Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_H20
(457 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81132-9|CAB03438.1| 320|Caenorhabditis elegans Hypothetical pr... 27 4.9
Z81545-4|CAB04439.1| 352|Caenorhabditis elegans Hypothetical pr... 27 6.5
Z54327-12|CAD56557.1| 543|Caenorhabditis elegans Hypothetical p... 27 6.5
Z54327-11|CAD56556.1| 589|Caenorhabditis elegans Hypothetical p... 27 6.5
Z54307-8|CAD56577.1| 543|Caenorhabditis elegans Hypothetical pr... 27 6.5
Z54307-7|CAD56576.1| 589|Caenorhabditis elegans Hypothetical pr... 27 6.5
Z54307-5|CAD56575.1| 513|Caenorhabditis elegans Hypothetical pr... 27 6.5
Z54307-4|CAD56574.1| 510|Caenorhabditis elegans Hypothetical pr... 27 6.5
Z54307-3|CAD56573.1| 516|Caenorhabditis elegans Hypothetical pr... 27 6.5
Z54307-2|CAD56572.1| 503|Caenorhabditis elegans Hypothetical pr... 27 6.5
Z54307-1|CAA91092.2| 493|Caenorhabditis elegans Hypothetical pr... 27 6.5
AF068714-9|AAC17810.1| 87|Caenorhabditis elegans Hypothetical ... 27 8.6
>Z81132-9|CAB03438.1| 320|Caenorhabditis elegans Hypothetical
protein T26E4.11 protein.
Length = 320
Score = 27.5 bits (58), Expect = 4.9
Identities = 20/73 (27%), Positives = 31/73 (42%)
Frame = -2
Query: 399 THHALIENNYSQATQSLFITITLGIYFTILQAYEYLEAPFTIADSIYGSTFFMATGFHGL 220
T+ +NN F+TIT I L ++E F D + ++ F +
Sbjct: 213 TNSRSTDNNTRTTKLVCFVTITFLISTVPLGILYFIEMIFFDTDGLESIIRKNSSIFKLI 272
Query: 219 HVIIGTLFLLICF 181
+I GT+ LICF
Sbjct: 273 SLINGTIHFLICF 285
>Z81545-4|CAB04439.1| 352|Caenorhabditis elegans Hypothetical
protein F49H6.4 protein.
Length = 352
Score = 27.1 bits (57), Expect = 6.5
Identities = 10/24 (41%), Positives = 11/24 (45%)
Frame = -1
Query: 280 YYCR*YLWINFFYGYWISWPSCNY 209
YY YL N Y +W SW Y
Sbjct: 6 YYATTYLTCNVEYSFWASWKGVAY 29
>Z54327-12|CAD56557.1| 543|Caenorhabditis elegans Hypothetical
protein F14F11.1c protein.
Length = 543
Score = 27.1 bits (57), Expect = 6.5
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 5/48 (10%)
Frame = -2
Query: 303 YEYLEAPFTIADSIYGSTFFMATGFHGLHVIIGTL----FL-LICFLR 175
++++ +P TI D I FF + H + + G+L FL +IC LR
Sbjct: 309 HKFVRSPLTIIDVISTGAFFFESLLHAILIQTGSLVTLDFLSMICVLR 356
>Z54327-11|CAD56556.1| 589|Caenorhabditis elegans Hypothetical
protein F14F11.1b protein.
Length = 589
Score = 27.1 bits (57), Expect = 6.5
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 5/48 (10%)
Frame = -2
Query: 303 YEYLEAPFTIADSIYGSTFFMATGFHGLHVIIGTL----FL-LICFLR 175
++++ +P TI D I FF + H + + G+L FL +IC LR
Sbjct: 355 HKFVRSPLTIIDVISTGAFFFESLLHAILIQTGSLVTLDFLSMICVLR 402
>Z54307-8|CAD56577.1| 543|Caenorhabditis elegans Hypothetical
protein F14F11.1c protein.
Length = 543
Score = 27.1 bits (57), Expect = 6.5
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 5/48 (10%)
Frame = -2
Query: 303 YEYLEAPFTIADSIYGSTFFMATGFHGLHVIIGTL----FL-LICFLR 175
++++ +P TI D I FF + H + + G+L FL +IC LR
Sbjct: 309 HKFVRSPLTIIDVISTGAFFFESLLHAILIQTGSLVTLDFLSMICVLR 356
>Z54307-7|CAD56576.1| 589|Caenorhabditis elegans Hypothetical
protein F14F11.1b protein.
Length = 589
Score = 27.1 bits (57), Expect = 6.5
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 5/48 (10%)
Frame = -2
Query: 303 YEYLEAPFTIADSIYGSTFFMATGFHGLHVIIGTL----FL-LICFLR 175
++++ +P TI D I FF + H + + G+L FL +IC LR
Sbjct: 355 HKFVRSPLTIIDVISTGAFFFESLLHAILIQTGSLVTLDFLSMICVLR 402
>Z54307-5|CAD56575.1| 513|Caenorhabditis elegans Hypothetical
protein F14F11.1g protein.
Length = 513
Score = 27.1 bits (57), Expect = 6.5
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 5/48 (10%)
Frame = -2
Query: 303 YEYLEAPFTIADSIYGSTFFMATGFHGLHVIIGTL----FL-LICFLR 175
++++ +P TI D I FF + H + + G+L FL +IC LR
Sbjct: 279 HKFVRSPLTIIDVISTGAFFFESLLHAILIQTGSLVTLDFLSMICVLR 326
>Z54307-4|CAD56574.1| 510|Caenorhabditis elegans Hypothetical
protein F14F11.1f protein.
Length = 510
Score = 27.1 bits (57), Expect = 6.5
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 5/48 (10%)
Frame = -2
Query: 303 YEYLEAPFTIADSIYGSTFFMATGFHGLHVIIGTL----FL-LICFLR 175
++++ +P TI D I FF + H + + G+L FL +IC LR
Sbjct: 276 HKFVRSPLTIIDVISTGAFFFESLLHAILIQTGSLVTLDFLSMICVLR 323
>Z54307-3|CAD56573.1| 516|Caenorhabditis elegans Hypothetical
protein F14F11.1e protein.
Length = 516
Score = 27.1 bits (57), Expect = 6.5
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 5/48 (10%)
Frame = -2
Query: 303 YEYLEAPFTIADSIYGSTFFMATGFHGLHVIIGTL----FL-LICFLR 175
++++ +P TI D I FF + H + + G+L FL +IC LR
Sbjct: 282 HKFVRSPLTIIDVISTGAFFFESLLHAILIQTGSLVTLDFLSMICVLR 329
>Z54307-2|CAD56572.1| 503|Caenorhabditis elegans Hypothetical
protein F14F11.1d protein.
Length = 503
Score = 27.1 bits (57), Expect = 6.5
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 5/48 (10%)
Frame = -2
Query: 303 YEYLEAPFTIADSIYGSTFFMATGFHGLHVIIGTL----FL-LICFLR 175
++++ +P TI D I FF + H + + G+L FL +IC LR
Sbjct: 269 HKFVRSPLTIIDVISTGAFFFESLLHAILIQTGSLVTLDFLSMICVLR 316
>Z54307-1|CAA91092.2| 493|Caenorhabditis elegans Hypothetical
protein F14F11.1a protein.
Length = 493
Score = 27.1 bits (57), Expect = 6.5
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 5/48 (10%)
Frame = -2
Query: 303 YEYLEAPFTIADSIYGSTFFMATGFHGLHVIIGTL----FL-LICFLR 175
++++ +P TI D I FF + H + + G+L FL +IC LR
Sbjct: 259 HKFVRSPLTIIDVISTGAFFFESLLHAILIQTGSLVTLDFLSMICVLR 306
>AF068714-9|AAC17810.1| 87|Caenorhabditis elegans Hypothetical
protein B0348.1 protein.
Length = 87
Score = 26.6 bits (56), Expect = 8.6
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = -1
Query: 259 WINFFYGYWISWPSCNYW 206
WI FF G+++ +P C YW
Sbjct: 43 WIAFFIGFFLFFPIC-YW 59
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,310,463
Number of Sequences: 27780
Number of extensions: 113250
Number of successful extensions: 258
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 252
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 258
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 809909048
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -