Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0014_I22
         (543 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II ...    25   0.66 
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    23   1.5  
L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.          22   4.6  
DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    21   6.1  

>AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II
           protein.
          Length = 190

 Score = 24.6 bits (51), Expect = 0.66
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = -1

Query: 168 LHHPWSPVMTRLLSCDHRLHRISCL 94
           L HPW     R+ S  HR   + CL
Sbjct: 165 LKHPWICQRERVASVVHRQETVDCL 189


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 10/34 (29%), Positives = 20/34 (58%)
 Frame = -2

Query: 113 CTGFLVFILIVTDFRFIGITRHFSYEEIESEFQA 12
           CT  ++ +  ++  R++ +TR  SY +I S  +A
Sbjct: 149 CTASILNLCAISLDRYLAVTRPVSYPQIMSPRRA 182


>L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.
          Length = 149

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +1

Query: 70  RKSVTIRMKTRNPVQAMVTRQK 135
           RKSV        P  ++VTRQK
Sbjct: 115 RKSVVFHHDNARPHTSLVTRQK 136


>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -2

Query: 212 IVAASFIVFTVGCGF 168
           I+  SFI+FT+  GF
Sbjct: 34  IITNSFIIFTMQTGF 48


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,501
Number of Sequences: 438
Number of extensions: 1075
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15459066
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)