Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0014_H21
         (263 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X82782-1|CAA58023.1|  271|Drosophila melanogaster ribosomal prot...    77   5e-15
AY089570-1|AAL90308.1|  271|Drosophila melanogaster RE05022p pro...    77   5e-15
AE014298-903|AAF46169.1|  271|Drosophila melanogaster CG3314-PD,...    77   5e-15
AE014298-902|AAN09172.1|  271|Drosophila melanogaster CG3314-PC,...    77   5e-15
AE014298-901|AAN09170.1|  271|Drosophila melanogaster CG3314-PA,...    77   5e-15
AY119103-1|AAM50963.1|  853|Drosophila melanogaster RE06730p pro...    27   4.8  
AE014297-2882|AAF55818.1|  853|Drosophila melanogaster CG3822-PA...    27   4.8  

>X82782-1|CAA58023.1|  271|Drosophila melanogaster ribosomal protein
           L7a protein.
          Length = 271

 Score = 76.6 bits (180), Expect = 5e-15
 Identities = 33/39 (84%), Positives = 36/39 (92%)
 Frame = +1

Query: 145 LFEKRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQRQKAV 261
           LFEKR KNF IGQ++QP RDLSRFVRWPKYIR+QRQKAV
Sbjct: 36  LFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAV 74


>AY089570-1|AAL90308.1|  271|Drosophila melanogaster RE05022p
           protein.
          Length = 271

 Score = 76.6 bits (180), Expect = 5e-15
 Identities = 33/39 (84%), Positives = 36/39 (92%)
 Frame = +1

Query: 145 LFEKRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQRQKAV 261
           LFEKR KNF IGQ++QP RDLSRFVRWPKYIR+QRQKAV
Sbjct: 36  LFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAV 74


>AE014298-903|AAF46169.1|  271|Drosophila melanogaster CG3314-PD,
           isoform D protein.
          Length = 271

 Score = 76.6 bits (180), Expect = 5e-15
 Identities = 33/39 (84%), Positives = 36/39 (92%)
 Frame = +1

Query: 145 LFEKRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQRQKAV 261
           LFEKR KNF IGQ++QP RDLSRFVRWPKYIR+QRQKAV
Sbjct: 36  LFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAV 74


>AE014298-902|AAN09172.1|  271|Drosophila melanogaster CG3314-PC,
           isoform C protein.
          Length = 271

 Score = 76.6 bits (180), Expect = 5e-15
 Identities = 33/39 (84%), Positives = 36/39 (92%)
 Frame = +1

Query: 145 LFEKRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQRQKAV 261
           LFEKR KNF IGQ++QP RDLSRFVRWPKYIR+QRQKAV
Sbjct: 36  LFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAV 74


>AE014298-901|AAN09170.1|  271|Drosophila melanogaster CG3314-PA,
           isoform A protein.
          Length = 271

 Score = 76.6 bits (180), Expect = 5e-15
 Identities = 33/39 (84%), Positives = 36/39 (92%)
 Frame = +1

Query: 145 LFEKRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQRQKAV 261
           LFEKR KNF IGQ++QP RDLSRFVRWPKYIR+QRQKAV
Sbjct: 36  LFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAV 74


>AY119103-1|AAM50963.1|  853|Drosophila melanogaster RE06730p
           protein.
          Length = 853

 Score = 26.6 bits (56), Expect = 4.8
 Identities = 9/16 (56%), Positives = 14/16 (87%)
 Frame = +2

Query: 185 TSSQPEIYPVSCDGRN 232
           TS Q +I+P+SCDG++
Sbjct: 320 TSQQIDIHPISCDGQS 335


>AE014297-2882|AAF55818.1|  853|Drosophila melanogaster CG3822-PA
           protein.
          Length = 853

 Score = 26.6 bits (56), Expect = 4.8
 Identities = 9/16 (56%), Positives = 14/16 (87%)
 Frame = +2

Query: 185 TSSQPEIYPVSCDGRN 232
           TS Q +I+P+SCDG++
Sbjct: 320 TSQQIDIHPISCDGQS 335


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,172,322
Number of Sequences: 53049
Number of extensions: 157867
Number of successful extensions: 280
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 277
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 280
length of database: 24,988,368
effective HSP length: 66
effective length of database: 21,487,134
effective search space used: 451229814
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)