Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_H19
(542 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y12543-1|CAA73142.1| 897|Caenorhabditis elegans VPS34 homologue... 30 0.94
U55369-5|AAM29663.2| 1046|Caenorhabditis elegans Hypothetical pr... 30 0.94
U55369-4|AAM29662.1| 1022|Caenorhabditis elegans Hypothetical pr... 30 0.94
AF040657-1|AAB95054.1| 758|Caenorhabditis elegans Hypothetical ... 30 1.2
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 2.2
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 2.2
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 2.2
Z79755-3|CAB02108.1| 355|Caenorhabditis elegans Hypothetical pr... 29 2.9
U21321-11|AAG00044.1| 460|Caenorhabditis elegans Hypothetical p... 29 2.9
Z81494-10|CAN86581.1| 1507|Caenorhabditis elegans Hypothetical p... 28 3.8
Z81494-9|CAB04052.2| 1505|Caenorhabditis elegans Hypothetical pr... 28 3.8
U88181-2|AAB42303.1| 491|Caenorhabditis elegans Dnaj domain (pr... 28 3.8
AC024826-17|AAF60789.1| 662|Caenorhabditis elegans Hypothetical... 28 3.8
Z83114-4|CAB05554.4| 739|Caenorhabditis elegans Hypothetical pr... 27 6.6
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 27 8.7
Z70756-1|CAA94789.1| 1295|Caenorhabditis elegans Hypothetical pr... 27 8.7
U97190-7|AAF23185.1| 650|Caenorhabditis elegans Related to yeas... 27 8.7
U97190-6|AAV58893.1| 716|Caenorhabditis elegans Related to yeas... 27 8.7
U97190-5|AAV34807.1| 897|Caenorhabditis elegans Related to yeas... 27 8.7
U97190-4|AAV58894.1| 720|Caenorhabditis elegans Related to yeas... 27 8.7
U97190-3|AAF23184.1| 901|Caenorhabditis elegans Related to yeas... 27 8.7
U41038-5|AAK29710.4| 519|Caenorhabditis elegans Hypothetical pr... 27 8.7
>Y12543-1|CAA73142.1| 897|Caenorhabditis elegans VPS34 homologue
protein.
Length = 897
Score = 30.3 bits (65), Expect = 0.94
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Frame = +3
Query: 360 SPKLSNSLQGALT---DANGKAKEVLQQARQNLERTVEDLRKAHPDVEKQATALHEK 521
SPK+SN L L ++ ++KE + QN++ + D PD Q +LH++
Sbjct: 488 SPKVSNYLYWHLKTEIESTKESKEAHSKMYQNIQHRLMDALVKRPDTRAQVDSLHQQ 544
>U55369-5|AAM29663.2| 1046|Caenorhabditis elegans Hypothetical
protein C18C4.5b protein.
Length = 1046
Score = 30.3 bits (65), Expect = 0.94
Identities = 12/49 (24%), Positives = 28/49 (57%)
Frame = +2
Query: 224 LQDLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSEV 370
++DL+K F + ++ + I K+ S+N ++ DS+ +++SE+
Sbjct: 153 VEDLQKQVSSFMSQMQDKNSEIQKMKDAISVNDVSRQNMDSLSEKLSEM 201
>U55369-4|AAM29662.1| 1022|Caenorhabditis elegans Hypothetical
protein C18C4.5a protein.
Length = 1022
Score = 30.3 bits (65), Expect = 0.94
Identities = 12/49 (24%), Positives = 28/49 (57%)
Frame = +2
Query: 224 LQDLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSEV 370
++DL+K F + ++ + I K+ S+N ++ DS+ +++SE+
Sbjct: 153 VEDLQKQVSSFMSQMQDKNSEIQKMKDAISVNDVSRQNMDSLSEKLSEM 201
>AF040657-1|AAB95054.1| 758|Caenorhabditis elegans Hypothetical
protein T20H9.6 protein.
Length = 758
Score = 29.9 bits (64), Expect = 1.2
Identities = 12/39 (30%), Positives = 24/39 (61%)
Frame = +3
Query: 408 GKAKEVLQQARQNLERTVEDLRKAHPDVEKQATALHEKL 524
GKA + L+ + N++ + E +R+ D+ K+ T +H K+
Sbjct: 359 GKALQTLKTVQTNVQDSNESIRRGENDMLKEITDVHSKV 397
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.1 bits (62), Expect = 2.2
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +2
Query: 383 TGCVDRRKR*S*GSAPTSSPELGAHSRGSP-QGAPRRRETS 502
TG R+KR + PT SP G+ G P +G P + E+S
Sbjct: 438 TGLPSRQKRQAPEDRPTGSPPTGSPPTGRPHRGGPGKSESS 478
Score = 24.2 bits (50), Expect(2) = 7.4
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 419 GSAPTSSPELGAHSRGSP 472
GS PT SP G RG P
Sbjct: 347 GSPPTGSPPTGRPPRGGP 364
Score = 21.4 bits (43), Expect(2) = 7.4
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = +2
Query: 461 RGSPQGAPRRRETSHRITRE 520
RG P+G PR+ +RE
Sbjct: 383 RGGPRGGPRKSSEESSESRE 402
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.1 bits (62), Expect = 2.2
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +2
Query: 383 TGCVDRRKR*S*GSAPTSSPELGAHSRGSP-QGAPRRRETS 502
TG R+KR + PT SP G+ G P +G P + E+S
Sbjct: 459 TGLPSRQKRQAPEDRPTGSPPTGSPPTGRPHRGGPGKSESS 499
Score = 24.2 bits (50), Expect(2) = 7.4
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 419 GSAPTSSPELGAHSRGSP 472
GS PT SP G RG P
Sbjct: 368 GSPPTGSPPTGRPPRGGP 385
Score = 21.4 bits (43), Expect(2) = 7.4
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = +2
Query: 461 RGSPQGAPRRRETSHRITRE 520
RG P+G PR+ +RE
Sbjct: 404 RGGPRGGPRKSSEESSESRE 423
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.1 bits (62), Expect = 2.2
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +2
Query: 383 TGCVDRRKR*S*GSAPTSSPELGAHSRGSP-QGAPRRRETS 502
TG R+KR + PT SP G+ G P +G P + E+S
Sbjct: 444 TGLPSRQKRQAPEDRPTGSPPTGSPPTGRPHRGGPGKSESS 484
Score = 24.2 bits (50), Expect(2) = 7.4
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 419 GSAPTSSPELGAHSRGSP 472
GS PT SP G RG P
Sbjct: 353 GSPPTGSPPTGRPPRGGP 370
Score = 21.4 bits (43), Expect(2) = 7.4
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = +2
Query: 461 RGSPQGAPRRRETSHRITRE 520
RG P+G PR+ +RE
Sbjct: 389 RGGPRGGPRKSSEESSESRE 408
>Z79755-3|CAB02108.1| 355|Caenorhabditis elegans Hypothetical
protein F43G9.4 protein.
Length = 355
Score = 28.7 bits (61), Expect = 2.9
Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 1/83 (1%)
Frame = +2
Query: 164 FACVA-LAHGAMVRRDAPNTILQDLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGS 340
F+C L + + P DL+K + + +S N N +SL +A GS
Sbjct: 59 FSCAPKLTYALVTTEPLPENANSDLKKAHRAACEYLSS--NGKTRGSNIQSLGEAAG-GS 115
Query: 341 DSMVQQVSEVIQQSTGCVDRRKR 409
+ M + EV + TG ++RK+
Sbjct: 116 EKMKKMNGEVTKNKTGKPEKRKK 138
>U21321-11|AAG00044.1| 460|Caenorhabditis elegans Hypothetical
protein ZK177.1 protein.
Length = 460
Score = 28.7 bits (61), Expect = 2.9
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = -2
Query: 448 KFWRACWSTSLALPFASVNAPCRLLDNFG 362
K + + ++TS+ F S+ PCRLL +FG
Sbjct: 23 KLFESVFNTSILHSFFSLYTPCRLLRSFG 51
>Z81494-10|CAN86581.1| 1507|Caenorhabditis elegans Hypothetical
protein F02E9.4b protein.
Length = 1507
Score = 28.3 bits (60), Expect = 3.8
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +2
Query: 428 PTSSPELGAHSRGSPQGAPRRRETSHRITREAANRHPE 541
P+ P + A S G PQ PR+++ R R + PE
Sbjct: 244 PSVPPVVPATSAGCPQREPRQQQGGRRQNRPGRRKKPE 281
>Z81494-9|CAB04052.2| 1505|Caenorhabditis elegans Hypothetical
protein F02E9.4a protein.
Length = 1505
Score = 28.3 bits (60), Expect = 3.8
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +2
Query: 428 PTSSPELGAHSRGSPQGAPRRRETSHRITREAANRHPE 541
P+ P + A S G PQ PR+++ R R + PE
Sbjct: 244 PSVPPVVPATSAGCPQREPRQQQGGRRQNRPGRRKKPE 281
>U88181-2|AAB42303.1| 491|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 7 protein.
Length = 491
Score = 28.3 bits (60), Expect = 3.8
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = +1
Query: 301 EHGELEQSTEGRLRLHGAAGLRSYPTVYRVR*PTQTVKLRKCSNKLARTW 450
+H E ++ E RL AG R Y + V+ ++ K KLA+ W
Sbjct: 357 DHREAKEGLEHAKRLKTQAGKRDYYKILGVKRNASKREITKAYRKLAQKW 406
>AC024826-17|AAF60789.1| 662|Caenorhabditis elegans Hypothetical
protein Y55F3AM.14 protein.
Length = 662
Score = 28.3 bits (60), Expect = 3.8
Identities = 26/96 (27%), Positives = 44/96 (45%), Gaps = 3/96 (3%)
Frame = +2
Query: 215 NTILQDLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSEVIQQSTGCV 394
NT L D + H +D ++ E++ + + E ++ L+E +S S ++ +
Sbjct: 12 NTTLPD-DIHMKDPEEEEFEEYEDELLEEE-EEFDEELEELENS--DSASSLVSAGSPHG 67
Query: 395 DRRKR*S*GSAP---TSSPELGAHSRGSPQGAPRRR 493
S GS+P SP G+ S GSP G P +R
Sbjct: 68 SSSSNGSHGSSPPLQVQSPSQGSGSSGSPTGQPEKR 103
>Z83114-4|CAB05554.4| 739|Caenorhabditis elegans Hypothetical
protein K09B11.10 protein.
Length = 739
Score = 27.5 bits (58), Expect = 6.6
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = +2
Query: 83 VHCFYLATSLRTRTDSDTAMAAK-CFVLFACVALAHGAMVRRDAPNTILQDLEKHAQDFQ 259
+ C TSL + T A+ C V +AL+ + D+P I DL+ +AQ F+
Sbjct: 327 IPCSQRTTSLSLKYWMKTGTQAEICAVDEDGIALSCAYLEPNDSPGPITIDLDSYAQPFK 386
Query: 260 KTI 268
T+
Sbjct: 387 FTV 389
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 27.1 bits (57), Expect = 8.7
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = +2
Query: 425 APTSSPELGAHSRGSPQGAPRRRETSHRITREAANRHP 538
+P+ S R SP APRRR++ R R P
Sbjct: 469 SPSGSKSRSPRRRRSPAAAPRRRQSPQRRRSPRRRRSP 506
>Z70756-1|CAA94789.1| 1295|Caenorhabditis elegans Hypothetical
protein T06E4.1 protein.
Length = 1295
Score = 27.1 bits (57), Expect = 8.7
Identities = 14/57 (24%), Positives = 30/57 (52%)
Frame = +3
Query: 372 SNSLQGALTDANGKAKEVLQQARQNLERTVEDLRKAHPDVEKQATALHEKLQTGIQN 542
S + ++ DA + K+ L + L+ +ED K+ D+++ + ++LQ +QN
Sbjct: 794 SQEVSRSVVDAAVQEKDGLLRLVDTLKLKIEDTEKSAQDLQQSSVEEIKQLQLDLQN 850
>U97190-7|AAF23185.1| 650|Caenorhabditis elegans Related to yeast
vacuolar proteinsorting factor protein 34, isoform b
protein.
Length = 650
Score = 27.1 bits (57), Expect = 8.7
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Frame = +3
Query: 360 SPKLSNSLQGALT---DANGKAKEVLQQARQNLERTVEDLRKAHPDVEKQATALHEK 521
SPK+SN L L ++ ++KE + QN++ + + PD Q +LH++
Sbjct: 241 SPKVSNYLYWHLKTEIESTKESKEEHSKMYQNIQDRLMEALVKRPDTRAQVDSLHQQ 297
>U97190-6|AAV58893.1| 716|Caenorhabditis elegans Related to yeast
vacuolar proteinsorting factor protein 34, isoform d
protein.
Length = 716
Score = 27.1 bits (57), Expect = 8.7
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Frame = +3
Query: 360 SPKLSNSLQGALT---DANGKAKEVLQQARQNLERTVEDLRKAHPDVEKQATALHEK 521
SPK+SN L L ++ ++KE + QN++ + + PD Q +LH++
Sbjct: 488 SPKVSNYLYWHLKTEIESTKESKEEHSKMYQNIQDRLMEALVKRPDTRAQVDSLHQQ 544
>U97190-5|AAV34807.1| 897|Caenorhabditis elegans Related to yeast
vacuolar proteinsorting factor protein 34, isoform c
protein.
Length = 897
Score = 27.1 bits (57), Expect = 8.7
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Frame = +3
Query: 360 SPKLSNSLQGALT---DANGKAKEVLQQARQNLERTVEDLRKAHPDVEKQATALHEK 521
SPK+SN L L ++ ++KE + QN++ + + PD Q +LH++
Sbjct: 488 SPKVSNYLYWHLKTEIESTKESKEEHSKMYQNIQDRLMEALVKRPDTRAQVDSLHQQ 544
>U97190-4|AAV58894.1| 720|Caenorhabditis elegans Related to yeast
vacuolar proteinsorting factor protein 34, isoform e
protein.
Length = 720
Score = 27.1 bits (57), Expect = 8.7
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Frame = +3
Query: 360 SPKLSNSLQGALT---DANGKAKEVLQQARQNLERTVEDLRKAHPDVEKQATALHEK 521
SPK+SN L L ++ ++KE + QN++ + + PD Q +LH++
Sbjct: 492 SPKVSNYLYWHLKTEIESTKESKEEHSKMYQNIQDRLMEALVKRPDTRAQVDSLHQQ 548
>U97190-3|AAF23184.1| 901|Caenorhabditis elegans Related to yeast
vacuolar proteinsorting factor protein 34, isoform a
protein.
Length = 901
Score = 27.1 bits (57), Expect = 8.7
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Frame = +3
Query: 360 SPKLSNSLQGALT---DANGKAKEVLQQARQNLERTVEDLRKAHPDVEKQATALHEK 521
SPK+SN L L ++ ++KE + QN++ + + PD Q +LH++
Sbjct: 492 SPKVSNYLYWHLKTEIESTKESKEEHSKMYQNIQDRLMEALVKRPDTRAQVDSLHQQ 548
>U41038-5|AAK29710.4| 519|Caenorhabditis elegans Hypothetical
protein F59C12.3 protein.
Length = 519
Score = 27.1 bits (57), Expect = 8.7
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = +3
Query: 441 QNLERTVEDLRKAHPDVEKQ 500
Q LER V DLRK H D +Q
Sbjct: 367 QQLERMVNDLRKTHGDKTEQ 386
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,257,585
Number of Sequences: 27780
Number of extensions: 211257
Number of successful extensions: 932
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 885
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 926
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1091917214
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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