMVTRQKTSHHRTPRVMQKPQPTVKT 192
           A+ TRQ    +R P   QK + TVKT
Sbjct: 23  ALYTRQNPGTNRPPNRSQKAKQTVKT 48


>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 1222

 Score = 23.8 bits (49), Expect = 3.7
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = -1

Query: 147 VMTRLLSCDHRLHRISCLHPDCH*FSLYRYHPTFFLRRN 31
           +   L +CD  + R++ LH D H  +++ + P     RN
Sbjct: 318 IAAMLKACDETMQRVTRLHQDPH-RNIFWWSPLLARLRN 355


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 23.4 bits (48), Expect = 4.9
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +3

Query: 69   AKISDNQDEDKKSGAGDGHT 128
            A  S   DE +  G+G GHT
Sbjct: 1411 ASTSSQTDEPRPGGSGGGHT 1430


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 273,144
Number of Sequences: 2352
Number of extensions: 4908
Number of successful extensions: 16
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50040333
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)