Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_I07
(453 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC040173-1|AAH40173.1| 227|Homo sapiens WDR85 protein protein. 32 0.80
U77970-1|AAB47250.1| 824|Homo sapiens neuronal PAS2 protein. 29 7.4
U51625-1|AAC51211.1| 626|Homo sapiens MOP4 protein. 29 7.4
U01062-1|AAC50064.1| 2671|Homo sapiens human type 3 inositol 1,4... 29 7.4
EF015903-1|ABM64214.1| 824|Homo sapiens neuronal PAS domain pro... 29 7.4
D26351-1|BAA05385.1| 2671|Homo sapiens type 3 inositol 1,4,5-tri... 29 7.4
BC146646-1|AAI46647.1| 1049|Homo sapiens ITPR3 protein protein. 29 7.4
BC072383-1|AAH72383.1| 824|Homo sapiens neuronal PAS domain pro... 29 7.4
BC051351-1|AAH51351.2| 824|Homo sapiens neuronal PAS domain pro... 29 7.4
BC028107-1|AAH28107.1| 622|Homo sapiens NPAS2 protein protein. 29 7.4
AL139044-1|CAI16455.1| 2671|Homo sapiens inositol 1,4,5-triphosp... 29 7.4
AC016738-1|AAY14822.1| 813|Homo sapiens unknown protein. 29 7.4
>BC040173-1|AAH40173.1| 227|Homo sapiens WDR85 protein protein.
Length = 227
Score = 32.3 bits (70), Expect = 0.80
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = -1
Query: 279 RRLPPRGVVLPISMTEFRCRLLLVSFAFQKH 187
R +PPRG+V +S+ C L LV F++ +H
Sbjct: 8 RSVPPRGLVEQVSLAFLICLLWLVGFSYDEH 38
>U77970-1|AAB47250.1| 824|Homo sapiens neuronal PAS2 protein.
Length = 824
Score = 29.1 bits (62), Expect = 7.4
Identities = 20/77 (25%), Positives = 34/77 (44%), Gaps = 4/77 (5%)
Frame = +3
Query: 75 LRASFNAFKFPSSDNIRFQCNIRVCFGKCQPVNCRGLDAFGKRKKREAIDNEI----PSS 242
LR S N +FP+ + I+F N R + +C G D R R + E+
Sbjct: 173 LRGSLNPKEFPTYEYIKFVGNFR-SYNNVPSPSCNGFDNTLSRPCRVPLGKEVCFIATVR 231
Query: 243 ISEGQLREEVTVVSNPI 293
++ Q +E+ +V P+
Sbjct: 232 LATPQFLKEMCIVDEPL 248
>U51625-1|AAC51211.1| 626|Homo sapiens MOP4 protein.
Length = 626
Score = 29.1 bits (62), Expect = 7.4
Identities = 20/77 (25%), Positives = 34/77 (44%), Gaps = 4/77 (5%)
Frame = +3
Query: 75 LRASFNAFKFPSSDNIRFQCNIRVCFGKCQPVNCRGLDAFGKRKKREAIDNEI----PSS 242
LR S N +FP+ + I+F N R + +C G D R R + E+
Sbjct: 173 LRGSLNPKEFPTYEYIKFVGNFR-SYNNVPSPSCNGFDNTLSRPCRVPLGKEVCFIATVR 231
Query: 243 ISEGQLREEVTVVSNPI 293
++ Q +E+ +V P+
Sbjct: 232 LATPQFLKEMCIVDEPL 248
>U01062-1|AAC50064.1| 2671|Homo sapiens human type 3 inositol
1,4,5-trisphosphate receptor protein.
Length = 2671
Score = 29.1 bits (62), Expect = 7.4
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +2
Query: 143 CLFRKMPTGELSRFGCFWKAKETRSNRQR 229
CLF+ P S +WKAK+T+ ++++
Sbjct: 55 CLFKVCPMNRYSAQKQYWKAKQTKQDKEK 83
>EF015903-1|ABM64214.1| 824|Homo sapiens neuronal PAS domain
protein 2 protein.
Length = 824
Score = 29.1 bits (62), Expect = 7.4
Identities = 20/77 (25%), Positives = 34/77 (44%), Gaps = 4/77 (5%)
Frame = +3
Query: 75 LRASFNAFKFPSSDNIRFQCNIRVCFGKCQPVNCRGLDAFGKRKKREAIDNEI----PSS 242
LR S N +FP+ + I+F N R + +C G D R R + E+
Sbjct: 173 LRGSLNPKEFPTYEYIKFVGNFR-SYNNVPSPSCNGFDNTLSRPCRVPLGKEVCFIATVR 231
Query: 243 ISEGQLREEVTVVSNPI 293
++ Q +E+ +V P+
Sbjct: 232 LATPQFLKEMCIVDEPL 248
>D26351-1|BAA05385.1| 2671|Homo sapiens type 3 inositol
1,4,5-trisphosphate receptor protein.
Length = 2671
Score = 29.1 bits (62), Expect = 7.4
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +2
Query: 143 CLFRKMPTGELSRFGCFWKAKETRSNRQR 229
CLF+ P S +WKAK+T+ ++++
Sbjct: 55 CLFKVCPMNRYSAQKQYWKAKQTKQDKEK 83
>BC146646-1|AAI46647.1| 1049|Homo sapiens ITPR3 protein protein.
Length = 1049
Score = 29.1 bits (62), Expect = 7.4
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +2
Query: 143 CLFRKMPTGELSRFGCFWKAKETRSNRQR 229
CLF+ P S +WKAK+T+ ++++
Sbjct: 55 CLFKVCPMNRYSAQKQYWKAKQTKQDKEK 83
>BC072383-1|AAH72383.1| 824|Homo sapiens neuronal PAS domain
protein 2 protein.
Length = 824
Score = 29.1 bits (62), Expect = 7.4
Identities = 20/77 (25%), Positives = 34/77 (44%), Gaps = 4/77 (5%)
Frame = +3
Query: 75 LRASFNAFKFPSSDNIRFQCNIRVCFGKCQPVNCRGLDAFGKRKKREAIDNEI----PSS 242
LR S N +FP+ + I+F N R + +C G D R R + E+
Sbjct: 173 LRGSLNPKEFPTYEYIKFVGNFR-SYNNVPSPSCNGFDNTLSRPCRVPLGKEVCFIATVR 231
Query: 243 ISEGQLREEVTVVSNPI 293
++ Q +E+ +V P+
Sbjct: 232 LATPQFLKEMCIVDEPL 248
>BC051351-1|AAH51351.2| 824|Homo sapiens neuronal PAS domain
protein 2 protein.
Length = 824
Score = 29.1 bits (62), Expect = 7.4
Identities = 20/77 (25%), Positives = 34/77 (44%), Gaps = 4/77 (5%)
Frame = +3
Query: 75 LRASFNAFKFPSSDNIRFQCNIRVCFGKCQPVNCRGLDAFGKRKKREAIDNEI----PSS 242
LR S N +FP+ + I+F N R + +C G D R R + E+
Sbjct: 173 LRGSLNPKEFPTYEYIKFVGNFR-SYNNVPSPSCNGFDNTLSRPCRVPLGKEVCFIATVR 231
Query: 243 ISEGQLREEVTVVSNPI 293
++ Q +E+ +V P+
Sbjct: 232 LATPQFLKEMCIVDEPL 248
>BC028107-1|AAH28107.1| 622|Homo sapiens NPAS2 protein protein.
Length = 622
Score = 29.1 bits (62), Expect = 7.4
Identities = 20/77 (25%), Positives = 34/77 (44%), Gaps = 4/77 (5%)
Frame = +3
Query: 75 LRASFNAFKFPSSDNIRFQCNIRVCFGKCQPVNCRGLDAFGKRKKREAIDNEI----PSS 242
LR S N +FP+ + I+F N R + +C G D R R + E+
Sbjct: 173 LRGSLNPKEFPTYEYIKFVGNFR-SYNNVPSPSCNGFDNTLSRPCRVPLGKEVCFIATVR 231
Query: 243 ISEGQLREEVTVVSNPI 293
++ Q +E+ +V P+
Sbjct: 232 LATPQFLKEMCIVDEPL 248
>AL139044-1|CAI16455.1| 2671|Homo sapiens inositol
1,4,5-triphosphate receptor, type 3 protein.
Length = 2671
Score = 29.1 bits (62), Expect = 7.4
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +2
Query: 143 CLFRKMPTGELSRFGCFWKAKETRSNRQR 229
CLF+ P S +WKAK+T+ ++++
Sbjct: 55 CLFKVCPMNRYSAQKQYWKAKQTKQDKEK 83
>AC016738-1|AAY14822.1| 813|Homo sapiens unknown protein.
Length = 813
Score = 29.1 bits (62), Expect = 7.4
Identities = 20/77 (25%), Positives = 34/77 (44%), Gaps = 4/77 (5%)
Frame = +3
Query: 75 LRASFNAFKFPSSDNIRFQCNIRVCFGKCQPVNCRGLDAFGKRKKREAIDNEI----PSS 242
LR S N +FP+ + I+F N R + +C G D R R + E+
Sbjct: 162 LRGSLNPKEFPTYEYIKFVGNFR-SYNNVPSPSCNGFDNTLSRPCRVPLGKEVCFIATVR 220
Query: 243 ISEGQLREEVTVVSNPI 293
++ Q +E+ +V P+
Sbjct: 221 LATPQFLKEMCIVDEPL 237
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,354,991
Number of Sequences: 237096
Number of extensions: 1143070
Number of successful extensions: 3458
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 3154
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3449
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3758237868
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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