BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_H24
(591 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY898652-1|AAX83121.1| 349|Apis mellifera AKH receptor protein. 22 3.9
AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 22 3.9
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 22 3.9
AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 22 3.9
AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 22 3.9
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 22 5.2
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 21 6.8
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 21 6.8
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 21 6.8
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 21 6.8
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 21 6.8
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 21 6.8
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 21 6.8
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 21 6.8
AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein. 21 6.8
DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex det... 21 9.0
AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly pro... 21 9.0
AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precur... 21 9.0
>AY898652-1|AAX83121.1| 349|Apis mellifera AKH receptor protein.
Length = 349
Score = 22.2 bits (45), Expect = 3.9
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -2
Query: 575 VKERDSTFISNAVYNNSNYLPILP 504
+K +T + N NNSNY +LP
Sbjct: 5 IKIITTTGLENWRVNNSNYTELLP 28
>AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 22.2 bits (45), Expect = 3.9
Identities = 6/14 (42%), Positives = 12/14 (85%)
Frame = -2
Query: 560 STFISNAVYNNSNY 519
S+ ++N ++NN+NY
Sbjct: 305 SSLLNNTIHNNNNY 318
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 22.2 bits (45), Expect = 3.9
Identities = 6/14 (42%), Positives = 12/14 (85%)
Frame = -2
Query: 560 STFISNAVYNNSNY 519
S+ ++N ++NN+NY
Sbjct: 316 SSLLNNTIHNNNNY 329
>AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 22.2 bits (45), Expect = 3.9
Identities = 6/14 (42%), Positives = 12/14 (85%)
Frame = -2
Query: 560 STFISNAVYNNSNY 519
S+ ++N ++NN+NY
Sbjct: 316 SSLLNNTIHNNNNY 329
>AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 22.2 bits (45), Expect = 3.9
Identities = 6/14 (42%), Positives = 12/14 (85%)
Frame = -2
Query: 560 STFISNAVYNNSNY 519
S+ ++N ++NN+NY
Sbjct: 305 SSLLNNTIHNNNNY 318
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 21.8 bits (44), Expect = 5.2
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +2
Query: 518 NNYYYYKQHSI*MYYLSLSPIPV 586
NNY YK+ + Y+ PIPV
Sbjct: 101 NNYNNYKKLYYNINYIEQIPIPV 123
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 6.8
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +2
Query: 518 NNYYYYKQHSI*MYYLSLSPIPV 586
NNY YK+ + Y+ P+PV
Sbjct: 101 NNYNNYKKLYYNINYIEQIPVPV 123
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 6.8
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +2
Query: 518 NNYYYYKQHSI*MYYLSLSPIPV 586
NNY YK+ + Y+ P+PV
Sbjct: 101 NNYNNYKKLYYNINYIEQIPVPV 123
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 6.8
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +2
Query: 518 NNYYYYKQHSI*MYYLSLSPIPV 586
NNY YK+ + Y+ P+PV
Sbjct: 101 NNYNNYKKLYYNINYIEQIPVPV 123
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 6.8
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +2
Query: 518 NNYYYYKQHSI*MYYLSLSPIPV 586
NNY YK+ + Y+ P+PV
Sbjct: 101 NNYNNYKKLYYNINYIEQIPVPV 123
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 6.8
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +2
Query: 518 NNYYYYKQHSI*MYYLSLSPIPV 586
NNY YK+ + Y+ P+PV
Sbjct: 101 NNYNNYKKLYYNINYIEQIPVPV 123
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 6.8
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +2
Query: 518 NNYYYYKQHSI*MYYLSLSPIPV 586
NNY YK+ + Y+ P+PV
Sbjct: 101 NNYNNYKKLYYNINYIEQIPVPV 123
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 6.8
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +2
Query: 518 NNYYYYKQHSI*MYYLSLSPIPV 586
NNY YK+ + Y+ P+PV
Sbjct: 101 NNYNNYKKLYYNINYIEQIPVPV 123
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 21.4 bits (43), Expect = 6.8
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +2
Query: 518 NNYYYYKQHSI*MYYLSLSPIPV 586
NNY YK+ + Y+ P+PV
Sbjct: 109 NNYNNYKKLYYNINYIEQIPVPV 131
>AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein.
Length = 602
Score = 21.4 bits (43), Expect = 6.8
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = +1
Query: 280 DPDYLQRKKKKKN 318
DPD L+RK++K N
Sbjct: 329 DPDSLRRKRQKIN 341
>DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 9.0
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = +2
Query: 518 NNYYYYKQHSI*MYYLSLSPIPV 586
NNY YK+ + Y+ P+P+
Sbjct: 99 NNYNNYKKLYYNINYIEQVPVPI 121
>AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly
protein MRJP6 protein.
Length = 437
Score = 21.0 bits (42), Expect = 9.0
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +2
Query: 518 NNYYYYKQHSI*MYYLSLSP 577
NN YY S +YY+++ P
Sbjct: 264 NNLYYSPLTSHSLYYVNMEP 283
>AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precursor
protein.
Length = 405
Score = 21.0 bits (42), Expect = 9.0
Identities = 15/52 (28%), Positives = 22/52 (42%)
Frame = -2
Query: 287 SGSYCT*TSKILSYINYKRFVVE*LNNVEIKFSKWSNRRET*NKFSVILDIN 132
SGS CT T IN K +VE N + ++ NK+ + +N
Sbjct: 66 SGSKCTWTITSYHRINLKCSLVEFSENKNCNAGSLTVKKNFANKYCGNITLN 117
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,676
Number of Sequences: 438
Number of extensions: 2634
Number of successful extensions: 19
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17237673
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -