Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0014_H18
         (488 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-3487|AAF46914.1|  140|Drosophila melanogaster CG3661-PA...   263   1e-70
M85295-1|AAA28867.1|  140|Drosophila melanogaster ribosomal prot...   248   2e-66
BT030159-1|ABN49298.1|  363|Drosophila melanogaster IP17715p pro...    31   0.85 
AE013599-2351|AAF57949.1|  366|Drosophila melanogaster CG15615-P...    31   0.85 
U43733-1|AAA86639.1|  904|Drosophila melanogaster Abrupt protein.      30   2.0  
BT003807-1|AAO41490.1|  369|Drosophila melanogaster AT11330p pro...    30   2.0  
BT001583-1|AAN71338.1|  894|Drosophila melanogaster RE25924p pro...    30   2.0  
AE014134-2051|AAN10774.1|  894|Drosophila melanogaster CG4807-PB...    30   2.0  
AE014134-2050|AAF53087.2|  904|Drosophila melanogaster CG4807-PA...    30   2.0  
Z11527-1|CAA77616.1|  614|Drosophila melanogaster CYS3HIS finger...    29   3.4  
BT021256-1|AAX33404.1|  608|Drosophila melanogaster RE58038p pro...    29   3.4  
AE014297-3282|AAO41594.1|  599|Drosophila melanogaster CG4620-PB...    29   3.4  
AE014297-3281|AAO41593.1|  599|Drosophila melanogaster CG4620-PA...    29   3.4  
AY051587-1|AAK93011.1|  523|Drosophila melanogaster GH23377p pro...    28   7.9  
AE014134-2961|AAF53691.1|  784|Drosophila melanogaster CG10383-P...    28   7.9  

>AE013599-3487|AAF46914.1|  140|Drosophila melanogaster CG3661-PA
           protein.
          Length = 140

 Score =  263 bits (644), Expect = 1e-70
 Identities = 124/131 (94%), Positives = 127/131 (96%)
 Frame = +1

Query: 31  MSKRGRGGSAGAKFRISLGLPVGAVINCADNTGAKNLYVIAVQGIKGRLNRLPAAGSGDM 210
           MSKRGRGG+AG KFRISLGLPVGAV+NCADNTGAKNLYVIAV GI+GRLNRLPAAG GDM
Sbjct: 1   MSKRGRGGTAGGKFRISLGLPVGAVMNCADNTGAKNLYVIAVHGIRGRLNRLPAAGVGDM 60

Query: 211 IVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGP 390
            VATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGP
Sbjct: 61  FVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGP 120

Query: 391 VAKECADLWPR 423
           VAKECADLWPR
Sbjct: 121 VAKECADLWPR 131


>M85295-1|AAA28867.1|  140|Drosophila melanogaster ribosomal protein
           L17A protein.
          Length = 140

 Score =  248 bits (608), Expect = 2e-66
 Identities = 118/131 (90%), Positives = 121/131 (92%)
 Frame = +1

Query: 31  MSKRGRGGSAGAKFRISLGLPVGAVINCADNTGAKNLYVIAVQGIKGRLNRLPAAGSGDM 210
           MSKRGRGG+AG KFRISLGLPVGAV+NCADNTGAKNLYVIAV GI+GRLNRLPAAG GDM
Sbjct: 1   MSKRGRGGTAGGKFRISLGLPVGAVMNCADNTGAKNLYVIAVHGIRGRLNRLPAAGVGDM 60

Query: 211 IVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGP 390
            VATVKKGKPELRKKV      RQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGP
Sbjct: 61  FVATVKKGKPELRKKVSVVPSARQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGP 120

Query: 391 VAKECADLWPR 423
           VAKECADLWPR
Sbjct: 121 VAKECADLWPR 131


>BT030159-1|ABN49298.1|  363|Drosophila melanogaster IP17715p
           protein.
          Length = 363

 Score = 31.1 bits (67), Expect = 0.85
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = -3

Query: 309 PVPPSKWFPLPDHHCWHY 256
           PV  S+WFP PDHH  H+
Sbjct: 266 PVVISEWFPSPDHHDHHH 283


>AE013599-2351|AAF57949.1|  366|Drosophila melanogaster CG15615-PA
           protein.
          Length = 366

 Score = 31.1 bits (67), Expect = 0.85
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = -3

Query: 309 PVPPSKWFPLPDHHCWHY 256
           PV  S+WFP PDHH  H+
Sbjct: 269 PVVISEWFPSPDHHDHHH 286


>U43733-1|AAA86639.1|  904|Drosophila melanogaster Abrupt protein.
          Length = 904

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 26/59 (44%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
 Frame = -1

Query: 335 ALSSKYMNTPSRLLNG-FRCLITTAGITFFLSSGLPFLTVATIMSPEPAAGNLF-RRPL 165
           A+     N P  LL G F      AG   F  SG P LT+  IM  E AAGNL   RPL
Sbjct: 785 AMGHSLDNLPPGLLPGQFDLSKLAAGNPAFGQSG-PGLTIEPIMRHEQAAGNLSPNRPL 842


>BT003807-1|AAO41490.1|  369|Drosophila melanogaster AT11330p
           protein.
          Length = 369

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 26/59 (44%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
 Frame = -1

Query: 335 ALSSKYMNTPSRLLNG-FRCLITTAGITFFLSSGLPFLTVATIMSPEPAAGNLF-RRPL 165
           A+     N P  LL G F      AG   F  SG P LT+  IM  E AAGNL   RPL
Sbjct: 250 AMGHSLDNLPPGLLPGQFDLSKLAAGNPAFGQSG-PGLTIEPIMRHEQAAGNLSPNRPL 307


>BT001583-1|AAN71338.1|  894|Drosophila melanogaster RE25924p
           protein.
          Length = 894

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 26/59 (44%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
 Frame = -1

Query: 335 ALSSKYMNTPSRLLNG-FRCLITTAGITFFLSSGLPFLTVATIMSPEPAAGNLF-RRPL 165
           A+     N P  LL G F      AG   F  SG P LT+  IM  E AAGNL   RPL
Sbjct: 775 AMGHSLDNLPPGLLPGQFDLSKLAAGNPAFGQSG-PGLTIEPIMRHEQAAGNLSPNRPL 832


>AE014134-2051|AAN10774.1|  894|Drosophila melanogaster CG4807-PB,
           isoform B protein.
          Length = 894

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 26/59 (44%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
 Frame = -1

Query: 335 ALSSKYMNTPSRLLNG-FRCLITTAGITFFLSSGLPFLTVATIMSPEPAAGNLF-RRPL 165
           A+     N P  LL G F      AG   F  SG P LT+  IM  E AAGNL   RPL
Sbjct: 775 AMGHSLDNLPPGLLPGQFDLSKLAAGNPAFGQSG-PGLTIEPIMRHEQAAGNLSPNRPL 832


>AE014134-2050|AAF53087.2|  904|Drosophila melanogaster CG4807-PA,
           isoform A protein.
          Length = 904

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 26/59 (44%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
 Frame = -1

Query: 335 ALSSKYMNTPSRLLNG-FRCLITTAGITFFLSSGLPFLTVATIMSPEPAAGNLF-RRPL 165
           A+     N P  LL G F      AG   F  SG P LT+  IM  E AAGNL   RPL
Sbjct: 785 AMGHSLDNLPPGLLPGQFDLSKLAAGNPAFGQSG-PGLTIEPIMRHEQAAGNLSPNRPL 842


>Z11527-1|CAA77616.1|  614|Drosophila melanogaster CYS3HIS finger
           protein protein.
          Length = 614

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = +1

Query: 277 RQRKPFRRRDGVFIYFEDN 333
           R+R+P R+RDG F Y  DN
Sbjct: 72  RRRRPVRKRDGTFNYSADN 90


>BT021256-1|AAX33404.1|  608|Drosophila melanogaster RE58038p
           protein.
          Length = 608

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = +1

Query: 277 RQRKPFRRRDGVFIYFEDN 333
           R+R+P R+RDG F Y  DN
Sbjct: 66  RRRRPVRKRDGTFNYSADN 84


>AE014297-3282|AAO41594.1|  599|Drosophila melanogaster CG4620-PB,
           isoform B protein.
          Length = 599

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = +1

Query: 277 RQRKPFRRRDGVFIYFEDN 333
           R+R+P R+RDG F Y  DN
Sbjct: 57  RRRRPVRKRDGTFNYSADN 75


>AE014297-3281|AAO41593.1|  599|Drosophila melanogaster CG4620-PA,
           isoform A protein.
          Length = 599

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = +1

Query: 277 RQRKPFRRRDGVFIYFEDN 333
           R+R+P R+RDG F Y  DN
Sbjct: 57  RRRRPVRKRDGTFNYSADN 75


>AY051587-1|AAK93011.1|  523|Drosophila melanogaster GH23377p
           protein.
          Length = 523

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +3

Query: 132 KKSVCDCRTRYQGSSEQVTSCW 197
           K SVC    R Q +SE+ T+CW
Sbjct: 226 KFSVCGSEWRNQDTSEEYTNCW 247


>AE014134-2961|AAF53691.1|  784|Drosophila melanogaster CG10383-PA
           protein.
          Length = 784

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +3

Query: 132 KKSVCDCRTRYQGSSEQVTSCW 197
           K SVC    R Q +SE+ T+CW
Sbjct: 487 KFSVCGSEWRNQDTSEEYTNCW 508


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,112,104
Number of Sequences: 53049
Number of extensions: 577871
Number of successful extensions: 2125
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 2062
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2125
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1726192251
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)