Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_H19
(542 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ109808-1|AAZ83370.1| 2479|Homo sapiens nephrocystin-6 protein. 31 2.0
BC043398-1|AAH43398.1| 805|Homo sapiens CEP290 protein protein. 31 2.0
AL646016-1|CAI17009.1| 1865|Homo sapiens formin 2 protein. 31 2.0
AL590490-1|CAH70931.1| 1865|Homo sapiens formin 2 protein. 31 2.0
AL513342-1|CAI17121.1| 1865|Homo sapiens formin 2 protein. 31 2.0
AL359918-2|CAI15796.1| 224|Homo sapiens formin 2 protein. 31 2.0
AL359918-1|CAI15795.1| 1865|Homo sapiens formin 2 protein. 31 2.0
AK023677-1|BAB14636.1| 574|Homo sapiens protein ( Homo sapiens ... 31 2.0
AF317887-1|AAK01919.1| 589|Homo sapiens monoclonal antibody 3H1... 31 2.0
AF218941-1|AAF72884.1| 335|Homo sapiens formin 2-like protein p... 31 2.0
AB209153-1|BAD92390.1| 1332|Homo sapiens formin 2 variant protein. 31 2.0
BC150265-1|AAI50266.1| 1481|Homo sapiens CRKRS protein protein. 31 3.4
AF227198-1|AAF36401.1| 1490|Homo sapiens CrkRS protein. 31 3.4
AB020711-1|BAA74927.2| 1535|Homo sapiens KIAA0904 protein protein. 31 3.4
BC089415-1|AAH89415.1| 446|Homo sapiens CEP110 protein protein. 30 4.6
AL137068-2|CAM13285.1| 2325|Homo sapiens centrosomal protein 110... 30 4.6
AL137068-1|CAI12355.1| 452|Homo sapiens centrosomal protein 110... 30 4.6
AK128098-1|BAC87273.1| 1185|Homo sapiens protein ( Homo sapiens ... 30 4.6
AF513978-1|AAP43846.1| 2325|Homo sapiens CENTRIOLIN protein. 30 4.6
BC130449-1|AAI30450.1| 1253|Homo sapiens PPP1R9A protein protein. 30 6.0
U82130-1|AAC52083.1| 390|Homo sapiens tumor susceptibility prot... 29 8.0
BC002487-1|AAH02487.1| 390|Homo sapiens tumor susceptibility ge... 29 8.0
>DQ109808-1|AAZ83370.1| 2479|Homo sapiens nephrocystin-6 protein.
Length = 2479
Score = 31.5 bits (68), Expect = 2.0
Identities = 13/42 (30%), Positives = 25/42 (59%)
Frame = +3
Query: 393 LTDANGKAKEVLQQARQNLERTVEDLRKAHPDVEKQATALHE 518
LT+AN K + Q+ R+NLE +V+++ K + + +H+
Sbjct: 225 LTEANEKIEVQNQEMRKNLEESVQEMEKMTDEYNRMKAIVHQ 266
>BC043398-1|AAH43398.1| 805|Homo sapiens CEP290 protein protein.
Length = 805
Score = 31.5 bits (68), Expect = 2.0
Identities = 13/42 (30%), Positives = 25/42 (59%)
Frame = +3
Query: 393 LTDANGKAKEVLQQARQNLERTVEDLRKAHPDVEKQATALHE 518
LT+AN K + Q+ R+NLE +V+++ K + + +H+
Sbjct: 225 LTEANEKIEVQNQEMRKNLEESVQEMEKMTDEYNRMKAIVHQ 266
>AL646016-1|CAI17009.1| 1865|Homo sapiens formin 2 protein.
Length = 1865
Score = 31.5 bits (68), Expect = 2.0
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Frame = +3
Query: 354 SRSP-KLSNSLQGALTDANGKAKEVLQQARQNLERTVEDLRKAHPDVEKQATALHEKLQT 530
S +P K S+++Q + D + + + Q LE+T+EDLR ++E+Q AL ++ +
Sbjct: 793 SETPQKRSDAVQKEVVDMKSEGQATVIQ---QLEQTIEDLRTKIAELERQYPALDTEVAS 849
Query: 531 GIQ 539
G Q
Sbjct: 850 GHQ 852
>AL590490-1|CAH70931.1| 1865|Homo sapiens formin 2 protein.
Length = 1865
Score = 31.5 bits (68), Expect = 2.0
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Frame = +3
Query: 354 SRSP-KLSNSLQGALTDANGKAKEVLQQARQNLERTVEDLRKAHPDVEKQATALHEKLQT 530
S +P K S+++Q + D + + + Q LE+T+EDLR ++E+Q AL ++ +
Sbjct: 793 SETPQKRSDAVQKEVVDMKSEGQATVIQ---QLEQTIEDLRTKIAELERQYPALDTEVAS 849
Query: 531 GIQ 539
G Q
Sbjct: 850 GHQ 852
>AL513342-1|CAI17121.1| 1865|Homo sapiens formin 2 protein.
Length = 1865
Score = 31.5 bits (68), Expect = 2.0
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Frame = +3
Query: 354 SRSP-KLSNSLQGALTDANGKAKEVLQQARQNLERTVEDLRKAHPDVEKQATALHEKLQT 530
S +P K S+++Q + D + + + Q LE+T+EDLR ++E+Q AL ++ +
Sbjct: 793 SETPQKRSDAVQKEVVDMKSEGQATVIQ---QLEQTIEDLRTKIAELERQYPALDTEVAS 849
Query: 531 GIQ 539
G Q
Sbjct: 850 GHQ 852
>AL359918-2|CAI15796.1| 224|Homo sapiens formin 2 protein.
Length = 224
Score = 31.5 bits (68), Expect = 2.0
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Frame = +3
Query: 354 SRSP-KLSNSLQGALTDANGKAKEVLQQARQNLERTVEDLRKAHPDVEKQATALHEKLQT 530
S +P K S+++Q + D + + + Q LE+T+EDLR ++E+Q AL ++ +
Sbjct: 83 SETPQKRSDAVQKEVVDMKSEGQATVIQ---QLEQTIEDLRTKIAELERQYPALDTEVAS 139
Query: 531 GIQ 539
G Q
Sbjct: 140 GHQ 142
>AL359918-1|CAI15795.1| 1865|Homo sapiens formin 2 protein.
Length = 1865
Score = 31.5 bits (68), Expect = 2.0
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Frame = +3
Query: 354 SRSP-KLSNSLQGALTDANGKAKEVLQQARQNLERTVEDLRKAHPDVEKQATALHEKLQT 530
S +P K S+++Q + D + + + Q LE+T+EDLR ++E+Q AL ++ +
Sbjct: 793 SETPQKRSDAVQKEVVDMKSEGQATVIQ---QLEQTIEDLRTKIAELERQYPALDTEVAS 849
Query: 531 GIQ 539
G Q
Sbjct: 850 GHQ 852
>AK023677-1|BAB14636.1| 574|Homo sapiens protein ( Homo sapiens
cDNA FLJ13615 fis, clone PLACE1010896, weakly similar to
NUF1 PROTEIN. ).
Length = 574
Score = 31.5 bits (68), Expect = 2.0
Identities = 13/42 (30%), Positives = 25/42 (59%)
Frame = +3
Query: 393 LTDANGKAKEVLQQARQNLERTVEDLRKAHPDVEKQATALHE 518
LT+AN K + Q+ R+NLE +V+++ K + + +H+
Sbjct: 225 LTEANEKIEVQNQEMRKNLEESVQEMEKMTDEYNRMKAIVHQ 266
>AF317887-1|AAK01919.1| 589|Homo sapiens monoclonal antibody 3H11
antigen protein.
Length = 589
Score = 31.5 bits (68), Expect = 2.0
Identities = 13/42 (30%), Positives = 25/42 (59%)
Frame = +3
Query: 393 LTDANGKAKEVLQQARQNLERTVEDLRKAHPDVEKQATALHE 518
LT+AN K + Q+ R+NLE +V+++ K + + +H+
Sbjct: 167 LTEANEKIEVQNQEMRKNLEESVQEMEKMTDEYNRMKAIVHQ 208
>AF218941-1|AAF72884.1| 335|Homo sapiens formin 2-like protein
protein.
Length = 335
Score = 31.5 bits (68), Expect = 2.0
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Frame = +3
Query: 354 SRSP-KLSNSLQGALTDANGKAKEVLQQARQNLERTVEDLRKAHPDVEKQATALHEKLQT 530
S +P K S+++Q + D + + + Q LE+T+EDLR ++E+Q AL ++ +
Sbjct: 255 SETPQKRSDAVQKEVVDMKSEGQATVIQ---QLEQTIEDLRTKIAELERQYPALDTEVAS 311
Query: 531 GIQ 539
G Q
Sbjct: 312 GHQ 314
>AB209153-1|BAD92390.1| 1332|Homo sapiens formin 2 variant protein.
Length = 1332
Score = 31.5 bits (68), Expect = 2.0
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Frame = +3
Query: 354 SRSP-KLSNSLQGALTDANGKAKEVLQQARQNLERTVEDLRKAHPDVEKQATALHEKLQT 530
S +P K S+++Q + D + + + Q LE+T+EDLR ++E+Q AL ++ +
Sbjct: 260 SETPQKRSDAVQKEVVDMKSEGQATVIQ---QLEQTIEDLRTKIAELERQYPALDTEVAS 316
Query: 531 GIQ 539
G Q
Sbjct: 317 GHQ 319
>BC150265-1|AAI50266.1| 1481|Homo sapiens CRKRS protein protein.
Length = 1481
Score = 30.7 bits (66), Expect = 3.4
Identities = 24/104 (23%), Positives = 46/104 (44%), Gaps = 3/104 (2%)
Frame = +2
Query: 200 RRDAPNTILQDLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSEV--- 370
R +P + L + +K++ + + S+++ S +K + S S +S V
Sbjct: 331 RSSSPFLSKRSLSRSPLPSRKSMKSRSRSPAYSRHSSSHSKKKRSSSRSRHSSISPVRLP 390
Query: 371 IQQSTGCVDRRKR*S*GSAPTSSPELGAHSRGSPQGAPRRRETS 502
+ S G RK+ +A ++ G S+GSP PR+ +S
Sbjct: 391 LNSSLGAELSRKKKERAAAAAAAKMDGKESKGSPVFLPRKENSS 434
>AF227198-1|AAF36401.1| 1490|Homo sapiens CrkRS protein.
Length = 1490
Score = 30.7 bits (66), Expect = 3.4
Identities = 24/104 (23%), Positives = 46/104 (44%), Gaps = 3/104 (2%)
Frame = +2
Query: 200 RRDAPNTILQDLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSEV--- 370
R +P + L + +K++ + + S+++ S +K + S S +S V
Sbjct: 331 RSSSPFLSKRSLSRSPLPSRKSMKSRSRSPAYSRHSSSHSKKKRSSSRSRHSSISPVRLP 390
Query: 371 IQQSTGCVDRRKR*S*GSAPTSSPELGAHSRGSPQGAPRRRETS 502
+ S G RK+ +A ++ G S+GSP PR+ +S
Sbjct: 391 LNSSLGAELSRKKKERAAAAAAAKMDGKESKGSPVFLPRKENSS 434
>AB020711-1|BAA74927.2| 1535|Homo sapiens KIAA0904 protein protein.
Length = 1535
Score = 30.7 bits (66), Expect = 3.4
Identities = 24/104 (23%), Positives = 46/104 (44%), Gaps = 3/104 (2%)
Frame = +2
Query: 200 RRDAPNTILQDLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSEV--- 370
R +P + L + +K++ + + S+++ S +K + S S +S V
Sbjct: 385 RSSSPFLSKRSLSRSPLPSRKSMKSRSRSPAYSRHSSSHSKKKRSSSRSRHSSISPVRLP 444
Query: 371 IQQSTGCVDRRKR*S*GSAPTSSPELGAHSRGSPQGAPRRRETS 502
+ S G RK+ +A ++ G S+GSP PR+ +S
Sbjct: 445 LNSSLGAELSRKKKERAAAAAAAKMDGKESKGSPVFLPRKENSS 488
>BC089415-1|AAH89415.1| 446|Homo sapiens CEP110 protein protein.
Length = 446
Score = 30.3 bits (65), Expect = 4.6
Identities = 17/46 (36%), Positives = 29/46 (63%)
Frame = +2
Query: 227 QDLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVS 364
+DLEK + ++ S+Q + KN + LNK+LKE ++M+Q+ S
Sbjct: 277 RDLEKKMIETEELKSKQTRFLEEIKNQDKLNKSLKE--EAMLQKQS 320
>AL137068-2|CAM13285.1| 2325|Homo sapiens centrosomal protein 110kDa
protein.
Length = 2325
Score = 30.3 bits (65), Expect = 4.6
Identities = 17/46 (36%), Positives = 29/46 (63%)
Frame = +2
Query: 227 QDLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVS 364
+DLEK + ++ S+Q + KN + LNK+LKE ++M+Q+ S
Sbjct: 277 RDLEKKMIETEELKSKQTRFLEEIKNQDKLNKSLKE--EAMLQKQS 320
>AL137068-1|CAI12355.1| 452|Homo sapiens centrosomal protein 110kDa
protein.
Length = 452
Score = 30.3 bits (65), Expect = 4.6
Identities = 17/46 (36%), Positives = 29/46 (63%)
Frame = +2
Query: 227 QDLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVS 364
+DLEK + ++ S+Q + KN + LNK+LKE ++M+Q+ S
Sbjct: 277 RDLEKKMIETEELKSKQTRFLEEIKNQDKLNKSLKE--EAMLQKQS 320
>AK128098-1|BAC87273.1| 1185|Homo sapiens protein ( Homo sapiens
cDNA FLJ46219 fis, clone TESTI4013742, moderately
similar to Mus musculus antigen identified by monoclonal
antibody ).
Length = 1185
Score = 30.3 bits (65), Expect = 4.6
Identities = 17/46 (36%), Positives = 29/46 (63%)
Frame = +2
Query: 227 QDLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVS 364
+DLEK + ++ S+Q + KN + LNK+LKE ++M+Q+ S
Sbjct: 110 RDLEKKMIETEELKSKQTRFLEEIKNQDKLNKSLKE--EAMLQKQS 153
>AF513978-1|AAP43846.1| 2325|Homo sapiens CENTRIOLIN protein.
Length = 2325
Score = 30.3 bits (65), Expect = 4.6
Identities = 17/46 (36%), Positives = 29/46 (63%)
Frame = +2
Query: 227 QDLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVS 364
+DLEK + ++ S+Q + KN + LNK+LKE ++M+Q+ S
Sbjct: 277 RDLEKKMIETEELKSKQTRFLEEIKNQDKLNKSLKE--EAMLQKQS 320
>BC130449-1|AAI30450.1| 1253|Homo sapiens PPP1R9A protein protein.
Length = 1253
Score = 29.9 bits (64), Expect = 6.0
Identities = 20/66 (30%), Positives = 35/66 (53%)
Frame = +3
Query: 342 TPWCSRSPKLSNSLQGALTDANGKAKEVLQQARQNLERTVEDLRKAHPDVEKQATALHEK 521
TP S+S LS+ +T + +A V+++ + ++ ++E RKA +EKQ L K
Sbjct: 1170 TPGLSQSLALSSDEALGMTASQDRA--VVKKKLKEMKMSLEKARKAQEKMEKQREKLRRK 1227
Query: 522 LQTGIQ 539
Q +Q
Sbjct: 1228 EQEQMQ 1233
>U82130-1|AAC52083.1| 390|Homo sapiens tumor susceptibility protein
protein.
Length = 390
Score = 29.5 bits (63), Expect = 8.0
Identities = 18/53 (33%), Positives = 31/53 (58%), Gaps = 4/53 (7%)
Frame = +3
Query: 378 SLQGALTDA-NGKAKEVLQQARQNL---ERTVEDLRKAHPDVEKQATALHEKL 524
SL A++D + KE + +A+ L +RT EDL+K H +E+ T L +++
Sbjct: 229 SLISAVSDKLRWRMKEEMDRAQAELNALKRTEEDLKKGHQKLEEMVTRLDQEV 281
>BC002487-1|AAH02487.1| 390|Homo sapiens tumor susceptibility gene
101 protein.
Length = 390
Score = 29.5 bits (63), Expect = 8.0
Identities = 18/53 (33%), Positives = 31/53 (58%), Gaps = 4/53 (7%)
Frame = +3
Query: 378 SLQGALTDA-NGKAKEVLQQARQNL---ERTVEDLRKAHPDVEKQATALHEKL 524
SL A++D + KE + +A+ L +RT EDL+K H +E+ T L +++
Sbjct: 229 SLISAVSDKLRWRMKEEMDRAQAELNALKRTEEDLKKGHQKLEEMVTRLDQEV 281
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,909,829
Number of Sequences: 237096
Number of extensions: 1305782
Number of successful extensions: 5370
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 4963
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5357
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5308067764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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