Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0014_I12
         (515 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.              25   0.61 
M12598-1|AAA27733.1|   77|Apis mellifera protein ( Bee preprosec...    24   0.81 
AY082691-1|AAL92482.1|   77|Apis mellifera preprosecapin protein.      23   1.9  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    22   4.3  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    21   7.5  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    21   7.5  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          21   10.0 
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      21   10.0 
DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    21   10.0 
DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    21   10.0 

>DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.
          Length = 145

 Score = 24.6 bits (51), Expect = 0.61
 Identities = 13/62 (20%), Positives = 25/62 (40%)
 Frame = +2

Query: 323 PGMMMVVKCSWLLQIKVSTCWDLAMQTQTCTRCASATIAPVKTCHWIKASNYTCLMTASW 502
           P +    + S++    ++T   +    QT T  A+  I  V+   W +     C M   W
Sbjct: 18  PSVHCGTRPSFVSDEMIATAASVVNACQTQTGVATVDIEAVRNGQWPETRQLKCYMYCLW 77

Query: 503 DK 508
           ++
Sbjct: 78  EQ 79


>M12598-1|AAA27733.1|   77|Apis mellifera protein ( Bee
           preprosecapin mRNA, complete cds. ).
          Length = 77

 Score = 24.2 bits (50), Expect = 0.81
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = -1

Query: 380 TLTLLSVEAMNTLLPSSCQATSNMGPSILCTALGTVFPDP 261
           T+ L S   +  ++PS C+A SN   S+   +   V P+P
Sbjct: 13  TVLLFSFVVILLIIPSKCEAVSNDRQSLEARSADLV-PEP 51


>AY082691-1|AAL92482.1|   77|Apis mellifera preprosecapin protein.
          Length = 77

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -1

Query: 380 TLTLLSVEAMNTLLPSSCQATSN 312
           T+ L S   +  ++PS C+A SN
Sbjct: 13  TVLLFSFVVILLIIPSKCEAVSN 35


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -1

Query: 416 WYTFGSAWPSPNTLTL 369
           WY+  S+WP+   L L
Sbjct: 433 WYSLASSWPALVPLAL 448


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 13/46 (28%), Positives = 22/46 (47%)
 Frame = -1

Query: 275 VFPDPSTSQHRT*QSQLPAIRNVWGIDAGENSKAETVSSGGELTSR 138
           + PD  T+  +T   +L  I   +GI     +K E ++ GG +  R
Sbjct: 35  IMPDILTAIGQTPLIKLNNIPKSYGIKCEIYAKCEFLNPGGSVKDR 80


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -2

Query: 448 LDRRNRGASTPGTRLGLH 395
           LD+ N     PG R+G H
Sbjct: 153 LDKLNTQDIVPGVRIGAH 170


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 6/9 (66%), Positives = 6/9 (66%)
 Frame = -1

Query: 419 TWYTFGSAW 393
           TWY  G AW
Sbjct: 56  TWYNEGQAW 64


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 6/9 (66%), Positives = 6/9 (66%)
 Frame = -1

Query: 419 TWYTFGSAW 393
           TWY  G AW
Sbjct: 56  TWYNEGQAW 64


>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = +3

Query: 267 RKHCSQSSTEYGWT 308
           R+ CS     YGWT
Sbjct: 171 RQVCSLRMASYGWT 184


>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = +3

Query: 267 RKHCSQSSTEYGWT 308
           R+ CS     YGWT
Sbjct: 171 RQVCSLRMASYGWT 184


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,150
Number of Sequences: 438
Number of extensions: 3926
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14354847
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)