Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_H19
(542 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 31 0.15
SPBC29A10.13 |atp7||F0-ATPase subunit D|Schizosaccharomyces pomb... 29 0.34
SPAC12G12.07c |||conserved fungal protein|Schizosaccharomyces po... 29 0.44
SPBC2F12.05c |||sterol binding ankyrin repeat protein|Schizosacc... 28 0.77
SPBC839.10 |usp107|snu71|U1 snRNP-associated protein Usp107|Schi... 28 0.77
SPAC24C9.03 |mvd1||diphosphomevalonate decarboxylase |Schizosacc... 27 1.4
SPBC1734.04 ||SPBC337.20|mannosyltransferase complex subunit, An... 27 1.8
SPBC1711.16 |||WD repeat protein Pwp1 |Schizosaccharomyces pombe... 27 2.4
SPBC365.20c ||SPBC557.06c|nicotinamidase |Schizosaccharomyces po... 26 3.1
SPAC26H5.12 |rpo41||mitochondrial DNA-directed RNA polymerase|Sc... 26 4.1
SPAC19A8.05c |vps27|sst4|sorting receptor for ubiquitinated memb... 25 5.5
SPAC32A11.02c |||conserved fungal protein|Schizosaccharomyces po... 25 7.2
SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78 |Schizosacch... 25 7.2
SPCC1393.05 |||sequence orphan|Schizosaccharomyces pombe|chr 3||... 25 7.2
SPBC19G7.04 |||HMG box protein |Schizosaccharomyces pombe|chr 2|... 25 9.5
SPAC4F10.18 |||WD repeat protein, human NUP37 family|Schizosacch... 25 9.5
SPAC25G10.01 ||SPAC2C4.18|RNA-binding protein|Schizosaccharomyce... 25 9.5
SPAC23G3.08c |ubp7||ubiquitin C-terminal hydrolase Ubp7|Schizosa... 25 9.5
SPAPB1A10.15 |||Arv1-like family protein|Schizosaccharomyces pom... 25 9.5
SPAC2E12.02 |hsf1|hstf, hsf|transcription factor Hsf1|Schizosacc... 25 9.5
SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyce... 25 9.5
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 25 9.5
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 30.7 bits (66), Expect = 0.15
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = +3
Query: 411 KAKEVLQQARQNLERTVEDLRKAHPDVEKQATALHEKLQTGIQN 542
K E Q + Q+L+R + + +K H E Q L +LQT I N
Sbjct: 504 KVSESTQSSLQSLQRDILNEKKKHEVYESQLNELKGELQTEISN 547
Score = 27.1 bits (57), Expect = 1.8
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
Frame = +2
Query: 230 DLEKHAQDFQKTISEQFNAI-VNSKNTESLNK---ALKEGSDSMVQQVSEVIQQSTGCVD 397
DL D +K++S+ N I V + +N LK+ DS+ Q SEV Q +D
Sbjct: 1176 DLANRLSDMKKSLSDSDNVISVIRSDLVRVNDELDTLKKDKDSLSTQYSEVCQDRDDLLD 1235
Query: 398 RRK 406
K
Sbjct: 1236 SLK 1238
>SPBC29A10.13 |atp7||F0-ATPase subunit D|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 175
Score = 29.5 bits (63), Expect = 0.34
Identities = 11/24 (45%), Positives = 19/24 (79%)
Frame = +3
Query: 426 LQQARQNLERTVEDLRKAHPDVEK 497
++QAR E T+ED+++A P++EK
Sbjct: 126 IEQARPTEEITIEDMKQAVPEIEK 149
>SPAC12G12.07c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 412
Score = 29.1 bits (62), Expect = 0.44
Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 6/68 (8%)
Frame = +2
Query: 191 AMVRRDAPNTILQDLEKHAQDFQKTI------SEQFNAIVNSKNTESLNKALKEGSDSMV 352
A+ +DA T L +L++ T QF A N+K E + +EG D+
Sbjct: 65 ALQGKDAVLTTLNELKELLSQIDATRIRDEKHKRQFEATENAKRKEEIEAQYREGYDTAQ 124
Query: 353 QQVSEVIQ 376
+QVS +++
Sbjct: 125 KQVSSLVR 132
>SPBC2F12.05c |||sterol binding ankyrin repeat
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1310
Score = 28.3 bits (60), Expect = 0.77
Identities = 30/115 (26%), Positives = 46/115 (40%), Gaps = 2/115 (1%)
Frame = +2
Query: 200 RRDAPNTILQDLEKHAQDFQK-TISEQFNAIVNSKNTESL-NKALKEGSDSMVQQVSEVI 373
RRD +I Q K ++ Q + + N ES+ +K EG + +Q S
Sbjct: 641 RRDNNGSIPSKQPSDEQHLGKESLPSQQSTVSNHHRKESIPSKQPTEGQHA--RQESLPS 698
Query: 374 QQSTGCVDRRKR*S*GSAPTSSPELGAHSRGSPQGAPRRRETSHRITREAANRHP 538
QQ+T RK S P+ P G H+R + + ET H ++ P
Sbjct: 699 QQTTETKHLRKE----STPSKQPTEGQHTRQESLPSQQTTETKHLRKESIPSKQP 749
Score = 26.2 bits (55), Expect = 3.1
Identities = 21/104 (20%), Positives = 42/104 (40%), Gaps = 1/104 (0%)
Frame = +2
Query: 230 DLEKHAQDFQKT-ISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSEVIQQSTGCVDRRK 406
+ +++ D +KT +++Q ++ + + + + + S QQST RK
Sbjct: 618 ETKQNIADIRKTTLTDQTEEFTERRDNNGSIPSKQPSDEQHLGKESLPSQQSTVSNHHRK 677
Query: 407 R*S*GSAPTSSPELGAHSRGSPQGAPRRRETSHRITREAANRHP 538
S P+ P G H+R + + ET H ++ P
Sbjct: 678 E----SIPSKQPTEGQHARQESLPSQQTTETKHLRKESTPSKQP 717
>SPBC839.10 |usp107|snu71|U1 snRNP-associated protein
Usp107|Schizosaccharomyces pombe|chr 2|||Manual
Length = 695
Score = 28.3 bits (60), Expect = 0.77
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
Frame = +3
Query: 402 ANGKAKEV--LQQARQNLERTVEDLRK--AHPDVEKQATALHEKLQTGIQN 542
A K KE+ LQQ R NLER +D+ +E+ A EK + +QN
Sbjct: 237 ARNKQKEINILQQIRFNLERICQDIGNFDVRSRIERAARQAREKNEKLLQN 287
>SPAC24C9.03 |mvd1||diphosphomevalonate decarboxylase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 393
Score = 27.5 bits (58), Expect = 1.4
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +3
Query: 405 NGKAKEVLQQARQNLERTVEDLRKAHPDVEKQ 500
NG A+E+ A + L VE+LRKA D+E++
Sbjct: 66 NGNAEEIF--ANKRLRVCVEELRKARLDLEEE 95
>SPBC1734.04 ||SPBC337.20|mannosyltransferase complex subunit, Anp
family |Schizosaccharomyces pombe|chr 2|||Manual
Length = 430
Score = 27.1 bits (57), Expect = 1.8
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 5/41 (12%)
Frame = +2
Query: 146 AKCFVLFACVALAHGAMVRRD-----APNTILQDLEKHAQD 253
A+ ++L A + H + RD APNTIL+DL +H +D
Sbjct: 201 ARNWLLSAAIQPYHSWVYWRDVDVETAPNTILEDLMRHDKD 241
>SPBC1711.16 |||WD repeat protein Pwp1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 516
Score = 26.6 bits (56), Expect = 2.4
Identities = 18/64 (28%), Positives = 30/64 (46%)
Frame = +3
Query: 339 PTPWCSRSPKLSNSLQGALTDANGKAKEVLQQARQNLERTVEDLRKAHPDVEKQATALHE 518
P + S PK + + N +K L+ AR +L+ ++ED KA+ + E+
Sbjct: 11 PRGYASEFPKSYDIDEIEYERINQLSKLKLEDARADLQSSMEDSNKANGNGEETTDGAEG 70
Query: 519 KLQT 530
LQT
Sbjct: 71 VLQT 74
>SPBC365.20c ||SPBC557.06c|nicotinamidase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 220
Score = 26.2 bits (55), Expect = 3.1
Identities = 14/53 (26%), Positives = 29/53 (54%)
Frame = +2
Query: 209 APNTILQDLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSE 367
A + +++ HA+ + T + V +TES N+A+K+ D+ ++ +SE
Sbjct: 159 ATDICVKETALHARHWYNTYI--ISEAVKGSSTESHNQAIKDFRDAKIEVISE 209
>SPAC26H5.12 |rpo41||mitochondrial DNA-directed RNA
polymerase|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1120
Score = 25.8 bits (54), Expect = 4.1
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +3
Query: 393 LTDANGKAKEVLQQARQN 446
LTD AKE+LQQAR N
Sbjct: 83 LTDVLSNAKELLQQARLN 100
>SPAC19A8.05c |vps27|sst4|sorting receptor for ubiquitinated
membrane proteins, ESCRT 0 complex|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 610
Score = 25.4 bits (53), Expect = 5.5
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -2
Query: 445 FWRACWSTSLALPFASVNAPCRLLDN 368
F C S +L+LP +N P R+ D+
Sbjct: 199 FCNQCSSKTLSLPHLGINQPVRVCDS 224
>SPAC32A11.02c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 851
Score = 25.0 bits (52), Expect = 7.2
Identities = 16/58 (27%), Positives = 22/58 (37%), Gaps = 1/58 (1%)
Frame = +2
Query: 176 ALAHGAM-VRRDAPNTILQDLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDS 346
+L GA V ++ I K DF K I FN + L A+ E S +
Sbjct: 46 SLTDGAKSVAKERQKKISDPARKFFSDFSKLIDNSFNVFAKKNEGDLLQNAIYELSQA 103
>SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 803
Score = 25.0 bits (52), Expect = 7.2
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +3
Query: 393 LTDANGKAKEVLQQARQNLERT 458
L D+ KAK L+QAR LERT
Sbjct: 401 LLDSIKKAKTELEQARIELERT 422
>SPCC1393.05 |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 956
Score = 25.0 bits (52), Expect = 7.2
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = +2
Query: 215 NTILQDLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKE 334
NT+ + + K +Q FQ S +FN + N ++K+L++
Sbjct: 487 NTVDEAITKQSQTFQLVNSNEFNEV----NANDVHKSLRQ 522
>SPBC19G7.04 |||HMG box protein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 362
Score = 24.6 bits (51), Expect = 9.5
Identities = 11/39 (28%), Positives = 19/39 (48%)
Frame = -3
Query: 303 FFELTIALNCSLIVFWKSWACFSRSCNIVLGASRRTIAP 187
+ E+T N + +K W C + CN + G ++I P
Sbjct: 247 YIEITSKHNYDIDFKYK-WLCINEKCNKLYGRHSKSINP 284
>SPAC4F10.18 |||WD repeat protein, human NUP37
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 391
Score = 24.6 bits (51), Expect = 9.5
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +3
Query: 342 TPWCSRSPKLSNSL 383
T WCS+SP SN L
Sbjct: 19 TTWCSQSPSCSNLL 32
>SPAC25G10.01 ||SPAC2C4.18|RNA-binding protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 297
Score = 24.6 bits (51), Expect = 9.5
Identities = 12/33 (36%), Positives = 13/33 (39%)
Frame = +1
Query: 103 NFASNSHRLRHRHGRQVLRVVRLRCPRSRSDGP 201
N S R RH HGR P R+D P
Sbjct: 248 NVDSRPRRERHFHGRSFAHAEHHSVPNMRNDTP 280
>SPAC23G3.08c |ubp7||ubiquitin C-terminal hydrolase
Ubp7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 875
Score = 24.6 bits (51), Expect = 9.5
Identities = 10/28 (35%), Positives = 12/28 (42%)
Frame = +2
Query: 89 CFYLATSLRTRTDSDTAMAAKCFVLFAC 172
CF T R D + + A C LF C
Sbjct: 83 CFICTTEKIKREDYELTLCANCGYLFCC 110
>SPAPB1A10.15 |||Arv1-like family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 220
Score = 24.6 bits (51), Expect = 9.5
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = -3
Query: 300 FELTIALNCSLIVFWKSWACFSRSCNIVLGASRRTI 193
+++++ L L + WKSW S S ++L +S R +
Sbjct: 139 YQISVVLLLCLTMGWKSWT--SASGAVILSSSTRML 172
>SPAC2E12.02 |hsf1|hstf, hsf|transcription factor
Hsf1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 609
Score = 24.6 bits (51), Expect = 9.5
Identities = 13/19 (68%), Positives = 13/19 (68%), Gaps = 2/19 (10%)
Frame = +2
Query: 428 PTSSP--ELGAHSRGSPQG 478
PT SP E AHSR SPQG
Sbjct: 255 PTVSPTNEPSAHSRPSPQG 273
>SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 681
Score = 24.6 bits (51), Expect = 9.5
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = -1
Query: 101 PGKNNAQHTHTHAQRERDTRYKSE 30
P KNN QH H + T KS+
Sbjct: 67 PSKNNIQHLHPNTSEPFKTSSKSD 90
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 24.6 bits (51), Expect = 9.5
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +3
Query: 459 VEDLRKAHPDVEKQATALHEKLQTGIQ 539
+ DL A PD++ + HE L G+Q
Sbjct: 353 IRDLCAAPPDLQLRCALRHELLSAGLQ 379
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,953,259
Number of Sequences: 5004
Number of extensions: 34183
Number of successful extensions: 183
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 172
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 183
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 223909422
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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