Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_I07
(453 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z71267-6|CAA95850.3| 374|Caenorhabditis elegans Hypothetical pr... 45 3e-05
U97407-3|AAM15558.1| 1069|Caenorhabditis elegans Nompa homolog (... 45 3e-05
U97407-2|AAB52479.2| 1065|Caenorhabditis elegans Nompa homolog (... 45 3e-05
Z99278-7|CAB16488.1| 382|Caenorhabditis elegans Hypothetical pr... 40 6e-04
U23449-1|AAC24298.3| 488|Caenorhabditis elegans Hypothetical pr... 39 0.002
AC084196-7|AAK29949.2| 284|Caenorhabditis elegans Hypothetical ... 38 0.003
Z49911-1|CAA90131.2| 647|Caenorhabditis elegans Hypothetical pr... 36 0.010
Z66565-4|CAA91480.1| 384|Caenorhabditis elegans Hypothetical pr... 36 0.014
Z49071-5|CAA88879.1| 609|Caenorhabditis elegans Hypothetical pr... 36 0.018
Z68342-3|CAA92773.1| 751|Caenorhabditis elegans Hypothetical pr... 35 0.024
Z82268-4|CAB05199.1| 741|Caenorhabditis elegans Hypothetical pr... 35 0.032
AL132851-1|CAB60411.1| 403|Caenorhabditis elegans Hypothetical ... 35 0.032
AF016429-1|AAB65365.2| 518|Caenorhabditis elegans Hypothetical ... 35 0.032
AC024831-2|AAN63422.1| 502|Caenorhabditis elegans Hypothetical ... 35 0.032
AC024831-1|AAN63421.1| 500|Caenorhabditis elegans Hypothetical ... 35 0.032
Z74041-9|CAA98523.2| 801|Caenorhabditis elegans Hypothetical pr... 34 0.056
Z74035-5|CAA98485.2| 801|Caenorhabditis elegans Hypothetical pr... 34 0.056
AF106584-1|AAC78221.1| 360|Caenorhabditis elegans Hypothetical ... 34 0.056
Z68120-1|CAA92199.3| 711|Caenorhabditis elegans Hypothetical pr... 33 0.097
AF218866-1|AAF67103.1| 711|Caenorhabditis elegans transmembrane... 33 0.097
Z78542-9|CAB01742.2| 405|Caenorhabditis elegans Hypothetical pr... 31 0.30
Z72504-5|CAA96602.2| 812|Caenorhabditis elegans Hypothetical pr... 31 0.30
Z72504-4|CAH60755.1| 653|Caenorhabditis elegans Hypothetical pr... 31 0.30
X91045-1|CAA62505.1| 693|Caenorhabditis elegans let-653 protein. 31 0.30
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 31 0.52
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 31 0.52
Z81086-6|CAB03116.1| 610|Caenorhabditis elegans Hypothetical pr... 31 0.52
AF099921-1|AAC68807.1| 1286|Caenorhabditis elegans Hypothetical ... 30 0.69
AF067608-2|AAC17653.1| 225|Caenorhabditis elegans Hypothetical ... 30 0.69
Z81583-7|CAB04668.1| 268|Caenorhabditis elegans Hypothetical pr... 30 0.91
Z73428-2|CAA97806.2| 572|Caenorhabditis elegans Hypothetical pr... 29 1.2
Z82073-7|CAB04922.2| 327|Caenorhabditis elegans Hypothetical pr... 29 2.1
AC024791-10|ABM74563.1| 1736|Caenorhabditis elegans Hypothetical... 29 2.1
Z81143-9|CAB03520.1| 440|Caenorhabditis elegans Hypothetical pr... 28 3.7
Z81130-4|CAB03414.2| 512|Caenorhabditis elegans Hypothetical pr... 28 3.7
Z75713-10|CAB00057.1| 440|Caenorhabditis elegans Hypothetical p... 28 3.7
Z68318-4|CAA92693.2| 1170|Caenorhabditis elegans Hypothetical pr... 28 3.7
U39853-1|AAK39227.2| 390|Caenorhabditis elegans Hypothetical pr... 28 3.7
AL032627-8|CAB63354.2| 373|Caenorhabditis elegans Hypothetical ... 28 3.7
AF047656-13|AAC05105.1| 313|Caenorhabditis elegans Collagen pro... 28 3.7
AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen prot... 28 3.7
U00049-7|AAC47054.1| 582|Caenorhabditis elegans Hypothetical pr... 27 4.8
AL110485-7|CAB60355.1| 237|Caenorhabditis elegans Hypothetical ... 27 4.8
Z49207-9|CAA89068.2| 379|Caenorhabditis elegans Hypothetical pr... 27 6.4
AC091267-1|AAK31565.1| 789|Caenorhabditis elegans Hypothetical ... 27 6.4
Z35639-5|CAA84699.2| 534|Caenorhabditis elegans Hypothetical pr... 27 8.4
>Z71267-6|CAA95850.3| 374|Caenorhabditis elegans Hypothetical
protein W01A8.3 protein.
Length = 374
Score = 44.8 bits (101), Expect = 3e-05
Identities = 38/96 (39%), Positives = 45/96 (46%), Gaps = 16/96 (16%)
Frame = +3
Query: 12 DGCATDTAIFGEWERSEDGSALR--ASFNAFKFPSSDNIRFQCNIRVC---FGKCQ---P 167
DGCATD + E S D S +R AS FK+ S+ + F C IR+C G CQ P
Sbjct: 217 DGCATDPFLLS--ELSYDASLMRAHASSQVFKYADSNQLYFTCQIRLCQKQMGMCQEVTP 274
Query: 168 VNC------RGLDAFGKRKKREA--IDNEIPSSISE 251
NC G R KREA D EI + SE
Sbjct: 275 PNCGVKKLLSEASGDGNRTKREADRSDYEIDVATSE 310
>U97407-3|AAM15558.1| 1069|Caenorhabditis elegans Nompa homolog
(drosophila nompa:no mechanoreceptor potential a) protein
1, isoform b protein.
Length = 1069
Score = 44.8 bits (101), Expect = 3e-05
Identities = 23/57 (40%), Positives = 33/57 (57%), Gaps = 4/57 (7%)
Frame = +3
Query: 69 SALRAS-FNAFKFPSSDNIRFQCNIRVCFGKCQPVNCR---GLDAFGKRKKREAIDN 227
SA++ + AF+F SS +IR C + +C G C+PV C G+ RKKRE +N
Sbjct: 914 SAVKTTKMQAFRFDSSASIRVTCEVEICKGDCEPVECALTGGVKKSFGRKKREVSNN 970
>U97407-2|AAB52479.2| 1065|Caenorhabditis elegans Nompa homolog
(drosophila nompa:no mechanoreceptor potential a) protein
1, isoform a protein.
Length = 1065
Score = 44.8 bits (101), Expect = 3e-05
Identities = 23/57 (40%), Positives = 33/57 (57%), Gaps = 4/57 (7%)
Frame = +3
Query: 69 SALRAS-FNAFKFPSSDNIRFQCNIRVCFGKCQPVNCR---GLDAFGKRKKREAIDN 227
SA++ + AF+F SS +IR C + +C G C+PV C G+ RKKRE +N
Sbjct: 910 SAVKTTKMQAFRFDSSASIRVTCEVEICKGDCEPVECALTGGVKKSFGRKKREVSNN 966
>Z99278-7|CAB16488.1| 382|Caenorhabditis elegans Hypothetical
protein Y53C12B.6 protein.
Length = 382
Score = 40.3 bits (90), Expect = 6e-04
Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 6/78 (7%)
Frame = +3
Query: 12 DGCATDTAIFGEWERSEDGSALRASFNAFKFPSSDNIRFQCNIRVCF----GKCQPVNC- 176
+GC TD + + E AS +AFKF + + F+CNIR+ G+C NC
Sbjct: 225 NGCTTDGELLSPIKYKEGSMRAAASSHAFKFVDNHIVYFKCNIRITVKNPSGECPVNNCS 284
Query: 177 -RGLDAFGKRKKREAIDN 227
G RK R+ ++
Sbjct: 285 PNGSTGLISRKARDVFEH 302
>U23449-1|AAC24298.3| 488|Caenorhabditis elegans Hypothetical
protein K06A1.3 protein.
Length = 488
Score = 38.7 bits (86), Expect = 0.002
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Frame = +3
Query: 12 DGCATDTAIFGEWERSEDGSALRASFNAFKFPSSDNIRFQCNIRVC---FGKCQPVNC 176
+GC+ D I +E+ + + NAF FP +N+R C I VC G C C
Sbjct: 208 NGCSEDIYIMPNLIYNENRTKAFVNSNAFNFPDQNNVRISCKISVCPTLSGTCHQPKC 265
>AC084196-7|AAK29949.2| 284|Caenorhabditis elegans Hypothetical
protein Y55D5A.6 protein.
Length = 284
Score = 37.9 bits (84), Expect = 0.003
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +3
Query: 12 DGCATDTAIFGEWERSEDGSALRASFNAFKFPSSDNIRFQCNIRVCFGKCQ 164
+GC+ D + + S+D S + A+ AFKFP + +C +R C K +
Sbjct: 128 NGCSLDEELISDTTYSQDFSKIYATSLAFKFPEEYEVFIRCAVRTCVKKTE 178
>Z49911-1|CAA90131.2| 647|Caenorhabditis elegans Hypothetical
protein M28.1 protein.
Length = 647
Score = 36.3 bits (80), Expect = 0.010
Identities = 22/74 (29%), Positives = 31/74 (41%), Gaps = 6/74 (8%)
Frame = +3
Query: 15 GCATDTAIFGEWERSEDGSALRASFNAFKFPSSDNIRFQCNIRVCF---GKC---QPVNC 176
GC D + SEDG + + FKFP + F+C I C +C P C
Sbjct: 398 GCTLDQLMLQTPTYSEDGMSAQVDAYIFKFPDRSTVDFRCTITFCSVDDAECLDMTPPKC 457
Query: 177 RGLDAFGKRKKREA 218
+ +RKKR +
Sbjct: 458 GANNNLLRRKKRSS 471
>Z66565-4|CAA91480.1| 384|Caenorhabditis elegans Hypothetical
protein T04F8.4 protein.
Length = 384
Score = 35.9 bits (79), Expect = 0.014
Identities = 27/72 (37%), Positives = 32/72 (44%), Gaps = 7/72 (9%)
Frame = +3
Query: 15 GCATDTAIFGEWERSED-GSALRASFNAFKFPSSDNIRFQCNIRVCF---GKCQ---PVN 173
GC TD + G+ E A R SF FKF +RFQC IR+C G C P
Sbjct: 221 GCHTDRLLLGDPTYVEALNMAYRESF-VFKFADRIAVRFQCEIRLCLKDDGGCDGITPPM 279
Query: 174 CRGLDAFGKRKK 209
C DA K+
Sbjct: 280 CSFKDANSNEKQ 291
>Z49071-5|CAA88879.1| 609|Caenorhabditis elegans Hypothetical
protein T22C8.7 protein.
Length = 609
Score = 35.5 bits (78), Expect = 0.018
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +3
Query: 15 GCATDTAIFGEWERSEDGSALRASFNAFKFPSSDNIRFQCNIRVCFGKCQPVNCRGL 185
GC TD ++F E S+D + + AF++ + F C I C + Q C G+
Sbjct: 219 GCVTDFSLFPEVSYSDDLKSAFTAVRAFRYADQVMVHFSCQITTC--QKQENGCEGI 273
>Z68342-3|CAA92773.1| 751|Caenorhabditis elegans Hypothetical
protein F38E11.4 protein.
Length = 751
Score = 35.1 bits (77), Expect = 0.024
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +3
Query: 60 EDGSALRASFNAFKFPSSDNIRFQCNIRVCFGKCQPVN 173
++G F+F S +R +C+I VC KC PV+
Sbjct: 712 KNGEVYSTKMKVFRFDGSRRVRIKCSIDVCVEKCPPVS 749
>Z82268-4|CAB05199.1| 741|Caenorhabditis elegans Hypothetical
protein F52B11.3 protein.
Length = 741
Score = 34.7 bits (76), Expect = 0.032
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = +3
Query: 12 DGCATDTAIFGEWERSEDGSALRASFNAFKFPSSDNIRFQCNIRVCFGK--CQPVNC 176
+GC A+ G E+ D + L++ AF+ S +++ C+I C G C NC
Sbjct: 578 NGCPRYPALVGPVEQDFDKNRLKSDLRAFRLDGSYDVQIVCSIMFCAGPNGCPVSNC 634
>AL132851-1|CAB60411.1| 403|Caenorhabditis elegans Hypothetical
protein Y53H1B.1 protein.
Length = 403
Score = 34.7 bits (76), Expect = 0.032
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = +3
Query: 15 GCATDTAIFGEWERSEDGSALRASFNAFKFPSSDNIRFQCNIRVC 149
GCA D I + ++D + A N FKF + FQC + C
Sbjct: 218 GCAIDPLILPDLTYNKDNNVAYAQVNTFKFADKVSTYFQCAVSTC 262
>AF016429-1|AAB65365.2| 518|Caenorhabditis elegans Hypothetical
protein T21H3.4 protein.
Length = 518
Score = 34.7 bits (76), Expect = 0.032
Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 6/74 (8%)
Frame = +3
Query: 12 DGCATDTAIFGEWERSEDGSALRASFNAFKFPSSDNIRFQCNIRVCFG---KCQ---PVN 173
+GC+ D I E + + AF+F +S+++ F+C I VC C+ P
Sbjct: 330 NGCSLDEEIIPTPEYDIENGVIYTPSKAFRFANSNHVHFKCMISVCSAVDPSCRNSVPPK 389
Query: 174 CRGLDAFGKRKKRE 215
C+ + K+K+R+
Sbjct: 390 CK--NGLAKKKRRQ 401
>AC024831-2|AAN63422.1| 502|Caenorhabditis elegans Hypothetical
protein Y55F3C.7b protein.
Length = 502
Score = 34.7 bits (76), Expect = 0.032
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = +3
Query: 15 GCATDTAIFGEWERSEDGSALRASFNAFKFPSSDNIRFQCNIRVCFGKCQPVNC 176
GCA +I G + R E + F+FP++ ++ C + C G C+ C
Sbjct: 199 GCALFKSIMGHFARRESVEEAEIP-SMFRFPNAKQLKISCIVTECDGSCEARTC 251
>AC024831-1|AAN63421.1| 500|Caenorhabditis elegans Hypothetical
protein Y55F3C.7a protein.
Length = 500
Score = 34.7 bits (76), Expect = 0.032
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = +3
Query: 15 GCATDTAIFGEWERSEDGSALRASFNAFKFPSSDNIRFQCNIRVCFGKCQPVNC 176
GCA +I G + R E + F+FP++ ++ C + C G C+ C
Sbjct: 199 GCALFKSIMGHFARRESVEEAEIP-SMFRFPNAKQLKISCIVTECDGSCEARTC 251
>Z74041-9|CAA98523.2| 801|Caenorhabditis elegans Hypothetical
protein F47G9.3 protein.
Length = 801
Score = 33.9 bits (74), Expect = 0.056
Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Frame = +3
Query: 12 DGCATDTA---IFGEWERSEDGSALRASFNAFKFPSSDNIRFQCNIRVCFGKCQPVNC 176
+GCAT A + + E E + F AF+F + ++ +C ++ C KC+ NC
Sbjct: 661 NGCATQHAKEYVLRD-EIKETATGFVLPFRAFRFKQGEAVKIECEVKYC-EKCKKANC 716
>Z74035-5|CAA98485.2| 801|Caenorhabditis elegans Hypothetical
protein F47G9.3 protein.
Length = 801
Score = 33.9 bits (74), Expect = 0.056
Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Frame = +3
Query: 12 DGCATDTA---IFGEWERSEDGSALRASFNAFKFPSSDNIRFQCNIRVCFGKCQPVNC 176
+GCAT A + + E E + F AF+F + ++ +C ++ C KC+ NC
Sbjct: 661 NGCATQHAKEYVLRD-EIKETATGFVLPFRAFRFKQGEAVKIECEVKYC-EKCKKANC 716
>AF106584-1|AAC78221.1| 360|Caenorhabditis elegans Hypothetical
protein F54A5.2 protein.
Length = 360
Score = 33.9 bits (74), Expect = 0.056
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
Frame = +3
Query: 15 GCATDTA--IFGEWE--RSEDGSALRASFNAFKFPSSDNIRFQCNIRVCFGKCQPVNCRG 182
GC+ T+ ++G++E R + A+ FP+S+ + CN+ VC C CRG
Sbjct: 212 GCSLQTSGEVWGDFEVTRRNGKTIFYNHIKAWAFPTSNEVNIFCNLHVCV-TCTQAACRG 270
>Z68120-1|CAA92199.3| 711|Caenorhabditis elegans Hypothetical
protein T24C2.1 protein.
Length = 711
Score = 33.1 bits (72), Expect = 0.097
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = +3
Query: 12 DGCATDTAIFGEWERSEDGSALRASFNAFKFPSSDNIRFQCNIRVC 149
+GC D+ + G+ S+ L A FKF + D R +C + C
Sbjct: 202 NGCVIDSELMGDIVYSDHVPKLYARARIFKFLTDDKYRIECTLEFC 247
>AF218866-1|AAF67103.1| 711|Caenorhabditis elegans transmembrane
protein RAM-5 protein.
Length = 711
Score = 33.1 bits (72), Expect = 0.097
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = +3
Query: 12 DGCATDTAIFGEWERSEDGSALRASFNAFKFPSSDNIRFQCNIRVC 149
+GC D+ + G+ S+ L A FKF + D R +C + C
Sbjct: 202 NGCVIDSELMGDIVYSDHVPKLYARARIFKFLTDDKYRIECTLEFC 247
>Z78542-9|CAB01742.2| 405|Caenorhabditis elegans Hypothetical
protein F20D1.8 protein.
Length = 405
Score = 31.5 bits (68), Expect = 0.30
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +3
Query: 12 DGCATDTAIFGEWERSEDGSALRASFNAFKFPSSDNIRFQCNIRV 146
+GCA D + E S D + + S FKF ++ FQC IR+
Sbjct: 252 NGCAVDKYLINNLEYSSDLTGGQLS-QVFKFADQPSVFFQCKIRL 295
>Z72504-5|CAA96602.2| 812|Caenorhabditis elegans Hypothetical
protein C29E6.1a protein.
Length = 812
Score = 31.5 bits (68), Expect = 0.30
Identities = 22/84 (26%), Positives = 40/84 (47%), Gaps = 6/84 (7%)
Frame = +3
Query: 12 DGCATD-TAIFGEWERSEDGSALRASFNAFKFPSSDNIRFQCNIRVC-FGKCQPVNC--- 176
DGC D + SE G+ + S AF++ ++ +++ C +R+C F C C
Sbjct: 664 DGCPADGVGLVCPPTHSEFGA--KVSVEAFRYQTTGQVQYSCLVRICPFAPCPKNTCDDV 721
Query: 177 RGLD-AFGKRKKREAIDNEIPSSI 245
G D ++ R +RE +I ++
Sbjct: 722 EGCDSSYMHRYRRELSLEDIKKAL 745
>Z72504-4|CAH60755.1| 653|Caenorhabditis elegans Hypothetical
protein C29E6.1b protein.
Length = 653
Score = 31.5 bits (68), Expect = 0.30
Identities = 22/84 (26%), Positives = 40/84 (47%), Gaps = 6/84 (7%)
Frame = +3
Query: 12 DGCATD-TAIFGEWERSEDGSALRASFNAFKFPSSDNIRFQCNIRVC-FGKCQPVNC--- 176
DGC D + SE G+ + S AF++ ++ +++ C +R+C F C C
Sbjct: 505 DGCPADGVGLVCPPTHSEFGA--KVSVEAFRYQTTGQVQYSCLVRICPFAPCPKNTCDDV 562
Query: 177 RGLD-AFGKRKKREAIDNEIPSSI 245
G D ++ R +RE +I ++
Sbjct: 563 EGCDSSYMHRYRRELSLEDIKKAL 586
>X91045-1|CAA62505.1| 693|Caenorhabditis elegans let-653 protein.
Length = 693
Score = 31.5 bits (68), Expect = 0.30
Identities = 22/84 (26%), Positives = 40/84 (47%), Gaps = 6/84 (7%)
Frame = +3
Query: 12 DGCATD-TAIFGEWERSEDGSALRASFNAFKFPSSDNIRFQCNIRVC-FGKCQPVNC--- 176
DGC D + SE G+ + S AF++ ++ +++ C +R+C F C C
Sbjct: 545 DGCPADGVGLVCPPTHSEFGA--KVSVEAFRYQTTGQVQYSCLVRICPFAPCPKNTCDDV 602
Query: 177 RGLD-AFGKRKKREAIDNEIPSSI 245
G D ++ R +RE +I ++
Sbjct: 603 EGCDSSYMHRYRRELSLEDIKKAL 626
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 30.7 bits (66), Expect = 0.52
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +2
Query: 182 FGCFWKAKETRSNRQRNSVIDIGRTTPRGGNRRI 283
F W ET R+R +DIGRT+ +RRI
Sbjct: 217 FAYAWVLDETEEERERGVTMDIGRTSFETSHRRI 250
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 30.7 bits (66), Expect = 0.52
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +2
Query: 182 FGCFWKAKETRSNRQRNSVIDIGRTTPRGGNRRI 283
F W ET R+R +DIGRT+ +RRI
Sbjct: 235 FAYAWVLDETEEERERGVTMDIGRTSFETSHRRI 268
>Z81086-6|CAB03116.1| 610|Caenorhabditis elegans Hypothetical
protein F53B6.6 protein.
Length = 610
Score = 30.7 bits (66), Expect = 0.52
Identities = 15/62 (24%), Positives = 28/62 (45%), Gaps = 6/62 (9%)
Frame = +3
Query: 15 GCATDTAIFGEWERSEDGSALRASFNAFKFPSSDNIRFQCNIRVCF---GKCQ---PVNC 176
GC+TD + + E + + + FK+ + F C +++C+ G C+ P C
Sbjct: 268 GCSTDPFLLPQIEYEHGAISAYTNAHVFKYADKVQLYFTCTVQLCYKHDGGCEGITPPQC 327
Query: 177 RG 182
G
Sbjct: 328 SG 329
>AF099921-1|AAC68807.1| 1286|Caenorhabditis elegans Hypothetical
protein M01E10.2 protein.
Length = 1286
Score = 30.3 bits (65), Expect = 0.69
Identities = 10/45 (22%), Positives = 25/45 (55%)
Frame = +3
Query: 15 GCATDTAIFGEWERSEDGSALRASFNAFKFPSSDNIRFQCNIRVC 149
GC++D A+ + ++D A+ + F +++++F C + +C
Sbjct: 1098 GCSSDLALLTDLTYADDSLTAWAASHVFNVHDAESLKFVCKLSLC 1142
>AF067608-2|AAC17653.1| 225|Caenorhabditis elegans Hypothetical
protein B0511.5 protein.
Length = 225
Score = 30.3 bits (65), Expect = 0.69
Identities = 12/46 (26%), Positives = 22/46 (47%)
Frame = +3
Query: 9 ADGCATDTAIFGEWERSEDGSALRASFNAFKFPSSDNIRFQCNIRV 146
++GC+ DT + + R AF+F + F+CN+R+
Sbjct: 167 SEGCSLDTTRLPNLRYENNKLSARVMSKAFRFGDDVAVEFECNVRL 212
>Z81583-7|CAB04668.1| 268|Caenorhabditis elegans Hypothetical
protein T02G6.7 protein.
Length = 268
Score = 29.9 bits (64), Expect = 0.91
Identities = 18/75 (24%), Positives = 30/75 (40%), Gaps = 2/75 (2%)
Frame = -3
Query: 334 CRATCDVSRRCIVNIGFDTTVTSSRSCPSDIDDGISLSIASRFFRFPKASKPRQFTG--W 161
C + C + C++ G D ++ CPSD D + + S F F G W
Sbjct: 48 CVSRCFSALYCVLATGNDNVNNTNNKCPSDPLDLFPMKMESPLINFLDFKYNITFDGEIW 107
Query: 160 HFPKQTRILHWNLML 116
+F R + +M+
Sbjct: 108 NFKYNCRFIQTFIMI 122
>Z73428-2|CAA97806.2| 572|Caenorhabditis elegans Hypothetical
protein M142.2 protein.
Length = 572
Score = 29.5 bits (63), Expect = 1.2
Identities = 16/66 (24%), Positives = 28/66 (42%), Gaps = 7/66 (10%)
Frame = +3
Query: 9 ADGCATDTAIFGEWERSEDGSALRASFNAFKFPSSDNIRFQCNIRVCF---GKCQ----P 167
++GC D + + ++ FK+ ++FQC I +C G C+ P
Sbjct: 419 SNGCGLDAVLLSTPDYDTSLRLATKPYHVFKYADRPVLQFQCQITLCLKYDGGCEGITPP 478
Query: 168 VNCRGL 185
NC+ L
Sbjct: 479 QNCKKL 484
>Z82073-7|CAB04922.2| 327|Caenorhabditis elegans Hypothetical
protein W06D12.1 protein.
Length = 327
Score = 28.7 bits (61), Expect = 2.1
Identities = 15/44 (34%), Positives = 18/44 (40%)
Frame = +3
Query: 15 GCATDTAIFGEWERSEDGSALRASFNAFKFPSSDNIRFQCNIRV 146
GC D I E E +E + FKF + F C IRV
Sbjct: 83 GCTLDAFILKELEYNEKELEAGQMSSVFKFADKPTVFFSCMIRV 126
>AC024791-10|ABM74563.1| 1736|Caenorhabditis elegans Hypothetical
protein Y47G6A.17 protein.
Length = 1736
Score = 28.7 bits (61), Expect = 2.1
Identities = 13/38 (34%), Positives = 24/38 (63%)
Frame = +3
Query: 201 RKKREAIDNEIPSSISEGQLREEVTVVSNPILTMQRRD 314
R+K+++ N+I SS +LR+E + N I+ +QR +
Sbjct: 890 REKKKSRGNDIESSRDSERLRQERVALINVIIVLQREN 927
>Z81143-9|CAB03520.1| 440|Caenorhabditis elegans Hypothetical
protein ZK265.8 protein.
Length = 440
Score = 27.9 bits (59), Expect = 3.7
Identities = 13/48 (27%), Positives = 19/48 (39%)
Frame = +3
Query: 15 GCATDTAIFGEWERSEDGSALRASFNAFKFPSSDNIRFQCNIRVCFGK 158
GC D + S D A + FKF + F C +++C K
Sbjct: 223 GCPIDPILITGIRYSSDLQRAYAESSVFKFADKPGVWFFCQVQMCMKK 270
>Z81130-4|CAB03414.2| 512|Caenorhabditis elegans Hypothetical
protein T23G11.5 protein.
Length = 512
Score = 27.9 bits (59), Expect = 3.7
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = -1
Query: 378 RQRLDHLWPRSHRHAAGLLATYHDAASLISDSIRRLP 268
+ RLD L R++ + A HDAA LI +R++P
Sbjct: 100 KSRLDELERRANCGEKMIFADAHDAAGLIKRFLRQIP 136
>Z75713-10|CAB00057.1| 440|Caenorhabditis elegans Hypothetical
protein ZK265.8 protein.
Length = 440
Score = 27.9 bits (59), Expect = 3.7
Identities = 13/48 (27%), Positives = 19/48 (39%)
Frame = +3
Query: 15 GCATDTAIFGEWERSEDGSALRASFNAFKFPSSDNIRFQCNIRVCFGK 158
GC D + S D A + FKF + F C +++C K
Sbjct: 223 GCPIDPILITGIRYSSDLQRAYAESSVFKFADKPGVWFFCQVQMCMKK 270
>Z68318-4|CAA92693.2| 1170|Caenorhabditis elegans Hypothetical
protein T21B10.3 protein.
Length = 1170
Score = 27.9 bits (59), Expect = 3.7
Identities = 9/29 (31%), Positives = 17/29 (58%)
Frame = -3
Query: 322 CDVSRRCIVNIGFDTTVTSSRSCPSDIDD 236
CD+ ++ + + TSS++CP +DD
Sbjct: 61 CDLLNHLVIYLNEEIVETSSKACPDGMDD 89
>U39853-1|AAK39227.2| 390|Caenorhabditis elegans Hypothetical
protein F13B9.6 protein.
Length = 390
Score = 27.9 bits (59), Expect = 3.7
Identities = 8/27 (29%), Positives = 15/27 (55%)
Frame = +3
Query: 96 FKFPSSDNIRFQCNIRVCFGKCQPVNC 176
F+F S++ + F+C ++ C C C
Sbjct: 252 FQFTSNNFVHFECQVKPCIKSCHREQC 278
>AL032627-8|CAB63354.2| 373|Caenorhabditis elegans Hypothetical
protein Y41C4A.5 protein.
Length = 373
Score = 27.9 bits (59), Expect = 3.7
Identities = 20/62 (32%), Positives = 28/62 (45%)
Frame = +3
Query: 237 SSISEGQLREEVTVVSNPILTMQRRDTSQVARQRDGGSEATGGQAAGGEVCVSAAGSRGR 416
+S+S +R V +P T T+ A Q + GGQ GGE+ V+ GS G
Sbjct: 143 TSVSMTCVRPGVPTTPDPKATTTPTPTTTKA-QNIIAEDPNGGQLGGGELVVTNPGSVGS 201
Query: 417 SS 422
S
Sbjct: 202 GS 203
>AF047656-13|AAC05105.1| 313|Caenorhabditis elegans Collagen
protein 116 protein.
Length = 313
Score = 27.9 bits (59), Expect = 3.7
Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +3
Query: 285 NPILTMQRRDTSQVARQR-DGGSEATGGQAAGGEV 386
NP+ + RRD S++AR+R G E GG + +
Sbjct: 61 NPLRILARRDASKMARERKQAGYEFDGGASVEAHI 95
>AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen protein
40 protein.
Length = 416
Score = 27.9 bits (59), Expect = 3.7
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = +3
Query: 306 RRDT-SQVARQRDGGSEATGGQAAGGEVCVSAAGSRG 413
+RDT S+ +GG+ A GG GG C G+ G
Sbjct: 97 KRDTRSRRGGYAEGGAAAGGGGGGGGSCCSCGIGAAG 133
>U00049-7|AAC47054.1| 582|Caenorhabditis elegans Hypothetical
protein C18F10.7a protein.
Length = 582
Score = 27.5 bits (58), Expect = 4.8
Identities = 11/39 (28%), Positives = 19/39 (48%)
Frame = +2
Query: 179 RFGCFWKAKETRSNRQRNSVIDIGRTTPRGGNRRIESDI 295
R+G W+ + R+NR + + G T+ RG D+
Sbjct: 464 RYGITWEDDDDRNNRNNRNQVANGNTSRRGLGNNYSDDM 502
>AL110485-7|CAB60355.1| 237|Caenorhabditis elegans Hypothetical
protein Y46G5A.12 protein.
Length = 237
Score = 27.5 bits (58), Expect = 4.8
Identities = 24/85 (28%), Positives = 36/85 (42%), Gaps = 3/85 (3%)
Frame = +3
Query: 207 KREAIDNEIPSSISEGQLREEVTVVSNPILT---MQRRDTSQVARQRDGGSEATGGQAAG 377
K E + + I ++ + EE + N +L +Q + GG A GG+ G
Sbjct: 139 KEEVMGDAIDDALGDAGDEEETDQIVNQVLDELGIQMGEEMAGLPSAAGGLNA-GGERIG 197
Query: 378 GEVCVSAAGSRGRSSTHWTAGFSRG 452
G V+A GS G H AG + G
Sbjct: 198 GRQAVAAGGSGG---AHHGAGGAGG 219
>Z49207-9|CAA89068.2| 379|Caenorhabditis elegans Hypothetical
protein R07E3.3 protein.
Length = 379
Score = 27.1 bits (57), Expect = 6.4
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +3
Query: 15 GCATDTAIFGEWERSEDGSALRASFNAFKFPSSDNIRFQCNIRV 146
GCA D + E D A R + + +K+ DN+ F C I +
Sbjct: 216 GCALDKYLLTNLEYPTDLMAGREA-HVYKYADRDNMYFDCQISI 258
>AC091267-1|AAK31565.1| 789|Caenorhabditis elegans Hypothetical
protein Y37B11A.1 protein.
Length = 789
Score = 27.1 bits (57), Expect = 6.4
Identities = 13/52 (25%), Positives = 24/52 (46%), Gaps = 5/52 (9%)
Frame = +3
Query: 9 ADGCATD-----TAIFGEWERSEDGSALRASFNAFKFPSSDNIRFQCNIRVC 149
++GC D T + ++ + S + + FKFP ++ F C I +C
Sbjct: 622 SNGCEVDQHFLETPNYSRFKDYPEDSYVFQEMSVFKFPGDGDLLFHCKISLC 673
>Z35639-5|CAA84699.2| 534|Caenorhabditis elegans Hypothetical
protein D2045.9 protein.
Length = 534
Score = 26.6 bits (56), Expect = 8.4
Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Frame = -1
Query: 366 DHLWPRSHRHAAGLLATYHDAASLIS-DSIRRL-PPRGVVLPISMTEFRCRLLLVSFAFQ 193
+ LW HRH + + +Y ++S + R+L P + + + E+ + F
Sbjct: 425 EELWISQHRHLSSVEYSYWTLGYMLSLNGARKLLRPNPLKKMVPVDEY------LPIMFN 478
Query: 192 KHPNRDSS 169
KHPN+D S
Sbjct: 479 KHPNKDWS 486
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,554,437
Number of Sequences: 27780
Number of extensions: 183953
Number of successful extensions: 722
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 685
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 718
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 799252350
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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