Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_I22
(543 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR457339-1|CAG33620.1| 163|Homo sapiens NUCKS protein. 31 3.4
BC000805-1|AAH00805.1| 243|Homo sapiens nuclear casein kinase a... 31 3.4
AK025133-1|BAB15076.1| 163|Homo sapiens protein ( Homo sapiens ... 31 3.4
AJ012584-1|CAC20408.1| 243|Homo sapiens nuclear ubiquitous case... 31 3.4
AB049824-1|BAC06820.1| 243|Homo sapiens JC7 protein. 31 3.4
BC046107-1|AAH46107.1| 595|Homo sapiens ESF1 protein protein. 30 6.0
BC030513-1|AAH30513.1| 595|Homo sapiens ESF1 protein protein. 30 6.0
BC020952-1|AAH20952.1| 552|Homo sapiens Unknown (protein for IM... 30 6.0
AL161659-1|CAC07199.1| 851|Homo sapiens chromosome 20 open read... 30 6.0
AK022369-1|BAB14023.1| 589|Homo sapiens protein ( Homo sapiens ... 30 6.0
AK000375-1|BAA91123.1| 551|Homo sapiens protein ( Homo sapiens ... 30 6.0
>CR457339-1|CAG33620.1| 163|Homo sapiens NUCKS protein.
Length = 163
Score = 30.7 bits (66), Expect = 3.4
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +3
Query: 45 KMSGDTDKAKISDNQDEDKKSGAGDGHTTEDESSQDSKGDAK 170
+ SG + D++D+D K+ D H+ ED S+D K D K
Sbjct: 48 RRSGKNSQEDSEDSEDKDVKTKKDDSHSAED--SEDEKEDHK 87
>BC000805-1|AAH00805.1| 243|Homo sapiens nuclear casein kinase and
cyclin-dependent kinase substrate 1 protein.
Length = 243
Score = 30.7 bits (66), Expect = 3.4
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +3
Query: 45 KMSGDTDKAKISDNQDEDKKSGAGDGHTTEDESSQDSKGDAK 170
+ SG + D++D+D K+ D H+ ED S+D K D K
Sbjct: 48 RRSGKNSQEDSEDSEDKDVKTKKDDSHSAED--SEDEKEDHK 87
>AK025133-1|BAB15076.1| 163|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21480 fis, clone COL05034. ).
Length = 163
Score = 30.7 bits (66), Expect = 3.4
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +3
Query: 45 KMSGDTDKAKISDNQDEDKKSGAGDGHTTEDESSQDSKGDAK 170
+ SG + D++D+D K+ D H+ ED S+D K D K
Sbjct: 48 RRSGKNSQEDSEDSEDKDVKTKKDDSHSAED--SEDEKEDHK 87
>AJ012584-1|CAC20408.1| 243|Homo sapiens nuclear ubiquitous casein
kinase and cyclin-dependent kinase substrate protein.
Length = 243
Score = 30.7 bits (66), Expect = 3.4
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +3
Query: 45 KMSGDTDKAKISDNQDEDKKSGAGDGHTTEDESSQDSKGDAK 170
+ SG + D++D+D K+ D H+ ED S+D K D K
Sbjct: 48 RRSGKNSQEDSEDSEDKDVKTKKDDSHSAED--SEDEKEDHK 87
>AB049824-1|BAC06820.1| 243|Homo sapiens JC7 protein.
Length = 243
Score = 30.7 bits (66), Expect = 3.4
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +3
Query: 45 KMSGDTDKAKISDNQDEDKKSGAGDGHTTEDESSQDSKGDAK 170
+ SG + D++D+D K+ D H+ ED S+D K D K
Sbjct: 48 RRSGKNSQEDSEDSEDKDVKTKKDDSHSAED--SEDEKEDHK 87
>BC046107-1|AAH46107.1| 595|Homo sapiens ESF1 protein protein.
Length = 595
Score = 29.9 bits (64), Expect = 6.0
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = +3
Query: 39 VGKMSGDTDKAKISDNQDEDKKSGAGDGHTTEDESSQDSKGD 164
VG+ SGD D ++ + +DED++ + +ED+ DS D
Sbjct: 262 VGRASGDDDGSEDDEEEDEDEEE--DEDEDSEDDDKSDSGPD 301
>BC030513-1|AAH30513.1| 595|Homo sapiens ESF1 protein protein.
Length = 595
Score = 29.9 bits (64), Expect = 6.0
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = +3
Query: 39 VGKMSGDTDKAKISDNQDEDKKSGAGDGHTTEDESSQDSKGD 164
VG+ SGD D ++ + +DED++ + +ED+ DS D
Sbjct: 262 VGRASGDDDGSEDDEEEDEDEEE--DEDEDSEDDDKSDSGPD 301
>BC020952-1|AAH20952.1| 552|Homo sapiens Unknown (protein for
IMAGE:3850711) protein.
Length = 552
Score = 29.9 bits (64), Expect = 6.0
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = +3
Query: 39 VGKMSGDTDKAKISDNQDEDKKSGAGDGHTTEDESSQDSKGD 164
VG+ SGD D ++ + +DED++ + +ED+ DS D
Sbjct: 171 VGRASGDDDGSEDDEEEDEDEEE--DEDEDSEDDDKSDSGPD 210
>AL161659-1|CAC07199.1| 851|Homo sapiens chromosome 20 open reading
frame 6 protein.
Length = 851
Score = 29.9 bits (64), Expect = 6.0
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = +3
Query: 39 VGKMSGDTDKAKISDNQDEDKKSGAGDGHTTEDESSQDSKGD 164
VG+ SGD D ++ + +DED++ + +ED+ DS D
Sbjct: 262 VGRASGDDDGSEDDEEEDEDEEE--DEDEDSEDDDKSDSGPD 301
>AK022369-1|BAB14023.1| 589|Homo sapiens protein ( Homo sapiens
cDNA FLJ12307 fis, clone MAMMA1001908. ).
Length = 589
Score = 29.9 bits (64), Expect = 6.0
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = +3
Query: 39 VGKMSGDTDKAKISDNQDEDKKSGAGDGHTTEDESSQDSKGD 164
VG+ SGD D ++ + +DED++ + +ED+ DS D
Sbjct: 262 VGRASGDDDGSEDDEEEDEDEEE--DEDEDSEDDDKSDSGPD 301
>AK000375-1|BAA91123.1| 551|Homo sapiens protein ( Homo sapiens
cDNA FLJ20368 fis, clone HEP18272. ).
Length = 551
Score = 29.9 bits (64), Expect = 6.0
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = +3
Query: 39 VGKMSGDTDKAKISDNQDEDKKSGAGDGHTTEDESSQDSKGD 164
VG+ SGD D ++ + +DED++ + +ED+ DS D
Sbjct: 123 VGRASGDDDGSEDDEEEDEDEEE--DEDEDSEDDDKSDSGPD 162
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,082,104
Number of Sequences: 237096
Number of extensions: 632679
Number of successful extensions: 3270
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2993
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3241
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5308067764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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