Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_I12
(515 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC16A3.05c |rae1||RNA export factor Rae1|Schizosaccharomyces p... 84 1e-17
SPBC713.04c |||U3 snoRNP-associated protein Utp1|Schizosaccharom... 42 4e-05
SPBC6B1.10 |prp17||splicing factor Prp17|Schizosaccharomyces pom... 38 9e-04
SPBC354.03 |swd3||WD repeat protein Swd3|Schizosaccharomyces pom... 38 9e-04
SPAC630.14c |tup12||transcriptional corepressor Tup12 |Schizosac... 34 0.015
SPAC57A10.05c |pof1||F-box protein Pof1|Schizosaccharomyces pomb... 32 0.059
SPAC25H1.08c |||ribosome biogenesis protein Sqt1|Schizosaccharom... 31 0.077
SPAC6B12.15 |cpc2|rkp1|RACK1 homologue Cpc2|Schizosaccharomyces ... 31 0.14
SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5... 30 0.18
SPAC23H3.08c |bub3||mitotic spindle checkpoint protein Bub3|Schi... 29 0.31
SPAC3H5.08c |||WD repeat protein Wdr44 family|Schizosaccharomyce... 29 0.55
SPAC26H5.03 |||WD repeat protein Cac2|Schizosaccharomyces pombe|... 29 0.55
SPAC4F10.18 |||WD repeat protein, human NUP37 family|Schizosacch... 28 0.95
SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|c... 28 0.95
SPAC2E1P5.05 |||U3 snoRNP-associated protein Rrp9 |Schizosacchar... 27 1.3
SPCC613.12c |raf1|dos1, cmc1, clr8|Rik1-associated factor Raf1|S... 27 1.3
SPBC1773.12 |||transcription factor |Schizosaccharomyces pombe|c... 27 1.7
SPAC4D7.05 |sum1|tif34|translation initiation factor eIF3i|Schiz... 27 1.7
SPBC18H10.05 |||WD repeat protein Wdr44 family, WD repeat protei... 27 2.2
SPAC343.04c |gnr1||heterotrimeric G protein beta subunit Gnr1|Sc... 27 2.2
SPBP19A11.02c |||sequence orphan|Schizosaccharomyces pombe|chr 2... 26 2.9
SPAC10F6.01c ||SPAC4C5.05c|sulfite reductase beta subunit |Schiz... 26 3.8
SPBC887.04c |lub1||WD repeat protein Lub1|Schizosaccharomyces po... 25 5.1
SPCC18B5.10c |||TREX complex subunit Tex1 |Schizosaccharomyces p... 25 5.1
SPAC17D4.01 |pex7|SPAC1834.12|peroxin-7 |Schizosaccharomyces pom... 25 5.1
SPBC216.05 |rad3||ATR checkpoint kinase|Schizosaccharomyces pomb... 25 5.1
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 25 6.7
SPBC3D6.12 |||U3 snoRNA associted protein Dip2 |Schizosaccharomy... 25 8.9
SPAC4D7.03 |pop2|sud1|F-box/WD repeat protein Pop2|Schizosacchar... 25 8.9
SPCC16A11.02 |utp13|SPCC63.16|U3 snoRNP-associated protein Utp13... 25 8.9
SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase Tor2|S... 25 8.9
SPBC1703.06 |pof10||F-box protein Pof10|Schizosaccharomyces pomb... 25 8.9
SPAPB1E7.02c |mcl1|slr3|DNA polymerase alpha accessory factor Mc... 25 8.9
SPBC32H8.07 |git5|gpb1|heterotrimeric G protein beta subunit Git... 25 8.9
>SPBC16A3.05c |rae1||RNA export factor Rae1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 352
Score = 83.8 bits (198), Expect = 1e-17
Identities = 40/95 (42%), Positives = 57/95 (60%)
Frame = +1
Query: 106 VGNGGNNPNKDLEVNSPPDDTVSALEFSPASIPQTFLIAGSWDCQVRCWEVEGSGNTVPK 285
V N + KD+EV PP+D++S L FSP + +L A SWD +VR +EV+ +G ++ K
Sbjct: 12 VSNATGDLKKDVEVAQPPEDSISDLAFSPQA---EYLAASSWDSKVRIYEVQATGQSIGK 68
Query: 286 AVQSMDGPILDVAWHDDGSKVFMASTDKSVNVLGL 390
A+ GP+L V W DG+KV S DKS V +
Sbjct: 69 ALYEHQGPVLSVNWSRDGTKVASGSVDKSAKVFDI 103
Score = 31.1 bits (67), Expect = 0.10
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 6/61 (9%)
Frame = +1
Query: 160 DDTVSALEFSPASIPQTFLIAGSWDCQVRCWEVEGSGN----TVPKAVQSMD--GPILDV 321
DD V + F A L GSWD ++ W++ S ++P+ V +MD P+L V
Sbjct: 115 DDAVRCVRFVEAMGTSPILATGSWDKTLKYWDLRQSTPIATVSLPERVYAMDCVHPLLTV 174
Query: 322 A 324
A
Sbjct: 175 A 175
>SPBC713.04c |||U3 snoRNP-associated protein
Utp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 854
Score = 42.3 bits (95), Expect = 4e-05
Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Frame = +1
Query: 139 LEVNSPPDDTVSALEFSPASIPQTFLIAGSWDCQVRCWEV-EGSGNTVPKAVQSMDGPIL 315
LE + + VS+L F+ + + L +GSWD VR W++ SG P + S +L
Sbjct: 460 LETLAGHEGPVSSLSFNSSG---SLLASGSWDKTVRIWDIFSRSGIVEPLPIPS---DVL 513
Query: 316 DVAWHDDGSKVFMASTD 366
+A+H DG +V +AS D
Sbjct: 514 SLAFHPDGKEVCVASLD 530
Score = 27.1 bits (57), Expect = 1.7
Identities = 18/73 (24%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
Frame = +1
Query: 172 SALEFSPASIPQT--FLIAGSWDC-QVRCWEVEGSGNTVPKAVQSMDGPILDVAWHDDGS 342
S ++FS ++ + + AGS D ++ W V+ +G + + + +GP+ ++++ GS
Sbjct: 423 SRVQFSCIAVDPSGEIVCAGSQDSFEIFMWSVQ-TGQLL-ETLAGHEGPVSSLSFNSSGS 480
Query: 343 KVFMASTDKSVNV 381
+ S DK+V +
Sbjct: 481 LLASGSWDKTVRI 493
>SPBC6B1.10 |prp17||splicing factor Prp17|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 558
Score = 37.9 bits (84), Expect = 9e-04
Identities = 22/71 (30%), Positives = 36/71 (50%)
Frame = +1
Query: 169 VSALEFSPASIPQTFLIAGSWDCQVRCWEVEGSGNTVPKAVQSMDGPILDVAWHDDGSKV 348
+S L F P S L++GS D Q++ WEV + + + Q PI D+++ DG
Sbjct: 269 ISCLRFFPIS--GHLLLSGSMDNQIKIWEVYHDRSLL-RTFQGHARPIRDLSFSQDGRSF 325
Query: 349 FMASTDKSVNV 381
S DK++ +
Sbjct: 326 LSTSFDKTIKL 336
>SPBC354.03 |swd3||WD repeat protein Swd3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 380
Score = 37.9 bits (84), Expect = 9e-04
Identities = 22/66 (33%), Positives = 36/66 (54%)
Frame = +1
Query: 169 VSALEFSPASIPQTFLIAGSWDCQVRCWEVEGSGNTVPKAVQSMDGPILDVAWHDDGSKV 348
VS+++F+P T L++GSWD VR W ++ T + + + PI+ V+ DG+
Sbjct: 141 VSSIDFNPLG---TLLVSGSWDETVRIWNLQ--DGTCLRMLPAHSEPIISVSISADGTLC 195
Query: 349 FMASTD 366
AS D
Sbjct: 196 ATASYD 201
>SPAC630.14c |tup12||transcriptional corepressor Tup12
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 586
Score = 33.9 bits (74), Expect = 0.015
Identities = 24/89 (26%), Positives = 42/89 (47%), Gaps = 3/89 (3%)
Frame = +1
Query: 160 DDTVSALEFSPASIPQTFLIAGSWDCQVRCWEVEGSGNTVPKAVQSMDGPILDVAWHDDG 339
DD V+ + FSP F+ AGS D +R W S T+ + + + + VA+ DG
Sbjct: 417 DDGVTTVMFSPDG---QFIAAGSLDKVIRIWT---SSGTLVEQLHGHEESVYSVAFSPDG 470
Query: 340 SKVFMASTDKSVNVLGL---GHADPNVYQ 417
+ S D ++ + L + P++Y+
Sbjct: 471 KYLVSGSLDNTIKLWELQCVSNVAPSMYK 499
>SPAC57A10.05c |pof1||F-box protein Pof1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 605
Score = 31.9 bits (69), Expect = 0.059
Identities = 18/61 (29%), Positives = 28/61 (45%)
Frame = +1
Query: 208 TFLIAGSWDCQVRCWEVEGSGNTVPKAVQSMDGPILDVAWHDDGSKVFMASTDKSVNVLG 387
T L++GS DC V+ W G G + ++ GP+ V D V S D ++ +
Sbjct: 364 TLLVSGSADCTVKLWHFSG-GKRI--TLRGHTGPVNSVRIIRDRGLVLSGSDDSTIKIWS 420
Query: 388 L 390
L
Sbjct: 421 L 421
>SPAC25H1.08c |||ribosome biogenesis protein
Sqt1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 399
Score = 31.5 bits (68), Expect = 0.077
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = +1
Query: 199 IPQT-FLIAGSWDCQVRCWEVEGSGNTVPKAVQSMDGPILDVAWHDDGSKVFMASTDKSV 375
+P T +L+ DC +R W+V SG + + + PIL +A DG +V S D +
Sbjct: 335 LPNTPYLLTACADCVIRKWDVR-SGQLLGEYTGHQE-PILCMAITPDGKRVVTGSDDTEL 392
Query: 376 NVLGLGH 396
V H
Sbjct: 393 LVFDCEH 399
>SPAC6B12.15 |cpc2|rkp1|RACK1 homologue Cpc2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 314
Score = 30.7 bits (66), Expect = 0.14
Identities = 16/62 (25%), Positives = 29/62 (46%)
Frame = +1
Query: 196 SIPQTFLIAGSWDCQVRCWEVEGSGNTVPKAVQSMDGPILDVAWHDDGSKVFMASTDKSV 375
S + ++ SWD +R W++E T + D +L V+ D +V S DK++
Sbjct: 72 SFDSHYALSASWDKTIRLWDLEKGECTHQFVGHTSD--VLSVSISPDNRQVVSGSRDKTI 129
Query: 376 NV 381
+
Sbjct: 130 KI 131
Score = 30.7 bits (66), Expect = 0.14
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +1
Query: 163 DTVSALEFSPASIPQTFLIAGSWDCQVRCWEVE 261
D VS + FSP TF+ AG WD V+ W++E
Sbjct: 149 DWVSCVRFSPNPDNLTFVSAG-WDKAVKVWDLE 180
>SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5
Taf72|Schizosaccharomyces pombe|chr 3|||Manual
Length = 643
Score = 30.3 bits (65), Expect = 0.18
Identities = 19/65 (29%), Positives = 29/65 (44%)
Frame = +1
Query: 211 FLIAGSWDCQVRCWEVEGSGNTVPKAVQSMDGPILDVAWHDDGSKVFMASTDKSVNVLGL 390
+L++ S D R W V+ T A + GP+ DVA+ G AS D++ +
Sbjct: 393 YLLSCSEDASARLWSVDTK--TALVAYKGHTGPVWDVAFGPFGHYFATASHDQTAQLWSC 450
Query: 391 GHADP 405
H P
Sbjct: 451 DHIYP 455
Score = 28.7 bits (61), Expect = 0.55
Identities = 14/53 (26%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +1
Query: 160 DDTVSALEFSPASIPQTFLIAGSWDCQVRCWEVEGSGNTVPK--AVQSMDGPI 312
++ ++ EFSP S T + G + +R W ++ ++PK +V+ DG +
Sbjct: 324 NNNMNCAEFSPDS---TMIACGFQESYIRLWSIKADKKSLPKSTSVEDSDGSV 373
Score = 27.1 bits (57), Expect = 1.7
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +1
Query: 169 VSALEFSPASIPQTFLIAGSWDCQVRCWEV 258
+ +L FS S T L++G DC VR W+V
Sbjct: 550 IYSLSFSRES---TVLVSGGSDCTVRAWDV 576
>SPAC23H3.08c |bub3||mitotic spindle checkpoint protein
Bub3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 320
Score = 29.5 bits (63), Expect = 0.31
Identities = 20/68 (29%), Positives = 32/68 (47%)
Frame = +1
Query: 217 IAGSWDCQVRCWEVEGSGNTVPKAVQSMDGPILDVAWHDDGSKVFMASTDKSVNVLGLGH 396
I+GSWD R W+V + Q ++G D G K+F +S+ ++ VLG
Sbjct: 111 ISGSWDKSFRVWDV--------RVKQPVEG-------QDIGKKIFASSSRDNILVLGCSE 155
Query: 397 ADPNVYQV 420
+ VY +
Sbjct: 156 RENLVYDI 163
>SPAC3H5.08c |||WD repeat protein Wdr44 family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 855
Score = 28.7 bits (61), Expect = 0.55
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +1
Query: 163 DTVSALEFSPASIPQTFLIAGSWDCQVRCWEVE 261
D V+++ F P F ++GS DC++R W ++
Sbjct: 350 DFVTSIAFHPKD--DRFFLSGSLDCKLRLWSIK 380
>SPAC26H5.03 |||WD repeat protein Cac2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 512
Score = 28.7 bits (61), Expect = 0.55
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +1
Query: 283 KAVQSMDGPILDVAWHDDGSKVFMASTDKSVNVL 384
+AV + D+AW+DDG+ + M S D +V+
Sbjct: 413 RAVNLHYSNLTDIAWNDDGNVLLMTSIDGFCSVI 446
>SPAC4F10.18 |||WD repeat protein, human NUP37
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 391
Score = 27.9 bits (59), Expect = 0.95
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +1
Query: 259 EGSGNTVPKAVQSMDGPILDVAWHDDGSKVFMASTDKSV 375
E N++P +Q + PI+D WH DGS + +A T+ SV
Sbjct: 346 EKDSNSIP--IQ-LGMPIVDFCWHQDGSHLAIA-TEGSV 380
>SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 502
Score = 27.9 bits (59), Expect = 0.95
Identities = 14/62 (22%), Positives = 26/62 (41%)
Frame = +1
Query: 196 SIPQTFLIAGSWDCQVRCWEVEGSGNTVPKAVQSMDGPILDVAWHDDGSKVFMASTDKSV 375
S L++ S D ++ W+V + + + + V W DG +V DK+V
Sbjct: 440 STDSRLLVSSSQDTTLKVWDVRSK--KMKFDLPGHEDQVFAVDWSPDGQRVASGGADKAV 497
Query: 376 NV 381
+
Sbjct: 498 RI 499
>SPAC2E1P5.05 |||U3 snoRNP-associated protein Rrp9
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 524
Score = 27.5 bits (58), Expect = 1.3
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Frame = +1
Query: 187 SPASIPQTFLIA-GSWDCQVRCWEV-EGSGNTVPKAV 291
S A+IP + L A GSWD +R W++ EG + P +
Sbjct: 416 SLAAIPYSNLFASGSWDGNIRLWKIAEGLRSFEPLTI 452
>SPCC613.12c |raf1|dos1, cmc1, clr8|Rik1-associated factor
Raf1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 638
Score = 27.5 bits (58), Expect = 1.3
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = +1
Query: 142 EVNSPPDDTVSALEFSPASIPQTFLIAGSWDCQVRCWEVEGS 267
+V T+S L FS ++ FL G++D V+ W++EG+
Sbjct: 293 QVGEKEYSTISDLCFSKGNL---FLYTGAFDNAVKVWDMEGN 331
>SPBC1773.12 |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 594
Score = 27.1 bits (57), Expect = 1.7
Identities = 11/40 (27%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +2
Query: 275 LFPKQYRVWMDPY*MLPGMMMVVKC-SWLLQIKVSTCWDL 391
LFP+ + W+ Y +P +C W + +++CW L
Sbjct: 158 LFPQSFPTWISVYRNVPEKAWANRCVEWYFRY-INSCWPL 196
>SPAC4D7.05 |sum1|tif34|translation initiation factor
eIF3i|Schizosaccharomyces pombe|chr 1|||Manual
Length = 328
Score = 27.1 bits (57), Expect = 1.7
Identities = 10/34 (29%), Positives = 19/34 (55%)
Frame = +1
Query: 280 PKAVQSMDGPILDVAWHDDGSKVFMASTDKSVNV 381
P +Q + P+ + ++ DG +F + DK +NV
Sbjct: 3 PIILQGHERPLTQIKYNHDGDLLFSCAKDKVINV 36
>SPBC18H10.05 |||WD repeat protein Wdr44 family, WD repeat
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 586
Score = 26.6 bits (56), Expect = 2.2
Identities = 9/33 (27%), Positives = 20/33 (60%)
Frame = +1
Query: 160 DDTVSALEFSPASIPQTFLIAGSWDCQVRCWEV 258
++ V+ + F P I + ++GS DC+++ W +
Sbjct: 295 NEIVTCVAFHP--IDDRYFVSGSLDCKIQLWSI 325
>SPAC343.04c |gnr1||heterotrimeric G protein beta subunit
Gnr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 507
Score = 26.6 bits (56), Expect = 2.2
Identities = 15/54 (27%), Positives = 26/54 (48%)
Frame = +1
Query: 217 IAGSWDCQVRCWEVEGSGNTVPKAVQSMDGPILDVAWHDDGSKVFMASTDKSVN 378
I GS DC + W + G + D I D+A DG+K+++ ++ +N
Sbjct: 312 ITGSPDCHITHWSLNGE-----ILYKWEDVNIYDMALTSDGTKLYIVGFEQLIN 360
>SPBP19A11.02c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 244
Score = 26.2 bits (55), Expect = 2.9
Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
Frame = -1
Query: 419 TWYTFGSAWPSPNTLTLLSVEAMNTLLPS-SCQATSNMGPSILCTALGTVFPDPSTSQHR 243
T YT G T+T + + N S S +T S+ T + ++ P PSTS +
Sbjct: 20 TEYTPGFTTDVATTVTPTPLPSANVTTTSFSSASTETSTHSVTSTNITSIVPPPSTSHNS 79
Query: 242 T 240
T
Sbjct: 80 T 80
>SPAC10F6.01c ||SPAC4C5.05c|sulfite reductase beta subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1473
Score = 25.8 bits (54), Expect = 3.8
Identities = 16/69 (23%), Positives = 34/69 (49%)
Frame = +1
Query: 133 KDLEVNSPPDDTVSALEFSPASIPQTFLIAGSWDCQVRCWEVEGSGNTVPKAVQSMDGPI 312
++L+ D+ ++ L S+ +T + S+ +VR + S N + K ++ + GP
Sbjct: 670 RELKTFLERDNYLTQLTLRVPSLART--LTQSFGAEVRHQQNVDSRNALNKLIEGLSGPP 727
Query: 313 LDVAWHDDG 339
L + + DG
Sbjct: 728 LTILFASDG 736
>SPBC887.04c |lub1||WD repeat protein Lub1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 25.4 bits (53), Expect = 5.1
Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Frame = +1
Query: 187 SPASIPQTFLIAGSWDCQVRCWEVEGSGNTVPKAVQSMDGPILDVAWHDDGSKVFM-AST 363
S +++ +I GSWD R W + G V K QS +L + G +F+ S
Sbjct: 103 SASALNSETIITGSWDSTARVWAL-GQCKYVLKGHQSSVWAVLAL-----GEDIFITGSA 156
Query: 364 DKSVNV 381
DK + +
Sbjct: 157 DKLIKI 162
>SPCC18B5.10c |||TREX complex subunit Tex1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 309
Score = 25.4 bits (53), Expect = 5.1
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +1
Query: 289 VQSMDGPILDVAWHDDGSKVFMASTDKSVNV 381
+Q GPI + W+ GS++ +S+ SV V
Sbjct: 20 LQGQQGPIRSLGWNLSGSRLASSSSSGSVLV 50
>SPAC17D4.01 |pex7|SPAC1834.12|peroxin-7 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 308
Score = 25.4 bits (53), Expect = 5.1
Identities = 12/45 (26%), Positives = 22/45 (48%)
Frame = +1
Query: 196 SIPQTFLIAGSWDCQVRCWEVEGSGNTVPKAVQSMDGPILDVAWH 330
++ + ++ GSWD ++ W + N+V + IL VA H
Sbjct: 113 TVDRRIVVTGSWDGTIKLW-LGNLPNSVQTLNNGSNSRILTVATH 156
>SPBC216.05 |rad3||ATR checkpoint kinase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 2386
Score = 25.4 bits (53), Expect = 5.1
Identities = 11/41 (26%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
Frame = +1
Query: 145 VNSPPDDTVSALEFSPASIPQTFLI---AGSWDCQVRCWEV 258
++ P + +L F S Q L+ +G+WD + C+E+
Sbjct: 1432 IDDPDEIEAVSLNFHDYSFDQQLLLHENSGTWDSALSCYEI 1472
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 25.0 bits (52), Expect = 6.7
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = -1
Query: 392 PSPNTLTLLSVEAMNTLLPSSCQATSNMGPSILCTALGTVFPDPSTS 252
PS +L++ S +T +S + S++ SI ++ P PSTS
Sbjct: 587 PSSTSLSISSSSTSSTFSSASTSSPSSISSSISSSSTILSSPTPSTS 633
>SPBC3D6.12 |||U3 snoRNA associted protein Dip2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 922
Score = 24.6 bits (51), Expect = 8.9
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +1
Query: 196 SIPQTFLIAGSWDCQVRCWE 255
++ TF+++GS D +R WE
Sbjct: 667 AVGPTFVVSGSHDHSIRLWE 686
>SPAC4D7.03 |pop2|sud1|F-box/WD repeat protein
Pop2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 703
Score = 24.6 bits (51), Expect = 8.9
Identities = 16/59 (27%), Positives = 28/59 (47%)
Frame = +1
Query: 214 LIAGSWDCQVRCWEVEGSGNTVPKAVQSMDGPILDVAWHDDGSKVFMASTDKSVNVLGL 390
L++GS+D +R W V +G + ++ I V + + + S DKS+ V L
Sbjct: 520 LVSGSYDSSIRIWRV-STGECL-YHLRGHSLRIYSVLYEPERNICISGSMDKSIRVWDL 576
>SPCC16A11.02 |utp13|SPCC63.16|U3 snoRNP-associated protein Utp13
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 777
Score = 24.6 bits (51), Expect = 8.9
Identities = 12/46 (26%), Positives = 22/46 (47%)
Frame = +1
Query: 124 NPNKDLEVNSPPDDTVSALEFSPASIPQTFLIAGSWDCQVRCWEVE 261
N ++ + V + L F P +FL++GS D V+ W ++
Sbjct: 177 NSSRSMAVFEGHSSVIRGLTFEPTG---SFLLSGSRDKTVQVWNIK 219
>SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase
Tor2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2337
Score = 24.6 bits (51), Expect = 8.9
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = -1
Query: 305 PSILCTALGTVFPDPSTSQHRT 240
P+++ TAL ++ DPS + H T
Sbjct: 804 PTVVITALMSILKDPSLTIHHT 825
>SPBC1703.06 |pof10||F-box protein Pof10|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 662
Score = 24.6 bits (51), Expect = 8.9
Identities = 11/36 (30%), Positives = 20/36 (55%), Gaps = 3/36 (8%)
Frame = +1
Query: 163 DTVSALEFSPASIPQTF---LIAGSWDCQVRCWEVE 261
D+V+ ++ +P T ++ GS D V CW+V+
Sbjct: 218 DSVTCIDALTGDLPPTGEIGMVTGSDDGSVHCWDVK 253
>SPAPB1E7.02c |mcl1|slr3|DNA polymerase alpha accessory factor
Mcl1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 815
Score = 24.6 bits (51), Expect = 8.9
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +1
Query: 307 PILDVAWHDDGSKVFMASTDKSVNVL 384
PI DVA+ DG+ + +AS + +V V+
Sbjct: 97 PIRDVAYSVDGNWIAIASDETAVKVV 122
>SPBC32H8.07 |git5|gpb1|heterotrimeric G protein beta subunit
Git5|Schizosaccharomyces pombe|chr 2|||Manual
Length = 305
Score = 24.6 bits (51), Expect = 8.9
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +1
Query: 208 TFLIAGSWDCQVRCWEVEG 264
T L GSWD VR W G
Sbjct: 287 TMLATGSWDECVRLWSSSG 305
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,485,828
Number of Sequences: 5004
Number of extensions: 55272
Number of successful extensions: 206
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 186
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 203
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 208287218
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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