Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_I12
(515 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z80216-3|CAB02280.1| 373|Caenorhabditis elegans Hypothetical pr... 75 2e-14
Z69664-1|CAA93514.1| 325|Caenorhabditis elegans Hypothetical pr... 35 0.040
Z81099-1|CAB03187.1| 600|Caenorhabditis elegans Hypothetical pr... 33 0.092
AL032648-5|CAA21698.1| 343|Caenorhabditis elegans Hypothetical ... 33 0.16
Z78544-3|CAB01760.1| 395|Caenorhabditis elegans Hypothetical pr... 31 0.37
AF040652-5|AAB95022.2| 378|Caenorhabditis elegans Hypothetical ... 31 0.65
Z81067-5|CAD92378.1| 965|Caenorhabditis elegans Hypothetical pr... 30 0.85
Z66561-2|CAA91460.1| 331|Caenorhabditis elegans Hypothetical pr... 30 0.85
AL132949-24|CAB61102.1| 860|Caenorhabditis elegans Hypothetical... 30 1.1
Z81494-11|CAN99681.1| 455|Caenorhabditis elegans Hypothetical p... 29 2.0
Z81494-7|CAI79161.1| 387|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z81494-6|CAC42275.1| 451|Caenorhabditis elegans Hypothetical pr... 29 2.0
U42835-5|AAO61444.1| 517|Caenorhabditis elegans Uncoordinated p... 29 2.6
U42835-4|AAA83588.1| 611|Caenorhabditis elegans Uncoordinated p... 29 2.6
AF324437-1|AAK11613.1| 611|Caenorhabditis elegans UNC-78 protein. 29 2.6
AF106576-4|AAC78176.1| 473|Caenorhabditis elegans Hypothetical ... 29 2.6
AF067216-8|AAN84852.1| 954|Caenorhabditis elegans Hypothetical ... 29 2.6
AF067216-7|AAC17521.1| 1262|Caenorhabditis elegans Hypothetical ... 29 2.6
AC024818-3|AAF60780.2| 453|Caenorhabditis elegans Hypothetical ... 28 3.4
Z81116-13|CAB03300.1| 245|Caenorhabditis elegans Hypothetical p... 28 4.6
Z81113-5|CAB03282.3| 404|Caenorhabditis elegans Hypothetical pr... 28 4.6
Z74030-18|CAA98448.1| 494|Caenorhabditis elegans Hypothetical p... 28 4.6
Z73970-6|CAA98247.1| 494|Caenorhabditis elegans Hypothetical pr... 28 4.6
Z37139-8|CAA85487.1| 376|Caenorhabditis elegans Hypothetical pr... 28 4.6
U88170-9|AAB42243.2| 348|Caenorhabditis elegans Serpentine rece... 28 4.6
U49954-1|AAA93426.1| 388|Caenorhabditis elegans Hypothetical pr... 28 4.6
AF164430-1|AAF82632.1| 404|Caenorhabditis elegans LIS-1 protein. 28 4.6
AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical ... 28 4.6
Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical p... 27 6.0
Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical p... 27 6.0
Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical p... 27 6.0
Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical pr... 27 6.0
Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical pr... 27 6.0
Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical pr... 27 6.0
X15423-1|CAA33463.1| 6048|Caenorhabditis elegans twitchin protein. 27 6.0
U39997-8|AAA81100.1| 718|Caenorhabditis elegans Hypothetical pr... 27 6.0
AL021487-10|CAA16357.2| 1592|Caenorhabditis elegans Hypothetical... 27 6.0
Z81490-1|CAB04014.1| 510|Caenorhabditis elegans Hypothetical pr... 27 8.0
AF330595-1|AAK00353.1| 510|Caenorhabditis elegans SMU-1 protein. 27 8.0
>Z80216-3|CAB02280.1| 373|Caenorhabditis elegans Hypothetical
protein F10G8.3 protein.
Length = 373
Score = 75.4 bits (177), Expect = 2e-14
Identities = 33/87 (37%), Positives = 48/87 (55%)
Frame = +1
Query: 130 NKDLEVNSPPDDTVSALEFSPASIPQTFLIAGSWDCQVRCWEVEGSGNTVPKAVQSMDGP 309
N D V+ P+DT+ ++FSP + L GSWD +R W + KA Q++ P
Sbjct: 32 NDDFLVDGAPEDTIQVIKFSPTPQDKPMLACGSWDGTIRVWMFNDANTFEGKAQQNIPAP 91
Query: 310 ILDVAWHDDGSKVFMASTDKSVNVLGL 390
ILD+AW +D SK+F+A DK + L
Sbjct: 92 ILDIAWIEDSSKIFIACADKEARLWDL 118
Score = 51.2 bits (117), Expect = 4e-07
Identities = 24/49 (48%), Positives = 27/49 (55%)
Frame = +2
Query: 368 KVSTCWDLAMQTQTCTRCASATIAPVKTCHWIKASNYTCLMTASWDKTL 514
K + WDLA PVKTCHWI +NY CLMT S+DKTL
Sbjct: 111 KEARLWDLASNQ---VAVVGTHDGPVKTCHWINGNNYQCLMTGSFDKTL 156
>Z69664-1|CAA93514.1| 325|Caenorhabditis elegans Hypothetical
protein K04D7.1 protein.
Length = 325
Score = 34.7 bits (76), Expect = 0.040
Identities = 17/57 (29%), Positives = 30/57 (52%)
Frame = +1
Query: 211 FLIAGSWDCQVRCWEVEGSGNTVPKAVQSMDGPILDVAWHDDGSKVFMASTDKSVNV 381
F ++GSWD +R W++ +T + D +L VA+ D ++ S DKS+ +
Sbjct: 83 FALSGSWDKTLRLWDLNQGVSTRQFISHTKD--VLSVAFSADNRQIVSGSRDKSIKL 137
Score = 27.9 bits (59), Expect = 4.6
Identities = 20/81 (24%), Positives = 34/81 (41%), Gaps = 5/81 (6%)
Frame = +1
Query: 154 PPDDTVSALEFSPASIPQTFLIAGS---WDCQVRCWEVEGSGNTVPKAVQSMDGP--ILD 318
P +D ++A+ FSP + S WD + + E+E + + S +
Sbjct: 237 PGNDVINAMSFSPNRYWLCAAVGSSIKIWDLEDKK-EIEELKPEIASSGSSRGSSPQCIS 295
Query: 319 VAWHDDGSKVFMASTDKSVNV 381
+AW DG +F TD + V
Sbjct: 296 LAWSQDGQTLFAGYTDNIIRV 316
>Z81099-1|CAB03187.1| 600|Caenorhabditis elegans Hypothetical
protein K08F9.2 protein.
Length = 600
Score = 33.5 bits (73), Expect = 0.092
Identities = 18/70 (25%), Positives = 31/70 (44%), Gaps = 2/70 (2%)
Frame = +1
Query: 145 VNSPPDDTVSALEFSPASIPQTFLIAGSWDCQ--VRCWEVEGSGNTVPKAVQSMDGPILD 318
+NS T A + + A I T S D Q +R W+ S + + + GP+ D
Sbjct: 49 LNSADIYTEHAHQTTVAKISPTGFYCASGDTQGNIRIWDTTQSTHILKHTIPVFSGPVKD 108
Query: 319 VAWHDDGSKV 348
+AW + ++
Sbjct: 109 IAWDSESKRI 118
Score = 28.7 bits (61), Expect = 2.6
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +1
Query: 304 GPILDVAWHDDGSKVFMASTDKSVNV 381
G I +AW D S++ AS DKSV +
Sbjct: 238 GSIFALAWSPDQSRIATASADKSVKI 263
>AL032648-5|CAA21698.1| 343|Caenorhabditis elegans Hypothetical
protein Y54G9A.6 protein.
Length = 343
Score = 32.7 bits (71), Expect = 0.16
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +1
Query: 169 VSALEFSPASIPQTFLIAGSWDCQVRCWEVEGSGNTVPKAVQ-SMDGPILDVAWH 330
V +EF+P S + +++G WD V+ W+ GN ++V S +DV H
Sbjct: 112 VRCMEFNPMS---SLIVSGGWDSSVKLWDARSYGNGAIESVNVSSSVYAMDVLKH 163
>Z78544-3|CAB01760.1| 395|Caenorhabditis elegans Hypothetical
protein K04G11.4 protein.
Length = 395
Score = 31.5 bits (68), Expect = 0.37
Identities = 19/80 (23%), Positives = 36/80 (45%)
Frame = +1
Query: 142 EVNSPPDDTVSALEFSPASIPQTFLIAGSWDCQVRCWEVEGSGNTVPKAVQSMDGPILDV 321
E+ + ++S ++FSP ++ +GS DC ++ W ++ K + I +
Sbjct: 101 EIPNAHKKSISGIKFSPDG---RYMGSGSADCSIKIWRMD---FVYEKTLMGHRLGINEF 154
Query: 322 AWHDDGSKVFMASTDKSVNV 381
+W D + S DK V V
Sbjct: 155 SWSSDSKLIVSCSDDKLVKV 174
>AF040652-5|AAB95022.2| 378|Caenorhabditis elegans Hypothetical
protein T05A8.5 protein.
Length = 378
Score = 30.7 bits (66), Expect = 0.65
Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 4/76 (5%)
Frame = +1
Query: 124 NPNKDLEVNSPPDDTVSALEFSPASIPQTFLIAGSWDCQVRCWEVEGSGNTVPKAVQSMD 303
NP + E + V++L + L + S D Q+R W++E G V K + + D
Sbjct: 259 NPRQSREARGH-EGNVTSLSIVQMDQTKRLLASVSADRQIRLWKIEEDGQAVLKPIWNED 317
Query: 304 GPI----LDVAWHDDG 339
P+ L V + DG
Sbjct: 318 VPLEADNLQVCSYPDG 333
Score = 27.5 bits (58), Expect = 6.0
Identities = 17/62 (27%), Positives = 32/62 (51%)
Frame = +1
Query: 196 SIPQTFLIAGSWDCQVRCWEVEGSGNTVPKAVQSMDGPILDVAWHDDGSKVFMASTDKSV 375
SI + ++GS DC V+ W++E + + + + +A+ +G+ V S DKSV
Sbjct: 151 SINENQFMSGSRDCSVKIWDLESAKCVRTQTINR--NLVTHMAY--NGNLVAQTSEDKSV 206
Query: 376 NV 381
+
Sbjct: 207 RL 208
>Z81067-5|CAD92378.1| 965|Caenorhabditis elegans Hypothetical
protein F23A7.7 protein.
Length = 965
Score = 30.3 bits (65), Expect = 0.85
Identities = 21/78 (26%), Positives = 39/78 (50%)
Frame = -3
Query: 504 SQEAVMRQV*FEAFIQWHVLTGAIVALAHLVHVWVCMAKSQHVDTFICRSHEHFTTIIMP 325
S+ AVMR + F + Q + ++ +HL+ V VC +++++ C S + +I
Sbjct: 146 SKAAVMRYLDFHSVPQERTVKKFLLEDSHLMRVEVCNLCARNLEICECGSQQEKCELIY- 204
Query: 324 GNI*YGSIHTLYCFGNSV 271
GN+ L C+GN +
Sbjct: 205 GNLKKWLELILNCYGNII 222
>Z66561-2|CAA91460.1| 331|Caenorhabditis elegans Hypothetical
protein F08G12.2 protein.
Length = 331
Score = 30.3 bits (65), Expect = 0.85
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +1
Query: 163 DTVSALEFSPASIPQTFLIAGSWDCQVRCWEV 258
DT++ + SP+ F+I+ S DC VR W++
Sbjct: 208 DTITGISLSPSG---KFIISNSMDCTVRQWDI 236
>AL132949-24|CAB61102.1| 860|Caenorhabditis elegans Hypothetical
protein Y53F4B.28 protein.
Length = 860
Score = 29.9 bits (64), Expect = 1.1
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = -3
Query: 507 LSQEAVMRQV*FEAFIQW-HVLTGAI-VALAHLVHVWVCMAKSQHVDT 370
+SQEA R + E FI + H + V LA + H+ +C+A HV+T
Sbjct: 447 ISQEAHTRSI-LEVFIDFLHTPVAKLAVVLAFIGHILICLALVSHVNT 493
>Z81494-11|CAN99681.1| 455|Caenorhabditis elegans Hypothetical
protein F02E9.10c protein.
Length = 455
Score = 29.1 bits (62), Expect = 2.0
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = +1
Query: 139 LEVNSPPDDTVSALEFSPASIPQTFLIAGSWDCQVRCWEVEGSGNTVP 282
+ + + T+SAL FSP S L++G D + + + G G P
Sbjct: 290 MSITNEHTSTISALSFSPTS---RHLLSGGDDAMILIYRIPGVGENTP 334
>Z81494-7|CAI79161.1| 387|Caenorhabditis elegans Hypothetical
protein F02E9.10b protein.
Length = 387
Score = 29.1 bits (62), Expect = 2.0
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = +1
Query: 139 LEVNSPPDDTVSALEFSPASIPQTFLIAGSWDCQVRCWEVEGSGNTVP 282
+ + + T+SAL FSP S L++G D + + + G G P
Sbjct: 226 MSITNEHTSTISALSFSPTS---RHLLSGGDDAMILIYRIPGVGENTP 270
>Z81494-6|CAC42275.1| 451|Caenorhabditis elegans Hypothetical
protein F02E9.10a protein.
Length = 451
Score = 29.1 bits (62), Expect = 2.0
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = +1
Query: 139 LEVNSPPDDTVSALEFSPASIPQTFLIAGSWDCQVRCWEVEGSGNTVP 282
+ + + T+SAL FSP S L++G D + + + G G P
Sbjct: 290 MSITNEHTSTISALSFSPTS---RHLLSGGDDAMILIYRIPGVGENTP 334
>U42835-5|AAO61444.1| 517|Caenorhabditis elegans Uncoordinated
protein 78, isoform b protein.
Length = 517
Score = 28.7 bits (61), Expect = 2.6
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = +1
Query: 304 GPILDVAWHDDGSKVFMASTDKSVNV 381
G + + W DG+K+ AS DK++ +
Sbjct: 240 GSVFGLTWSPDGTKIASASADKTIKI 265
Score = 28.3 bits (60), Expect = 3.4
Identities = 12/71 (16%), Positives = 30/71 (42%)
Frame = +1
Query: 136 DLEVNSPPDDTVSALEFSPASIPQTFLIAGSWDCQVRCWEVEGSGNTVPKAVQSMDGPIL 315
D E+ + + + SP+ + +G VR W+ + + + + GP+
Sbjct: 51 DTEIYTEHSHQTTVAKTSPSGY---YCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVK 107
Query: 316 DVAWHDDGSKV 348
D++W + ++
Sbjct: 108 DISWDSESKRI 118
>U42835-4|AAA83588.1| 611|Caenorhabditis elegans Uncoordinated
protein 78, isoform a protein.
Length = 611
Score = 28.7 bits (61), Expect = 2.6
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = +1
Query: 304 GPILDVAWHDDGSKVFMASTDKSVNV 381
G + + W DG+K+ AS DK++ +
Sbjct: 240 GSVFGLTWSPDGTKIASASADKTIKI 265
Score = 28.3 bits (60), Expect = 3.4
Identities = 12/71 (16%), Positives = 30/71 (42%)
Frame = +1
Query: 136 DLEVNSPPDDTVSALEFSPASIPQTFLIAGSWDCQVRCWEVEGSGNTVPKAVQSMDGPIL 315
D E+ + + + SP+ + +G VR W+ + + + + GP+
Sbjct: 51 DTEIYTEHSHQTTVAKTSPSGY---YCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVK 107
Query: 316 DVAWHDDGSKV 348
D++W + ++
Sbjct: 108 DISWDSESKRI 118
>AF324437-1|AAK11613.1| 611|Caenorhabditis elegans UNC-78 protein.
Length = 611
Score = 28.7 bits (61), Expect = 2.6
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = +1
Query: 304 GPILDVAWHDDGSKVFMASTDKSVNV 381
G + + W DG+K+ AS DK++ +
Sbjct: 240 GSVFGLTWSPDGTKIASASADKTIKI 265
Score = 28.3 bits (60), Expect = 3.4
Identities = 12/71 (16%), Positives = 30/71 (42%)
Frame = +1
Query: 136 DLEVNSPPDDTVSALEFSPASIPQTFLIAGSWDCQVRCWEVEGSGNTVPKAVQSMDGPIL 315
D E+ + + + SP+ + +G VR W+ + + + + GP+
Sbjct: 51 DTEIYTEHSHQTTVAKTSPSGY---YCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVK 107
Query: 316 DVAWHDDGSKV 348
D++W + ++
Sbjct: 108 DISWDSESKRI 118
>AF106576-4|AAC78176.1| 473|Caenorhabditis elegans Hypothetical
protein W07E6.2 protein.
Length = 473
Score = 28.7 bits (61), Expect = 2.6
Identities = 19/74 (25%), Positives = 34/74 (45%)
Frame = +1
Query: 169 VSALEFSPASIPQTFLIAGSWDCQVRCWEVEGSGNTVPKAVQSMDGPILDVAWHDDGSKV 348
V+ + FSP + ++ + S+D V+ W G +++ GP+ VAW D +
Sbjct: 363 VNQVVFSPDT---RYIASASFDKSVKLWC--GRTGKYLASLRGHVGPVYQVAWSADSRLL 417
Query: 349 FMASTDKSVNVLGL 390
S D ++ V L
Sbjct: 418 VSGSADSTLKVFEL 431
>AF067216-8|AAN84852.1| 954|Caenorhabditis elegans Hypothetical
protein C35E7.5b protein.
Length = 954
Score = 28.7 bits (61), Expect = 2.6
Identities = 15/57 (26%), Positives = 32/57 (56%)
Frame = +1
Query: 217 IAGSWDCQVRCWEVEGSGNTVPKAVQSMDGPILDVAWHDDGSKVFMASTDKSVNVLG 387
I GS++ V C S +++ ++ S+ I + + D + + ++S D+S+N+LG
Sbjct: 766 ITGSFEEHVGCDHC--SKSSLNHSIPSLQNVITSTSPYTDNAVILVSSKDRSLNILG 820
>AF067216-7|AAC17521.1| 1262|Caenorhabditis elegans Hypothetical
protein C35E7.5a protein.
Length = 1262
Score = 28.7 bits (61), Expect = 2.6
Identities = 15/57 (26%), Positives = 32/57 (56%)
Frame = +1
Query: 217 IAGSWDCQVRCWEVEGSGNTVPKAVQSMDGPILDVAWHDDGSKVFMASTDKSVNVLG 387
I GS++ V C S +++ ++ S+ I + + D + + ++S D+S+N+LG
Sbjct: 766 ITGSFEEHVGCDHC--SKSSLNHSIPSLQNVITSTSPYTDNAVILVSSKDRSLNILG 820
>AC024818-3|AAF60780.2| 453|Caenorhabditis elegans Hypothetical
protein Y54H5A.1 protein.
Length = 453
Score = 28.3 bits (60), Expect = 3.4
Identities = 14/53 (26%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +1
Query: 205 QTFLIAGSWDCQVRCWEVEGSGNTVPKAV-QSMDGPILDVAWHDDGSKVFMAS 360
+ +++G D +++ W ++ P A+ + + PI V WH + FMAS
Sbjct: 334 ENLIVSGGDDGELKIWSLKTIQFGQPVALFKYHNSPITSVDWHPHETTTFMAS 386
>Z81116-13|CAB03300.1| 245|Caenorhabditis elegans Hypothetical
protein T06C12.14 protein.
Length = 245
Score = 27.9 bits (59), Expect = 4.6
Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = +2
Query: 404 QTCTRCASATIAPVKTC-HWIKASNYTC 484
+TC+RCASAT TC +I S+ C
Sbjct: 188 RTCSRCASATTTRSSTCTSFISDSSTAC 215
>Z81113-5|CAB03282.3| 404|Caenorhabditis elegans Hypothetical
protein T03F6.5 protein.
Length = 404
Score = 27.9 bits (59), Expect = 4.6
Identities = 21/74 (28%), Positives = 34/74 (45%)
Frame = +1
Query: 160 DDTVSALEFSPASIPQTFLIAGSWDCQVRCWEVEGSGNTVPKAVQSMDGPILDVAWHDDG 339
++ V L F P +LI+ + D +R WE+ S KA+++ + + VA+H
Sbjct: 332 ENWVRGLAFHPKG---KYLISVADDKTLRVWEL--SAQRCMKAIEAHEHFVSTVAFHQTS 386
Query: 340 SKVFMASTDKSVNV 381
V S D S V
Sbjct: 387 PFVITGSVDMSCKV 400
>Z74030-18|CAA98448.1| 494|Caenorhabditis elegans Hypothetical
protein D1054.15 protein.
Length = 494
Score = 27.9 bits (59), Expect = 4.6
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +1
Query: 166 TVSALEFSPASIPQTFLIAGSWDCQVRCWEVE 261
+V A++ SP FL +G D QV+CW++E
Sbjct: 228 SVRAVKVSPR---HPFLFSGGEDKQVKCWDLE 256
>Z73970-6|CAA98247.1| 494|Caenorhabditis elegans Hypothetical
protein D1054.15 protein.
Length = 494
Score = 27.9 bits (59), Expect = 4.6
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +1
Query: 166 TVSALEFSPASIPQTFLIAGSWDCQVRCWEVE 261
+V A++ SP FL +G D QV+CW++E
Sbjct: 228 SVRAVKVSPR---HPFLFSGGEDKQVKCWDLE 256
>Z37139-8|CAA85487.1| 376|Caenorhabditis elegans Hypothetical
protein C14B1.4 protein.
Length = 376
Score = 27.9 bits (59), Expect = 4.6
Identities = 18/72 (25%), Positives = 33/72 (45%)
Frame = +1
Query: 166 TVSALEFSPASIPQTFLIAGSWDCQVRCWEVEGSGNTVPKAVQSMDGPILDVAWHDDGSK 345
++S+ +FSP +L S D V+ W ++ + + + D+AW D
Sbjct: 89 SISSAKFSPCG---KYLGTSSADKTVKIWNMDHM--ICERTLTGHKLGVNDIAWSSDSRC 143
Query: 346 VFMASTDKSVNV 381
V AS DK++ +
Sbjct: 144 VVSASDDKTLKI 155
>U88170-9|AAB42243.2| 348|Caenorhabditis elegans Serpentine
receptor, class h protein51 protein.
Length = 348
Score = 27.9 bits (59), Expect = 4.6
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = -3
Query: 417 LVHVWVCMAKSQHVDTFICRSHE 349
++H ++C+ KSQ VDTF R+ +
Sbjct: 232 IIHSFLCLRKSQVVDTFSVRTKQ 254
>U49954-1|AAA93426.1| 388|Caenorhabditis elegans Hypothetical
protein Y102E9.2 protein.
Length = 388
Score = 27.9 bits (59), Expect = 4.6
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +1
Query: 310 ILDVAWHDDGSKVFMASTDKSVNVL 384
ILDVA+ DG ++ MA D+ V L
Sbjct: 158 ILDVAFSPDGKRLLMADRDEKVRAL 182
>AF164430-1|AAF82632.1| 404|Caenorhabditis elegans LIS-1 protein.
Length = 404
Score = 27.9 bits (59), Expect = 4.6
Identities = 21/74 (28%), Positives = 34/74 (45%)
Frame = +1
Query: 160 DDTVSALEFSPASIPQTFLIAGSWDCQVRCWEVEGSGNTVPKAVQSMDGPILDVAWHDDG 339
++ V L F P +LI+ + D +R WE+ S KA+++ + + VA+H
Sbjct: 332 ENWVRGLAFHPKG---KYLISVADDKTLRVWEL--SAQRCMKAIEAHEHFVSTVAFHQTS 386
Query: 340 SKVFMASTDKSVNV 381
V S D S V
Sbjct: 387 PFVITGSVDMSCKV 400
>AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical
protein F21E9.1 protein.
Length = 1170
Score = 27.9 bits (59), Expect = 4.6
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +1
Query: 421 C*RHDCACQDMPLDKGFKLHLSHDSF 498
C RH+C PL GF+ L D+F
Sbjct: 175 CYRHECKADCRPLKIGFQSELDRDTF 200
>Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical
protein ZK617.1c protein.
Length = 6629
Score = 27.5 bits (58), Expect = 6.0
Identities = 18/75 (24%), Positives = 31/75 (41%), Gaps = 1/75 (1%)
Frame = -1
Query: 332 SCQATSNMGPSILCTALGTVFPDPSTSQHRT*QSQLP-AIRNVWGIDAGENSKAETVSSG 156
+C+A P+ G P+ S + I+ VW IDAGE + + G
Sbjct: 5024 TCEAVGRPEPTARWLRNGRELPESSRYRFEASDGVYKFTIKEVWDIDAGEYTVEVSNPYG 5083
Query: 155 GELTSRSLLGLFPPL 111
+ + +L+ PP+
Sbjct: 5084 SDTATANLVVQAPPV 5098
>Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical
protein ZK617.1b protein.
Length = 7158
Score = 27.5 bits (58), Expect = 6.0
Identities = 18/75 (24%), Positives = 31/75 (41%), Gaps = 1/75 (1%)
Frame = -1
Query: 332 SCQATSNMGPSILCTALGTVFPDPSTSQHRT*QSQLP-AIRNVWGIDAGENSKAETVSSG 156
+C+A P+ G P+ S + I+ VW IDAGE + + G
Sbjct: 5553 TCEAVGRPEPTARWLRNGRELPESSRYRFEASDGVYKFTIKEVWDIDAGEYTVEVSNPYG 5612
Query: 155 GELTSRSLLGLFPPL 111
+ + +L+ PP+
Sbjct: 5613 SDTATANLVVQAPPV 5627
>Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical
protein ZK617.1a protein.
Length = 6839
Score = 27.5 bits (58), Expect = 6.0
Identities = 18/75 (24%), Positives = 31/75 (41%), Gaps = 1/75 (1%)
Frame = -1
Query: 332 SCQATSNMGPSILCTALGTVFPDPSTSQHRT*QSQLP-AIRNVWGIDAGENSKAETVSSG 156
+C+A P+ G P+ S + I+ VW IDAGE + + G
Sbjct: 5234 TCEAVGRPEPTARWLRNGRELPESSRYRFEASDGVYKFTIKEVWDIDAGEYTVEVSNPYG 5293
Query: 155 GELTSRSLLGLFPPL 111
+ + +L+ PP+
Sbjct: 5294 SDTATANLVVQAPPV 5308
>Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical protein
ZK617.1c protein.
Length = 6629
Score = 27.5 bits (58), Expect = 6.0
Identities = 18/75 (24%), Positives = 31/75 (41%), Gaps = 1/75 (1%)
Frame = -1
Query: 332 SCQATSNMGPSILCTALGTVFPDPSTSQHRT*QSQLP-AIRNVWGIDAGENSKAETVSSG 156
+C+A P+ G P+ S + I+ VW IDAGE + + G
Sbjct: 5024 TCEAVGRPEPTARWLRNGRELPESSRYRFEASDGVYKFTIKEVWDIDAGEYTVEVSNPYG 5083
Query: 155 GELTSRSLLGLFPPL 111
+ + +L+ PP+
Sbjct: 5084 SDTATANLVVQAPPV 5098
>Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical protein
ZK617.1b protein.
Length = 7158
Score = 27.5 bits (58), Expect = 6.0
Identities = 18/75 (24%), Positives = 31/75 (41%), Gaps = 1/75 (1%)
Frame = -1
Query: 332 SCQATSNMGPSILCTALGTVFPDPSTSQHRT*QSQLP-AIRNVWGIDAGENSKAETVSSG 156
+C+A P+ G P+ S + I+ VW IDAGE + + G
Sbjct: 5553 TCEAVGRPEPTARWLRNGRELPESSRYRFEASDGVYKFTIKEVWDIDAGEYTVEVSNPYG 5612
Query: 155 GELTSRSLLGLFPPL 111
+ + +L+ PP+
Sbjct: 5613 SDTATANLVVQAPPV 5627
>Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical protein
ZK617.1a protein.
Length = 6839
Score = 27.5 bits (58), Expect = 6.0
Identities = 18/75 (24%), Positives = 31/75 (41%), Gaps = 1/75 (1%)
Frame = -1
Query: 332 SCQATSNMGPSILCTALGTVFPDPSTSQHRT*QSQLP-AIRNVWGIDAGENSKAETVSSG 156
+C+A P+ G P+ S + I+ VW IDAGE + + G
Sbjct: 5234 TCEAVGRPEPTARWLRNGRELPESSRYRFEASDGVYKFTIKEVWDIDAGEYTVEVSNPYG 5293
Query: 155 GELTSRSLLGLFPPL 111
+ + +L+ PP+
Sbjct: 5294 SDTATANLVVQAPPV 5308
>X15423-1|CAA33463.1| 6048|Caenorhabditis elegans twitchin protein.
Length = 6048
Score = 27.5 bits (58), Expect = 6.0
Identities = 18/75 (24%), Positives = 31/75 (41%), Gaps = 1/75 (1%)
Frame = -1
Query: 332 SCQATSNMGPSILCTALGTVFPDPSTSQHRT*QSQLP-AIRNVWGIDAGENSKAETVSSG 156
+C+A P+ G P+ S + I+ VW IDAGE + + G
Sbjct: 4443 TCEAVGRPEPTARWLRNGRELPESSRYRFEASDGVYKFTIKEVWDIDAGEYTVEVSNPYG 4502
Query: 155 GELTSRSLLGLFPPL 111
+ + +L+ PP+
Sbjct: 4503 SDTATANLVVQAPPV 4517
>U39997-8|AAA81100.1| 718|Caenorhabditis elegans Hypothetical
protein F56D1.2 protein.
Length = 718
Score = 27.5 bits (58), Expect = 6.0
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = -1
Query: 377 LTLLSVEAMN-TLLPSSCQATSNMGPSILCTALGTVFPDPSTSQ 249
LT SV A+N T+LP C+ ++ M + DP+T+Q
Sbjct: 195 LTSFSVYAINATILPQKCRVSTIMTAPYFDDMFPEILVDPTTNQ 238
>AL021487-10|CAA16357.2| 1592|Caenorhabditis elegans Hypothetical
protein Y45F10B.10 protein.
Length = 1592
Score = 27.5 bits (58), Expect = 6.0
Identities = 32/103 (31%), Positives = 44/103 (42%), Gaps = 10/103 (9%)
Frame = +1
Query: 160 DDTVSALEFSPASIPQTFLIAGSWDCQVRCWEVEG-------SGNTVP---KAVQSMDGP 309
D T S + S Q FLI GS D V+ W+V G P A+ S D
Sbjct: 993 DHTGSVVSLQLTSNNQ-FLITGSGDFVVQMWDVTNGKCISRMGGLMAPVSTLAITSNDAF 1051
Query: 310 ILDVAWHDDGSKVFMASTDKSVNVLGLGHADPNVYQVC*RHDC 438
++ VA D+ KVF + ++ L +GH VC + DC
Sbjct: 1052 VV-VACEDETLKVFSTVGGQELHEL-MGHEGKVNSLVCAQDDC 1092
>Z81490-1|CAB04014.1| 510|Caenorhabditis elegans Hypothetical
protein CC4.3 protein.
Length = 510
Score = 27.1 bits (57), Expect = 8.0
Identities = 21/71 (29%), Positives = 37/71 (52%)
Frame = +1
Query: 169 VSALEFSPASIPQTFLIAGSWDCQVRCWEVEGSGNTVPKAVQSMDGPILDVAWHDDGSKV 348
V A+ FS + + +++G D VR ++ SG + K ++ I DV + D+G+ +
Sbjct: 310 VCAVRFSKDN---SHILSGGNDHVVRVHGMK-SGKCL-KEMRGHSSYITDVRYSDEGNHI 364
Query: 349 FMASTDKSVNV 381
STD S+ V
Sbjct: 365 ISCSTDGSIRV 375
>AF330595-1|AAK00353.1| 510|Caenorhabditis elegans SMU-1 protein.
Length = 510
Score = 27.1 bits (57), Expect = 8.0
Identities = 21/71 (29%), Positives = 37/71 (52%)
Frame = +1
Query: 169 VSALEFSPASIPQTFLIAGSWDCQVRCWEVEGSGNTVPKAVQSMDGPILDVAWHDDGSKV 348
V A+ FS + + +++G D VR ++ SG + K ++ I DV + D+G+ +
Sbjct: 310 VCAVRFSKDN---SHILSGGNDHVVRVHGMK-SGKCL-KEMRGHSSYITDVRYSDEGNHI 364
Query: 349 FMASTDKSVNV 381
STD S+ V
Sbjct: 365 ISCSTDGSIRV 375
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,895,903
Number of Sequences: 27780
Number of extensions: 315460
Number of successful extensions: 919
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 861
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 919
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -