Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_I04
(582 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 43 4e-05
SPAC12G12.07c |||conserved fungal protein|Schizosaccharomyces po... 32 0.070
SPBC839.10 |usp107|snu71|U1 snRNP-associated protein Usp107|Schi... 30 0.28
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 30 0.28
SPBC29A10.13 |atp7||F0-ATPase subunit D|Schizosaccharomyces pomb... 29 0.37
SPAC24C9.03 |mvd1||diphosphomevalonate decarboxylase |Schizosacc... 29 0.50
SPCC188.04c |spc25||kinetochore protein Spc25|Schizosaccharomyce... 29 0.50
SPBC2F12.05c |||sterol binding ankyrin repeat protein|Schizosacc... 29 0.65
SPAC10F6.10 |||protein kinase, RIO family |Schizosaccharomyces p... 28 0.87
SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78 |Schizosacch... 28 1.1
SPAC19A8.05c |vps27|sst4|sorting receptor for ubiquitinated memb... 27 1.5
SPBC365.20c ||SPBC557.06c|nicotinamidase |Schizosaccharomyces po... 27 1.5
SPAPB21F2.03 |||ribosome biogenesis protein |Schizosaccharomyces... 27 2.0
SPAC22E12.05c |rer1||Rer1 family protein|Schizosaccharomyces pom... 27 2.0
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 27 2.0
SPAC9G1.06c |cyk3||cytokinesis protein Cyk3|Schizosaccharomyces ... 27 2.0
SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3 ... 27 2.6
SPBC530.15c ||SPBC661.01|spermidine family transporter |Schizosa... 27 2.6
SPBC25H2.13c |cdc20|pol2|DNA polymerase epsilon catalytic subuni... 26 3.5
SPBC1734.04 ||SPBC337.20|mannosyltransferase complex subunit, An... 26 3.5
SPCC16A11.13 |usp106|luc7|U1 snRNP-associated protein Usp106|Sch... 26 3.5
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 26 3.5
SPBC1711.16 |||WD repeat protein Pwp1 |Schizosaccharomyces pombe... 26 4.6
SPAC25A8.03c ||SPAC3C7.15c|DUF185 protein|Schizosaccharomyces po... 26 4.6
SPAC26H5.12 |rpo41||mitochondrial DNA-directed RNA polymerase|Sc... 26 4.6
SPCC63.14 |||conserved fungal protein|Schizosaccharomyces pombe|... 25 6.1
SPAC1565.07c |||TATA binding protein interacting protein |Schizo... 25 6.1
SPCC1393.05 |||sequence orphan|Schizosaccharomyces pombe|chr 3||... 25 6.1
SPAC11E3.08c |nse6||Smc5-6 complex non-SMC subunit Nse6|Schizosa... 25 8.1
SPAC19B12.02c |||1,3-beta-glucanosyltransferase|Schizosaccharomy... 25 8.1
SPBC28F2.11 |||INO80 complex subunit |Schizosaccharomyces pombe|... 25 8.1
SPAC1D4.09c |||DUF602 family protein|Schizosaccharomyces pombe|c... 25 8.1
SPAC3G9.05 |||GTPase activating protein |Schizosaccharomyces pom... 25 8.1
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 42.7 bits (96), Expect = 4e-05
Identities = 35/110 (31%), Positives = 56/110 (50%)
Frame = +3
Query: 240 KHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAK 419
K +DF+K I + A +NS + E LKE S + ++ EL+N L+ + + K
Sbjct: 455 KKIKDFEK-IEQDLRACLNSSSNE-----LKEKSALIDKKDQELNN-LREQIKEQK-KVS 506
Query: 420 EVLQQARQNLERTVEDLRKAHPDVEKQATALHEKLQTAIQNTLKESQNLA 569
E Q + Q+L+R + + +K H E Q L +LQT I N+ S L+
Sbjct: 507 ESTQSSLQSLQRDILNEKKKHEVYESQLNELKGELQTEISNSEHLSSQLS 556
Score = 31.1 bits (67), Expect = 0.12
Identities = 31/113 (27%), Positives = 58/113 (51%), Gaps = 2/113 (1%)
Frame = +3
Query: 231 DLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANG 410
DLEK +D +K + ++ TE+++ +L+EG + ++++ELS+ L+ A
Sbjct: 1341 DLEKALKDSEKNFLRK-----EAEMTENIH-SLEEGKEETKKEIAELSSRLEDNQL-ATN 1393
Query: 411 KAKEVLQQARQNLERTVEDLRKAHPDVEKQATALHEKL--QTAIQNTLKESQN 563
K K L Q + R ED+ K + E +L E L Q +++L +++N
Sbjct: 1394 KLKNQLDHLNQEI-RLKEDVLK---EKESLIISLEESLSNQRQKESSLLDAKN 1442
>SPAC12G12.07c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 412
Score = 31.9 bits (69), Expect = 0.070
Identities = 31/135 (22%), Positives = 54/135 (40%), Gaps = 18/135 (13%)
Frame = +3
Query: 192 AMVRRDAPNTILQDLEKHAQDFQKTI------SEQFNAIVNSKNTESLNKALKEGSDSMV 353
A+ +DA T L +L++ T QF A N+K E + +EG D+
Sbjct: 65 ALQGKDAVLTTLNELKELLSQIDATRIRDEKHKRQFEATENAKRKEEIEAQYREGYDTAQ 124
Query: 354 QQVSELSNSLQGA------------LTDANGKAKEVLQQARQNLERTVEDLRKAHPDVEK 497
+QVS L L+ A A K ++ + + E+ V DL + DV
Sbjct: 125 KQVSSLVRFLRFASHNCVHPSDDAPFNSAVEKLLVIVYEGTEKSEKAVADLNDSSTDVVP 184
Query: 498 QATALHEKLQTAIQN 542
++ + + + + N
Sbjct: 185 ESEVSFQTISSRVDN 199
>SPBC839.10 |usp107|snu71|U1 snRNP-associated protein
Usp107|Schizosaccharomyces pombe|chr 2|||Manual
Length = 695
Score = 29.9 bits (64), Expect = 0.28
Identities = 26/101 (25%), Positives = 47/101 (46%), Gaps = 10/101 (9%)
Frame = +3
Query: 270 SEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTD------ANGKAKEV-- 425
+EQF+ + + N + + G + + ++++ N +G + A K KE+
Sbjct: 189 NEQFSRALEALNDFVVPPLYEGGPSTRLSLITDVEN--EGLYREWQTSRYARNKQKEINI 246
Query: 426 LQQARQNLERTVEDLRK--AHPDVEKQATALHEKLQTAIQN 542
LQQ R NLER +D+ +E+ A EK + +QN
Sbjct: 247 LQQIRFNLERICQDIGNFDVRSRIERAARQAREKNEKLLQN 287
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 29.9 bits (64), Expect = 0.28
Identities = 24/93 (25%), Positives = 44/93 (47%), Gaps = 9/93 (9%)
Frame = +3
Query: 327 LKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQA---RQNLERTVEDLRKAHPDVEK 497
+ + S++ V + E + L L+ K+ L++ +Q L EDLRK D EK
Sbjct: 1005 ITKDSETRVALLLEENKHLNNELSSHRNAEKQHLEKENDYKQQLLLVTEDLRKTREDYEK 1064
Query: 498 Q------ATALHEKLQTAIQNTLKESQNLAKEV 578
+ A + +KL+ L++ ++L KE+
Sbjct: 1065 ELLRHADARSTLQKLREDYTKALEQVEDLNKEI 1097
Score = 26.6 bits (56), Expect = 2.6
Identities = 20/60 (33%), Positives = 32/60 (53%)
Frame = +3
Query: 348 MVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTVEDLRKAHPDVEKQATALHEKLQ 527
+VQ+ S L + L +D + K E L+ + R V+DL K + +Q T L+EK+Q
Sbjct: 194 LVQEKSALVSDLASLQSD-HSKVCEKLEVS----SRQVQDLEKKLAGLAQQNTELNEKIQ 248
>SPBC29A10.13 |atp7||F0-ATPase subunit D|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 175
Score = 29.5 bits (63), Expect = 0.37
Identities = 11/24 (45%), Positives = 19/24 (79%)
Frame = +3
Query: 426 LQQARQNLERTVEDLRKAHPDVEK 497
++QAR E T+ED+++A P++EK
Sbjct: 126 IEQARPTEEITIEDMKQAVPEIEK 149
>SPAC24C9.03 |mvd1||diphosphomevalonate decarboxylase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 393
Score = 29.1 bits (62), Expect = 0.50
Identities = 25/97 (25%), Positives = 41/97 (42%), Gaps = 4/97 (4%)
Frame = +3
Query: 291 VNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTVEDL 470
+N S++ L + D + S + NG A+E+ A + L VE+L
Sbjct: 29 LNLPTNSSISVTLSQ-DDLRTVTTASCSEKFENDTLWLNGNAEEIF--ANKRLRVCVEEL 85
Query: 471 RKAHPDVEKQATALHE----KLQTAIQNTLKESQNLA 569
RKA D+E++ L + KL +N + LA
Sbjct: 86 RKARLDLEEENDDLDKIGALKLHVVSENNFPTAAGLA 122
>SPCC188.04c |spc25||kinetochore protein Spc25|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 238
Score = 29.1 bits (62), Expect = 0.50
Identities = 27/108 (25%), Positives = 49/108 (45%), Gaps = 3/108 (2%)
Frame = +3
Query: 252 DFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQ 431
D K+ FN+I + E K L ++ + +Q+SE++ +A KA++ L+
Sbjct: 14 DSLKSKISNFNSIFDRFLQEERKKLLNNKNEYL-RQLSEIN--------EAQKKAEKSLE 64
Query: 432 QARQNLERTVEDLRKAHPD---VEKQATALHEKLQTAIQNTLKESQNL 566
Q + E L K H + E++ + EKL ++ K S+ L
Sbjct: 65 QTEARKQNFTELLEKEHEEQAITEQEIFSFQEKLDAMLKRKQKLSEEL 112
>SPBC2F12.05c |||sterol binding ankyrin repeat
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1310
Score = 28.7 bits (61), Expect = 0.65
Identities = 26/98 (26%), Positives = 38/98 (38%), Gaps = 3/98 (3%)
Frame = +2
Query: 287 NRQLKEHGELEQSTEGRLRLHGAAGLRVIQQSTGCVDRRKR*S*GSAPTSSPELGAHSRG 466
N KE +Q TEG+ H QQ+T RK S P+ P G H+R
Sbjct: 673 NHHRKESIPSKQPTEGQ---HARQESLPSQQTTETKHLRKE----STPSKQPTEGQHTRQ 725
Query: 467 SPQGAPRRRETSHRITREAANRHP---EHTKGEPEPGE 571
+ + ET H ++ P +H + E P +
Sbjct: 726 ESLPSQQTTETKHLRKESIPSKQPTEGQHARQESLPSQ 763
Score = 28.3 bits (60), Expect = 0.87
Identities = 20/69 (28%), Positives = 29/69 (42%), Gaps = 3/69 (4%)
Frame = +2
Query: 374 QQSTGCVDRRKR*S*GSAPTSSPELGAHSRGSPQGAPRRRETSHRITREAANRHP---EH 544
QQST RK S P+ P G H+R + + ET H ++ P +H
Sbjct: 667 QQSTVSNHHRKE----SIPSKQPTEGQHARQESLPSQQTTETKHLRKESTPSKQPTEGQH 722
Query: 545 TKGEPEPGE 571
T+ E P +
Sbjct: 723 TRQESLPSQ 731
>SPAC10F6.10 |||protein kinase, RIO family |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 521
Score = 28.3 bits (60), Expect = 0.87
Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Frame = +3
Query: 252 DFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTD-ANGKAKEVL 428
D T Q + I+ ++ +ES + A SM + S+S A NG+AKE
Sbjct: 426 DLNDTTKNQNDQILPNETSESDDDA--NSISSMENEEERTSDSKSSAKQGKGNGRAKETP 483
Query: 429 QQARQNLERTVED 467
++ R ++T ED
Sbjct: 484 EEKRARKKKTKED 496
>SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 803
Score = 27.9 bits (59), Expect = 1.1
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 6/59 (10%)
Frame = +3
Query: 300 KNTESLNKALKEGSDSMVQQVSELSNSLQGA------LTDANGKAKEVLQQARQNLERT 458
K T++ + +E +S + + E + L A L D+ KAK L+QAR LERT
Sbjct: 364 KETDTTSVERREKLESKLTDLKEEQDKLSAAWEEERKLLDSIKKAKTELEQARIELERT 422
>SPAC19A8.05c |vps27|sst4|sorting receptor for ubiquitinated
membrane proteins, ESCRT 0 complex|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 610
Score = 27.5 bits (58), Expect = 1.5
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = -3
Query: 445 FWRACWSTSLALPFASVNAPCRLLDNSETCCTMESEPSFS 326
F C S +L+LP +N P R+ D +C ++ ++P S
Sbjct: 199 FCNQCSSKTLSLPHLGINQPVRVCD---SCYSLRTKPKGS 235
>SPBC365.20c ||SPBC557.06c|nicotinamidase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 220
Score = 27.5 bits (58), Expect = 1.5
Identities = 16/59 (27%), Positives = 31/59 (52%)
Frame = +3
Query: 210 APNTILQDLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQ 386
A + +++ HA+ + T + V +TES N+A+K+ D+ ++ +SE LQ
Sbjct: 159 ATDICVKETALHARHWYNTYI--ISEAVKGSSTESHNQAIKDFRDAKIEVISEKDPILQ 215
>SPAPB21F2.03 |||ribosome biogenesis protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 172
Score = 27.1 bits (57), Expect = 2.0
Identities = 10/44 (22%), Positives = 26/44 (59%)
Frame = +3
Query: 429 QQARQNLERTVEDLRKAHPDVEKQATALHEKLQTAIQNTLKESQ 560
++AR+NL+ V + + P+++ + + +L+ I+++L Q
Sbjct: 85 RKARENLKVNVSSIGEVLPEIDLDISVANSRLKPVIKDSLSSKQ 128
>SPAC22E12.05c |rer1||Rer1 family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 184
Score = 27.1 bits (57), Expect = 2.0
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +1
Query: 136 VPPISLSDSFRPYVRRLTE 192
V P S D FRP++RRL E
Sbjct: 97 VLPTSKDDEFRPFIRRLPE 115
>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1208
Score = 27.1 bits (57), Expect = 2.0
Identities = 19/91 (20%), Positives = 44/91 (48%), Gaps = 4/91 (4%)
Frame = +3
Query: 306 TESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQN----LERTVEDLR 473
TE+ + L + + ++ +++++L N+ Q + + K + + LE+T+EDL+
Sbjct: 875 TETKHDILAQRNRNVSEKMNDLENAAQKFFSSPDRKNGYLYPSEHTSKIEYLEKTIEDLK 934
Query: 474 KAHPDVEKQATALHEKLQTAIQNTLKESQNL 566
A D K L + + + + T K + +
Sbjct: 935 LALQDELKNRNLLMDDISSYNKQTTKLQEKI 965
>SPAC9G1.06c |cyk3||cytokinesis protein Cyk3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 886
Score = 27.1 bits (57), Expect = 2.0
Identities = 36/135 (26%), Positives = 61/135 (45%), Gaps = 7/135 (5%)
Frame = +3
Query: 192 AMVRRDAPNTILQDLEKHAQDFQKTISEQFNA--IVNSKNTESLNKALKEGSDSMVQQVS 365
+M R A + +K + D T S+Q +V S N +LNK +E SDS+ Q S
Sbjct: 75 SMSRTSASSFRYSSPQKSSIDTPITSSDQGLTPDLVGSSN--ALNKPTRE-SDSLKHQKS 131
Query: 366 E-LSNSLQGALTDANGKAKEVLQQARQNLERTVEDLRKAHPDVEKQATALHEK----LQT 530
+ NSL +L+ ++ +R NL+ + A D + A L L++
Sbjct: 132 HPMLNSLGSSLSLKKSVSRPPSSMSRTNLDVSSRWDNTADNDSQIDAQDLSRSTPSPLRS 191
Query: 531 AIQNTLKESQNLAKE 575
A++N L+ + K+
Sbjct: 192 AMENVLQSLNAMGKK 206
>SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 932
Score = 26.6 bits (56), Expect = 2.6
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Frame = +3
Query: 267 ISEQFN-AIVNSKNTESLNKALKEGSDSMVQQVSELSNS--LQGALTDANGKAKEVLQQA 437
I +Q N +I N KNT N + K + + +S +SNS A+ + +AKE + A
Sbjct: 483 IPQQSNKSIGNHKNTSVANVSSKVANSKFERNISMMSNSNASSPAIFEVGAEAKEKTKDA 542
>SPBC530.15c ||SPBC661.01|spermidine family transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 516
Score = 26.6 bits (56), Expect = 2.6
Identities = 14/37 (37%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Frame = +3
Query: 450 ERTVEDLRK-AHPDVEKQATALHEKLQTAIQNTLKES 557
ERT E + A D+EKQ + H++ Q+++ + L+ES
Sbjct: 3 ERTSESSSESASFDLEKQQSNHHDRYQSSVSSELEES 39
>SPBC25H2.13c |cdc20|pol2|DNA polymerase epsilon catalytic subunit a
Pol2 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 2199
Score = 26.2 bits (55), Expect = 3.5
Identities = 11/50 (22%), Positives = 25/50 (50%)
Frame = +1
Query: 49 HRHGRQVLRVVRLRCPREYDDSPSGFPVPVPPISLSDSFRPYVRRLTERW 198
H+ R V RV + + ++ +S + V P+S D + +++ ++W
Sbjct: 1211 HKDKRIVARVTKRKLLQQSGNSEAPVSFEVKPVSFMDGYSNWLKYAKKKW 1260
>SPBC1734.04 ||SPBC337.20|mannosyltransferase complex subunit, Anp
family |Schizosaccharomyces pombe|chr 2|||Manual
Length = 430
Score = 26.2 bits (55), Expect = 3.5
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = +3
Query: 210 APNTILQDLEKHAQD 254
APNTIL+DL +H +D
Sbjct: 227 APNTILEDLMRHDKD 241
>SPCC16A11.13 |usp106|luc7|U1 snRNP-associated protein
Usp106|Schizosaccharomyces pombe|chr 3|||Manual
Length = 264
Score = 26.2 bits (55), Expect = 3.5
Identities = 27/111 (24%), Positives = 52/111 (46%), Gaps = 10/111 (9%)
Frame = +3
Query: 225 LQDLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALT-- 398
L+DLE+H D K I I ++ ++ K +E D +++ + +S++ +T
Sbjct: 85 LEDLERHVDDCNKRID-----IAEARREKT--KEEEERIDELMRDIIHTDHSIEVIITEM 137
Query: 399 DANGKAKEVLQQARQNLE-RTVEDLRK-------AHPDVEKQATALHEKLQ 527
+A K K V + +E ++ RK + ++ QA+ H+KLQ
Sbjct: 138 EALAKRKLVNDAVKHFIELNRLKTYRKELYDEVISMNEIPSQASTTHQKLQ 188
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 26.2 bits (55), Expect = 3.5
Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 1/82 (1%)
Frame = +3
Query: 309 ESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTVEDLRKAHPD 488
ES N+ DSM ++ ELSN L+ AN K E R+ + DLR+
Sbjct: 824 ESSNQEYTATVDSMNSRILELSNDLR----VANSKLSECSDDVRRLTLQNSFDLREHQTL 879
Query: 489 V-EKQATALHEKLQTAIQNTLK 551
V + Q+ K +Q T++
Sbjct: 880 VLQLQSNITELKQDITLQRTVR 901
>SPBC1711.16 |||WD repeat protein Pwp1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 516
Score = 25.8 bits (54), Expect = 4.6
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +3
Query: 405 NGKAKEVLQQARQNLERTVEDLRKAHPDVEKQATALHEKLQTA 533
N +K L+ AR +L+ ++ED KA+ + E+ LQT+
Sbjct: 33 NQLSKLKLEDARADLQSSMEDSNKANGNGEETTDGAEGVLQTS 75
>SPAC25A8.03c ||SPAC3C7.15c|DUF185 protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 467
Score = 25.8 bits (54), Expect = 4.6
Identities = 11/38 (28%), Positives = 19/38 (50%)
Frame = +1
Query: 55 HGRQVLRVVRLRCPREYDDSPSGFPVPVPPISLSDSFR 168
H VLR +C +E+D G P+P +++ + R
Sbjct: 90 HSVHVLRKEGHKCSKEFDPFLHGIPIPQKALNIYEKQR 127
>SPAC26H5.12 |rpo41||mitochondrial DNA-directed RNA
polymerase|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1120
Score = 25.8 bits (54), Expect = 4.6
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +3
Query: 393 LTDANGKAKEVLQQARQN 446
LTD AKE+LQQAR N
Sbjct: 83 LTDVLSNAKELLQQARLN 100
>SPCC63.14 |||conserved fungal protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1184
Score = 25.4 bits (53), Expect = 6.1
Identities = 14/48 (29%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = -3
Query: 211 ASRRTIAP*AYEHTDGTSHLKRSGEPEP-EIQTANRHTHEGNAGEQHE 71
A+ +AP +EH SH + E EP E + + H E + + E
Sbjct: 773 ANTGPVAPPYFEHETEPSHYEEEEEEEPEERREESSHFSESSGNNEFE 820
>SPAC1565.07c |||TATA binding protein interacting protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1220
Score = 25.4 bits (53), Expect = 6.1
Identities = 26/90 (28%), Positives = 44/90 (48%), Gaps = 2/90 (2%)
Frame = +3
Query: 315 LNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTVEDLRKAHPDVE 494
L K E SD ++ ++ LS+ L L DAN L+ L+ ++ L A P+V+
Sbjct: 6 LLKKYVESSDKDIRYMA-LSD-LAARLNDANHLKNLKLESFPDTLDVLLQALSDASPEVQ 63
Query: 495 KQATALHEKLQTAI-QNTLKES-QNLAKEV 578
++A + + I Q+ LK + +NL V
Sbjct: 64 QEAVRCVAIISSKIPQDKLKSTVENLLSGV 93
>SPCC1393.05 |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 956
Score = 25.4 bits (53), Expect = 6.1
Identities = 15/56 (26%), Positives = 28/56 (50%)
Frame = +3
Query: 216 NTILQDLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSL 383
NT+ + + K +Q FQ S +FN + N ++K+L++ + S+ N L
Sbjct: 487 NTVDEAITKQSQTFQLVNSNEFNEV----NANDVHKSLRQNCAKLDFDDSKSKNLL 538
>SPAC11E3.08c |nse6||Smc5-6 complex non-SMC subunit
Nse6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 522
Score = 25.0 bits (52), Expect = 8.1
Identities = 22/86 (25%), Positives = 35/86 (40%)
Frame = +3
Query: 219 TILQDLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALT 398
TIL L + Q F+K I+ SKN +S +L + D + + +L +
Sbjct: 343 TILSSLSRSCQKFRKKIAFTLFVGKQSKNDDSDFSSLCQRLDEISASCNNDYTTLLYQIR 402
Query: 399 DANGKAKEVLQQARQNLERTVEDLRK 476
E + + LE +E LRK
Sbjct: 403 TFGYAVDEKHFKTNERLECLLEKLRK 428
>SPAC19B12.02c |||1,3-beta-glucanosyltransferase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 542
Score = 25.0 bits (52), Expect = 8.1
Identities = 12/52 (23%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = -3
Query: 466 SSTVRSKFWRACWSTSLALPFASVNAPCRLLDNSETCCTME--SEPSFSALF 317
++T+ + + W + +LP A C +D++ +C + S +S LF
Sbjct: 340 TATMSCQATNSAWMAATSLPPTPSEAVCECMDSTRSCVINDDVSSDDYSDLF 391
>SPBC28F2.11 |||INO80 complex subunit |Schizosaccharomyces pombe|chr
2|||Manual
Length = 310
Score = 25.0 bits (52), Expect = 8.1
Identities = 14/55 (25%), Positives = 29/55 (52%)
Frame = +3
Query: 321 KALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTVEDLRKAHP 485
+ ++E S++ + SE+S + A+TD + KE+ A ++ + +KA P
Sbjct: 30 REIEESLPSILGEKSEVSKPFKPAVTDPSNAKKEI-NMAIESPSKKATSPKKATP 83
>SPAC1D4.09c |||DUF602 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 240
Score = 25.0 bits (52), Expect = 8.1
Identities = 13/40 (32%), Positives = 24/40 (60%)
Frame = +3
Query: 261 KTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNS 380
KT+S++ + S+ T SLNKA K+ + + ++ +S S
Sbjct: 164 KTLSKRLLDLALSEKTHSLNKASKKSNKNGDKKRKHVSKS 203
>SPAC3G9.05 |||GTPase activating protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 659
Score = 25.0 bits (52), Expect = 8.1
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = +1
Query: 448 WSAQSRISARRTPTSRNKPPHYTRSCKPP 534
+ QSR S S N PP+ TR+ P
Sbjct: 103 FEVQSRYSGALKEVSSNTPPNMTRAASQP 131
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,204,407
Number of Sequences: 5004
Number of extensions: 42850
Number of successful extensions: 247
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 229
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 247
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 250133048
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -