Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0014_I08
         (426 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-682|AAF45987.2| 1893|Drosophila melanogaster CG2861-PA,...    28   4.5  
AY089501-1|AAL90239.1|  603|Drosophila melanogaster GH11862p pro...    28   6.0  
AE014134-1419|AAF52613.2| 1093|Drosophila melanogaster CG8475-PA...    28   6.0  

>AE014298-682|AAF45987.2| 1893|Drosophila melanogaster CG2861-PA,
            isoform A protein.
          Length = 1893

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 15/42 (35%), Positives = 23/42 (54%)
 Frame = +1

Query: 247  LLMKRKSSNHQIKSSKLPMIVSEVT*PQNFDHEYLSNYTPSR 372
            L   R   N+ +++  LP + S+ T P N+   +L NY PSR
Sbjct: 1690 LCYPRGRLNYPVRN--LPPMNSQGTYPPNYPQNFLPNYPPSR 1729


>AY089501-1|AAL90239.1|  603|Drosophila melanogaster GH11862p
           protein.
          Length = 603

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 13/48 (27%), Positives = 24/48 (50%)
 Frame = -3

Query: 232 NKLSRVCSLACLCYIL*KSRLDFCFFFFSITIMNNYKTLKMHI*KCWK 89
           +K+ R+C +  LCY L     DF  +     ++++ KT    + K W+
Sbjct: 60  SKVYRICGMTVLCYPLIFEVSDFYLYRDMALLIDDIKTELQFVGKYWR 107


>AE014134-1419|AAF52613.2| 1093|Drosophila melanogaster CG8475-PA,
           isoform A protein.
          Length = 1093

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 13/48 (27%), Positives = 24/48 (50%)
 Frame = -3

Query: 232 NKLSRVCSLACLCYIL*KSRLDFCFFFFSITIMNNYKTLKMHI*KCWK 89
           +K+ R+C +  LCY L     DF  +     ++++ KT    + K W+
Sbjct: 550 SKVYRICGMTVLCYPLIFEVSDFYLYRDMALLIDDIKTELQFVGKYWR 597


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,788,869
Number of Sequences: 53049
Number of extensions: 306412
Number of successful extensions: 449
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 444
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 449
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1313584398
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)