Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_I17
(555 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase pro... 25 0.68
EF493864-1|ABP65286.1| 247|Apis mellifera triosephoshpate isome... 23 1.6
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 23 1.6
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 23 1.6
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 23 2.1
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 23 2.7
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 22 3.6
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 22 3.6
DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related pro... 21 6.3
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 21 8.4
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 21 8.4
>AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase
protein.
Length = 580
Score = 24.6 bits (51), Expect = 0.68
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +3
Query: 165 FVGGAWSMNDEAASHYQSTIDQFTLGLSKLN 257
F G AW N+E +Y + QF G LN
Sbjct: 168 FWGSAWQWNEERKQYY---LHQFATGQPDLN 195
>EF493864-1|ABP65286.1| 247|Apis mellifera triosephoshpate
isomerase protein.
Length = 247
Score = 23.4 bits (48), Expect = 1.6
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +3
Query: 153 GRLQFVGGAWSMN 191
GR FVGG W MN
Sbjct: 2 GRKFFVGGNWKMN 14
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 23.4 bits (48), Expect = 1.6
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +2
Query: 476 WSSV*HILAAAWILFRYTVRRRSD 547
W+++ +I+ AW LF V R D
Sbjct: 110 WTNIYYIIILAWALFYLLVSLRID 133
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 23.4 bits (48), Expect = 1.6
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +2
Query: 476 WSSV*HILAAAWILFRYTVRRRSD 547
W+++ +I+ AW LF V R D
Sbjct: 163 WTNIYYIIILAWALFYLLVSLRID 186
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 23.0 bits (47), Expect = 2.1
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = -2
Query: 485 QNSSEYIGCFSDIIISTPQHLH 420
+N S+Y F +I+ +PQ +H
Sbjct: 349 ENESDYQDAFCNIVSCSPQTVH 370
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 22.6 bits (46), Expect = 2.7
Identities = 12/27 (44%), Positives = 15/27 (55%), Gaps = 2/27 (7%)
Frame = -3
Query: 313 PNGSICQPT--RGLPHSPKVSFNLLSP 239
PNG I P+ G+PH P FN +P
Sbjct: 1141 PNG-IKMPSFMEGMPHLPFTPFNFWNP 1166
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 22.2 bits (45), Expect = 3.6
Identities = 14/48 (29%), Positives = 20/48 (41%), Gaps = 8/48 (16%)
Frame = +3
Query: 12 YILDSVIRELWEDPKRRF--------IYVETAFFWKWWVRQTEAVKDK 131
+ LD R+ W DP+ F + V + F WV T V +K
Sbjct: 57 FTLDFYFRQFWTDPRLAFKKRTGVETLSVGSEFIKNIWVPDTFFVNEK 104
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 22.2 bits (45), Expect = 3.6
Identities = 14/48 (29%), Positives = 20/48 (41%), Gaps = 8/48 (16%)
Frame = +3
Query: 12 YILDSVIRELWEDPKRRF--------IYVETAFFWKWWVRQTEAVKDK 131
+ LD R+ W DP+ F + V + F WV T V +K
Sbjct: 57 FTLDFYFRQFWTDPRLAFKKRTGVETLSVGSEFIKNIWVPDTFFVNEK 104
>DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related
protein STG-1 protein.
Length = 397
Score = 21.4 bits (43), Expect = 6.3
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +3
Query: 279 RPRVGWQIDPFGHSREFASLLAAMGY 356
RPR +Q PF + F+ LL G+
Sbjct: 213 RPRSSFQGPPFTYRYGFSFLLYVSGF 238
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 21.0 bits (42), Expect = 8.4
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = +2
Query: 89 LEVVGQANRGC 121
+EV+G A+RGC
Sbjct: 136 VEVIGGASRGC 146
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 21.0 bits (42), Expect = 8.4
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = +2
Query: 89 LEVVGQANRGC 121
+EV+G A+RGC
Sbjct: 136 VEVIGGASRGC 146
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,374
Number of Sequences: 438
Number of extensions: 3855
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15949830
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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