Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_H17
(422 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 33 0.11
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 33 0.11
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 33 0.11
AL031633-14|CAA21032.1| 903|Caenorhabditis elegans Hypothetical... 32 0.19
AL031633-13|CAA21027.1| 951|Caenorhabditis elegans Hypothetical... 32 0.19
AL031633-12|CAA21026.2| 1107|Caenorhabditis elegans Hypothetical... 32 0.19
AJ132701-1|CAA10737.1| 1107|Caenorhabditis elegans centaurin gam... 32 0.19
AJ132700-1|CAA10736.1| 952|Caenorhabditis elegans centaurin gam... 32 0.19
Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical pr... 31 0.26
AC006674-2|AAF39941.2| 437|Caenorhabditis elegans Hypothetical ... 30 0.59
AC006692-9|AAF39972.5| 1493|Caenorhabditis elegans Drosophila so... 30 0.79
Z34533-1|CAA84302.3| 730|Caenorhabditis elegans Hypothetical pr... 29 1.0
Z29561-4|CAD91697.1| 498|Caenorhabditis elegans Hypothetical pr... 29 1.0
Z29561-2|CAD54152.1| 882|Caenorhabditis elegans Hypothetical pr... 29 1.0
Z29561-1|CAA82667.2| 861|Caenorhabditis elegans Hypothetical pr... 29 1.0
U73679-1|AAC67305.1| 861|Caenorhabditis elegans YNK1-a protein. 29 1.0
Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical pr... 29 1.4
Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical pr... 29 1.4
AC084158-11|AAK68558.1| 555|Caenorhabditis elegans Hypothetical... 29 1.4
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 1.8
U93842-1|AAB52421.1| 1409|Caenorhabditis elegans regulator of pr... 29 1.8
U49945-3|AAM51509.1| 1408|Caenorhabditis elegans Aboc, expulsion... 29 1.8
U49945-2|AAC47926.1| 1409|Caenorhabditis elegans Aboc, expulsion... 29 1.8
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 1.8
U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical pr... 28 2.4
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 28 2.4
Z68011-3|CAA92014.2| 821|Caenorhabditis elegans Hypothetical pr... 28 3.2
AL032625-4|CAB63350.2| 792|Caenorhabditis elegans Hypothetical ... 28 3.2
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 28 3.2
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 28 3.2
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 28 3.2
AC025716-21|AAT39978.1| 586|Caenorhabditis elegans Hypothetical... 28 3.2
AC025716-20|AAT39977.2| 946|Caenorhabditis elegans Hypothetical... 28 3.2
AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical ... 28 3.2
Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical pr... 27 4.2
Z81056-1|CAB02902.1| 319|Caenorhabditis elegans Hypothetical pr... 27 4.2
Z80214-5|CAJ76929.1| 916|Caenorhabditis elegans Hypothetical pr... 27 4.2
Z80214-4|CAB02263.1| 982|Caenorhabditis elegans Hypothetical pr... 27 4.2
U61949-6|AAB03154.1| 166|Caenorhabditis elegans Hypothetical pr... 27 4.2
AC006790-10|AAF60736.1| 371|Caenorhabditis elegans Collagen pro... 27 4.2
Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical pr... 27 5.5
U58748-10|AAB52970.2| 701|Caenorhabditis elegans Hypothetical p... 27 5.5
U50135-6|AAN63429.1| 925|Caenorhabditis elegans Hypothetical pr... 27 5.5
AL132949-22|CAB70112.2| 603|Caenorhabditis elegans Hypothetical... 27 5.5
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 27 7.3
U59212-1|AAB09671.1| 428|Caenorhabditis elegans transmembrane p... 27 7.3
U41007-13|AAA82271.2| 307|Caenorhabditis elegans (s. pombe chro... 27 7.3
U39677-5|AAN71843.1| 383|Caenorhabditis elegans Innexin protein... 27 7.3
U39677-4|AAN71842.1| 428|Caenorhabditis elegans Innexin protein... 27 7.3
U21308-15|AAB93316.2| 412|Caenorhabditis elegans Hypothetical p... 27 7.3
AF039050-10|AAC47933.2| 362|Caenorhabditis elegans Seven tm rec... 27 7.3
Z70309-6|CAA94360.1| 324|Caenorhabditis elegans Hypothetical pr... 26 9.7
Z46791-5|CAA86755.2| 948|Caenorhabditis elegans Hypothetical pr... 26 9.7
U56965-10|AAB52670.1| 1041|Caenorhabditis elegans Nicotinamide n... 26 9.7
U21308-2|AAB93313.3| 507|Caenorhabditis elegans Hypothetical pr... 26 9.7
AL031635-6|CAA21044.1| 761|Caenorhabditis elegans Hypothetical ... 26 9.7
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 32.7 bits (71), Expect = 0.11
Identities = 18/48 (37%), Positives = 22/48 (45%), Gaps = 6/48 (12%)
Frame = -3
Query: 138 LPSTGTLQRAPPLLAPTAG------SRRAHRPPPRTPCGNRAPPSTPP 13
+P T + +APP P G + A PPP P G APP PP
Sbjct: 205 VPLTSNIPQAPPAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPP 252
Score = 29.9 bits (64), Expect = 0.79
Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 5/50 (10%)
Frame = -3
Query: 147 LSSLPSTGTLQ--RAPPLLAPTAGSRRAHRPPPRTPCGN---RAPPSTPP 13
LSS + T Q RA + +AGS H PPP P + +APP+ PP
Sbjct: 171 LSSTAAALTQQQRRASQSSSTSAGSSIPHAPPPPVPLTSNIPQAPPAPPP 220
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 32.7 bits (71), Expect = 0.11
Identities = 18/48 (37%), Positives = 22/48 (45%), Gaps = 6/48 (12%)
Frame = -3
Query: 138 LPSTGTLQRAPPLLAPTAG------SRRAHRPPPRTPCGNRAPPSTPP 13
+P T + +APP P G + A PPP P G APP PP
Sbjct: 191 VPLTSNIPQAPPAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPP 238
Score = 29.9 bits (64), Expect = 0.79
Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 5/50 (10%)
Frame = -3
Query: 147 LSSLPSTGTLQ--RAPPLLAPTAGSRRAHRPPPRTPCGN---RAPPSTPP 13
LSS + T Q RA + +AGS H PPP P + +APP+ PP
Sbjct: 157 LSSTAAALTQQQRRASQSSSTSAGSSIPHAPPPPVPLTSNIPQAPPAPPP 206
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 32.7 bits (71), Expect = 0.11
Identities = 18/48 (37%), Positives = 22/48 (45%), Gaps = 6/48 (12%)
Frame = -3
Query: 138 LPSTGTLQRAPPLLAPTAG------SRRAHRPPPRTPCGNRAPPSTPP 13
+P T + +APP P G + A PPP P G APP PP
Sbjct: 191 VPLTSNIPQAPPAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPP 238
Score = 29.9 bits (64), Expect = 0.79
Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 5/50 (10%)
Frame = -3
Query: 147 LSSLPSTGTLQ--RAPPLLAPTAGSRRAHRPPPRTPCGN---RAPPSTPP 13
LSS + T Q RA + +AGS H PPP P + +APP+ PP
Sbjct: 157 LSSTAAALTQQQRRASQSSSTSAGSSIPHAPPPPVPLTSNIPQAPPAPPP 206
>AL031633-14|CAA21032.1| 903|Caenorhabditis elegans Hypothetical
protein Y39A1A.15c protein.
Length = 903
Score = 31.9 bits (69), Expect = 0.19
Identities = 19/50 (38%), Positives = 22/50 (44%)
Frame = -3
Query: 153 HHLSSLPSTGTLQRAPPLLAPTAGSRRAHRPPPRTPCGNRAPPSTPPCAS 4
HH P Q+ PP + TA S R+ TP GNR P P AS
Sbjct: 257 HHRGEHPQQQQYQQQPPSSSRTA-SERSMSAMLGTPYGNRMPAGVSPSAS 305
>AL031633-13|CAA21027.1| 951|Caenorhabditis elegans Hypothetical
protein Y39A1A.15b protein.
Length = 951
Score = 31.9 bits (69), Expect = 0.19
Identities = 19/50 (38%), Positives = 22/50 (44%)
Frame = -3
Query: 153 HHLSSLPSTGTLQRAPPLLAPTAGSRRAHRPPPRTPCGNRAPPSTPPCAS 4
HH P Q+ PP + TA S R+ TP GNR P P AS
Sbjct: 305 HHRGEHPQQQQYQQQPPSSSRTA-SERSMSAMLGTPYGNRMPAGVSPSAS 353
>AL031633-12|CAA21026.2| 1107|Caenorhabditis elegans Hypothetical
protein Y39A1A.15a protein.
Length = 1107
Score = 31.9 bits (69), Expect = 0.19
Identities = 19/50 (38%), Positives = 22/50 (44%)
Frame = -3
Query: 153 HHLSSLPSTGTLQRAPPLLAPTAGSRRAHRPPPRTPCGNRAPPSTPPCAS 4
HH P Q+ PP + TA S R+ TP GNR P P AS
Sbjct: 461 HHRGEHPQQQQYQQQPPSSSRTA-SERSMSAMLGTPYGNRMPAGVSPSAS 509
>AJ132701-1|CAA10737.1| 1107|Caenorhabditis elegans centaurin gamma
1B protein.
Length = 1107
Score = 31.9 bits (69), Expect = 0.19
Identities = 19/50 (38%), Positives = 22/50 (44%)
Frame = -3
Query: 153 HHLSSLPSTGTLQRAPPLLAPTAGSRRAHRPPPRTPCGNRAPPSTPPCAS 4
HH P Q+ PP + TA S R+ TP GNR P P AS
Sbjct: 461 HHRGEHPQQQQYQQQPPSSSRTA-SERSMSAMLGTPYGNRMPAGVSPSAS 509
>AJ132700-1|CAA10736.1| 952|Caenorhabditis elegans centaurin gamma
1A protein.
Length = 952
Score = 31.9 bits (69), Expect = 0.19
Identities = 19/50 (38%), Positives = 22/50 (44%)
Frame = -3
Query: 153 HHLSSLPSTGTLQRAPPLLAPTAGSRRAHRPPPRTPCGNRAPPSTPPCAS 4
HH P Q+ PP + TA S R+ TP GNR P P AS
Sbjct: 305 HHRGEHPQQQQYQQQPPSSSRTA-SERSMSAMLGTPYGNRMPAGVSPSAS 353
>Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical
protein T10B10.1 protein.
Length = 428
Score = 31.5 bits (68), Expect = 0.26
Identities = 16/39 (41%), Positives = 18/39 (46%)
Frame = -3
Query: 135 PSTGTLQRAPPLLAPTAGSRRAHRPPPRTPCGNRAPPST 19
PS+GT PP TA P R P RAPP+T
Sbjct: 286 PSSGTSAPQPPPRGSTAAPGTRAPPATRAPPATRAPPAT 324
>AC006674-2|AAF39941.2| 437|Caenorhabditis elegans Hypothetical
protein K12H6.12 protein.
Length = 437
Score = 30.3 bits (65), Expect = 0.59
Identities = 18/59 (30%), Positives = 24/59 (40%)
Frame = -1
Query: 191 LLSNLCRVQAEPTTISPRCRVPVHCSEHLRFSLPRQGAGEHTGRRRGHRAVTAHRPQRH 15
L +C Q EP I+ V H HL ++ + E T VTAH Q+H
Sbjct: 137 LRCQMCGPQVEPILITNYNHVAKHMKSHLNINMRQFQCTECTFASNASTKVTAHVRQQH 195
>AC006692-9|AAF39972.5| 1493|Caenorhabditis elegans Drosophila sos
homolog protein 1 protein.
Length = 1493
Score = 29.9 bits (64), Expect = 0.79
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = -3
Query: 108 PPLLAPTAGSRRAHRPPPRTPCGNRAPPSTPPCAS 4
PP L P GS PPP P NR ++P +S
Sbjct: 1428 PPALPPPRGSSVFRAPPPLPPKSNRHNSNSPTLSS 1462
>Z34533-1|CAA84302.3| 730|Caenorhabditis elegans Hypothetical
protein B0285.1 protein.
Length = 730
Score = 29.5 bits (63), Expect = 1.0
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = -3
Query: 159 AHHHLSSLPSTGTLQRAPPLLAPTAGSRRAH 67
+HHH SSLP +G PP PT S +H
Sbjct: 684 SHHHASSLPPSGG-HAPPPPPPPTQASSTSH 713
>Z29561-4|CAD91697.1| 498|Caenorhabditis elegans Hypothetical
protein R10E12.1d protein.
Length = 498
Score = 29.5 bits (63), Expect = 1.0
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = -3
Query: 108 PPLLAPTAGSRRAHRPPPRTPCGNRAPPSTPP 13
PP P A S + PPPRT +A P PP
Sbjct: 373 PPPPRPAAPSVESPIPPPRTQQSMQATPGAPP 404
>Z29561-2|CAD54152.1| 882|Caenorhabditis elegans Hypothetical
protein R10E12.1b protein.
Length = 882
Score = 29.5 bits (63), Expect = 1.0
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = -3
Query: 108 PPLLAPTAGSRRAHRPPPRTPCGNRAPPSTPP 13
PP P A S + PPPRT +A P PP
Sbjct: 757 PPPPRPAAPSVESPIPPPRTQQSMQATPGAPP 788
>Z29561-1|CAA82667.2| 861|Caenorhabditis elegans Hypothetical
protein R10E12.1a protein.
Length = 861
Score = 29.5 bits (63), Expect = 1.0
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = -3
Query: 108 PPLLAPTAGSRRAHRPPPRTPCGNRAPPSTPP 13
PP P A S + PPPRT +A P PP
Sbjct: 736 PPPPRPAAPSVESPIPPPRTQQSMQATPGAPP 767
>U73679-1|AAC67305.1| 861|Caenorhabditis elegans YNK1-a protein.
Length = 861
Score = 29.5 bits (63), Expect = 1.0
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = -3
Query: 108 PPLLAPTAGSRRAHRPPPRTPCGNRAPPSTPP 13
PP P A S + PPPRT +A P PP
Sbjct: 736 PPPPRPAAPSVESPIPPPRTQQSMQATPGAPP 767
>Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical
protein B0035.1b protein.
Length = 341
Score = 29.1 bits (62), Expect = 1.4
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = -3
Query: 111 APPLLAPTAGSRRAHRPPPRTPCGNRAPPSTPP 13
AP + P G A+ PPPR P G+ PP PP
Sbjct: 170 APGVYMPPPGMPGAY-PPPRMPIGH-GPPGGPP 200
>Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical
protein B0035.1a protein.
Length = 298
Score = 29.1 bits (62), Expect = 1.4
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = -3
Query: 111 APPLLAPTAGSRRAHRPPPRTPCGNRAPPSTPP 13
AP + P G A+ PPPR P G+ PP PP
Sbjct: 170 APGVYMPPPGMPGAY-PPPRMPIGH-GPPGGPP 200
>AC084158-11|AAK68558.1| 555|Caenorhabditis elegans Hypothetical
protein Y69A2AR.14 protein.
Length = 555
Score = 29.1 bits (62), Expect = 1.4
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = -3
Query: 144 SSLPSTGTLQRAPPLLAPTAGSRRAHRPPPRTPCGNRAPPSTPP 13
+S P+ A AP G + +PP RTP + PP PP
Sbjct: 270 TSAPTIPPQPSANSTRAPDIGKTLSTQPPRRTPQPHPKPPPPPP 313
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 28.7 bits (61), Expect = 1.8
Identities = 15/41 (36%), Positives = 18/41 (43%)
Frame = -3
Query: 135 PSTGTLQRAPPLLAPTAGSRRAHRPPPRTPCGNRAPPSTPP 13
P ++ PP + PT G RPPP G PP PP
Sbjct: 265 PPPPSVTPMPPPMPPTPG--MTPRPPPPPSSGMWPPPPPPP 303
>U93842-1|AAB52421.1| 1409|Caenorhabditis elegans regulator of
presynaptic activity protein.
Length = 1409
Score = 28.7 bits (61), Expect = 1.8
Identities = 18/50 (36%), Positives = 19/50 (38%), Gaps = 2/50 (4%)
Frame = -3
Query: 156 HHHLSSLPSTGTLQRAPPLLAPTAGSRRAHR--PPPRTPCGNRAPPSTPP 13
H S S PP AP R PP+ P G RAPP PP
Sbjct: 953 HEIAQSTRSPALPPPVPPREAPPIPKRNPPPLGAPPKVPEGARAPPPLPP 1002
>U49945-3|AAM51509.1| 1408|Caenorhabditis elegans Aboc, expulsion
defective protein3, isoform b protein.
Length = 1408
Score = 28.7 bits (61), Expect = 1.8
Identities = 18/50 (36%), Positives = 19/50 (38%), Gaps = 2/50 (4%)
Frame = -3
Query: 156 HHHLSSLPSTGTLQRAPPLLAPTAGSRRAHR--PPPRTPCGNRAPPSTPP 13
H S S PP AP R PP+ P G RAPP PP
Sbjct: 953 HEIAQSTRSPALPPPVPPREAPPIPKRNPPPLGAPPKVPEGARAPPPLPP 1002
>U49945-2|AAC47926.1| 1409|Caenorhabditis elegans Aboc, expulsion
defective protein3, isoform a protein.
Length = 1409
Score = 28.7 bits (61), Expect = 1.8
Identities = 18/50 (36%), Positives = 19/50 (38%), Gaps = 2/50 (4%)
Frame = -3
Query: 156 HHHLSSLPSTGTLQRAPPLLAPTAGSRRAHR--PPPRTPCGNRAPPSTPP 13
H S S PP AP R PP+ P G RAPP PP
Sbjct: 953 HEIAQSTRSPALPPPVPPREAPPIPKRNPPPLGAPPKVPEGARAPPPLPP 1002
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 28.7 bits (61), Expect = 1.8
Identities = 15/41 (36%), Positives = 18/41 (43%)
Frame = -3
Query: 135 PSTGTLQRAPPLLAPTAGSRRAHRPPPRTPCGNRAPPSTPP 13
P ++ PP + PT G RPPP G PP PP
Sbjct: 275 PPPPSVTPMPPPMPPTPG--MTPRPPPPPSSGMWPPPPPPP 313
>U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical
protein F41F3.3 protein.
Length = 156
Score = 28.3 bits (60), Expect = 2.4
Identities = 16/46 (34%), Positives = 19/46 (41%)
Frame = +2
Query: 38 LPHGVRGGGLCARRLPAVGARSGGARCSVPVLGSEERWWWAPLAPG 175
LP GGG C PA G GG P+ G + AP+ G
Sbjct: 57 LPSLGGGGGCCPPPAPACGGGCGGGVAPAPIGGGYAQAPQAPIGGG 102
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 28.3 bits (60), Expect = 2.4
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = -3
Query: 96 APTAGSRRAHRPPPRTPCGNRAPPSTPP 13
AP G A PPP P +RA S+PP
Sbjct: 112 APQHGDHEASPPPPPPPRKSRAGGSSPP 139
Score = 28.3 bits (60), Expect = 2.4
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = -3
Query: 114 RAPPLLAPTAGSRRAHRPPPRTPCGNRAPPSTPP 13
R PP+ P+ R PP P R PP TPP
Sbjct: 158 RRPPMTPPSPQRRPPRTPPSPEP---RNPPRTPP 188
Score = 27.5 bits (58), Expect = 4.2
Identities = 15/41 (36%), Positives = 17/41 (41%)
Frame = -3
Query: 135 PSTGTLQRAPPLLAPTAGSRRAHRPPPRTPCGNRAPPSTPP 13
P + R PP +P RPP P R PP TPP
Sbjct: 141 PPPPRVPRTPPPRSPPP-----RRPPMTPPSPQRRPPRTPP 176
Score = 27.1 bits (57), Expect = 5.5
Identities = 17/52 (32%), Positives = 20/52 (38%), Gaps = 2/52 (3%)
Frame = -3
Query: 162 GAHHHLSSLPSTGTLQRAPPLLAPTAGSRR--AHRPPPRTPCGNRAPPSTPP 13
G H P G + +PP P SR + PPP P R PP P
Sbjct: 104 GQEGHQVPAPQHGDHEASPPPPPPPRKSRAGGSSPPPPPPPRVPRTPPPRSP 155
Score = 27.1 bits (57), Expect = 5.5
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = -3
Query: 93 PTAGSRRAHRPPPRTPCGNRAPPSTPP 13
P R PPPR+P R PP TPP
Sbjct: 140 PPPPPRVPRTPPPRSPPPRR-PPMTPP 165
>Z68011-3|CAA92014.2| 821|Caenorhabditis elegans Hypothetical
protein T21B6.3 protein.
Length = 821
Score = 27.9 bits (59), Expect = 3.2
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -3
Query: 108 PPLLAPTAGSRRAHRPPPRTPCGNRAPPSTPPCASC 1
PP+LAP + A +PP P R P+ PP +C
Sbjct: 410 PPVLAPVINT--ATQPPLPQPYPTRYRPAPPPPPAC 443
>AL032625-4|CAB63350.2| 792|Caenorhabditis elegans Hypothetical
protein Y37H9A.3 protein.
Length = 792
Score = 27.9 bits (59), Expect = 3.2
Identities = 16/40 (40%), Positives = 19/40 (47%)
Frame = -3
Query: 147 LSSLPSTGTLQRAPPLLAPTAGSRRAHRPPPRTPCGNRAP 28
L SLP G L PP AP + + H+ PP G AP
Sbjct: 405 LPSLPDMGPL---PPQTAPGQAAPKLHQRPPPQEVGPLAP 441
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 27.9 bits (59), Expect = 3.2
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = -3
Query: 135 PSTGTLQRAPPLLAPTAGSRRAHRPPPRTPCGNRAPPSTPP 13
P TG R P + ++ SR R P R+P P +PP
Sbjct: 462 PPTGRPHRGGPGKSESSESREGPRGPRRSPPTGSPPTGSPP 502
Score = 26.2 bits (55), Expect = 9.7
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = -3
Query: 117 QRAPPLLAPTAGSRRAHRPPPRTPCGNRAPPSTP 16
+R+PP +P GS RPP +P P P
Sbjct: 408 RRSPPTGSPPTGSPPTGRPPRGSPPTGSPPTGLP 441
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 27.9 bits (59), Expect = 3.2
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = -3
Query: 135 PSTGTLQRAPPLLAPTAGSRRAHRPPPRTPCGNRAPPSTPP 13
P TG R P + ++ SR R P R+P P +PP
Sbjct: 483 PPTGRPHRGGPGKSESSESREGPRGPRRSPPTGSPPTGSPP 523
Score = 26.2 bits (55), Expect = 9.7
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = -3
Query: 117 QRAPPLLAPTAGSRRAHRPPPRTPCGNRAPPSTP 16
+R+PP +P GS RPP +P P P
Sbjct: 429 RRSPPTGSPPTGSPPTGRPPRGSPPTGSPPTGLP 462
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 27.9 bits (59), Expect = 3.2
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = -3
Query: 135 PSTGTLQRAPPLLAPTAGSRRAHRPPPRTPCGNRAPPSTPP 13
P TG R P + ++ SR R P R+P P +PP
Sbjct: 468 PPTGRPHRGGPGKSESSESREGPRGPRRSPPTGSPPTGSPP 508
Score = 26.2 bits (55), Expect = 9.7
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = -3
Query: 117 QRAPPLLAPTAGSRRAHRPPPRTPCGNRAPPSTP 16
+R+PP +P GS RPP +P P P
Sbjct: 414 RRSPPTGSPPTGSPPTGRPPRGSPPTGSPPTGLP 447
>AC025716-21|AAT39978.1| 586|Caenorhabditis elegans Hypothetical
protein Y39G10AR.18b protein.
Length = 586
Score = 27.9 bits (59), Expect = 3.2
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = -3
Query: 156 HHHLSSLPSTGTLQRAPPLLAPTAGSRRAHRPPPRTPCGNRAPPSTPPCA 7
HHH S+ ++ + ++ P+ A PPP P RA STPP A
Sbjct: 147 HHHRSN-----SISHSSDVIRPSQPKATAP-PPPLVPAPARATASTPPPA 190
>AC025716-20|AAT39977.2| 946|Caenorhabditis elegans Hypothetical
protein Y39G10AR.18a protein.
Length = 946
Score = 27.9 bits (59), Expect = 3.2
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = -3
Query: 156 HHHLSSLPSTGTLQRAPPLLAPTAGSRRAHRPPPRTPCGNRAPPSTPPCA 7
HHH S+ ++ + ++ P+ A PPP P RA STPP A
Sbjct: 507 HHHRSN-----SISHSSDVIRPSQPKATAP-PPPLVPAPARATASTPPPA 550
>AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical
protein Y46C8AL.2 protein.
Length = 456
Score = 27.9 bits (59), Expect = 3.2
Identities = 12/44 (27%), Positives = 22/44 (50%)
Frame = -3
Query: 147 LSSLPSTGTLQRAPPLLAPTAGSRRAHRPPPRTPCGNRAPPSTP 16
+ S P+T T ++ P T + ++ P TP ++ P+TP
Sbjct: 168 IKSTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTP 211
Score = 27.9 bits (59), Expect = 3.2
Identities = 12/44 (27%), Positives = 22/44 (50%)
Frame = -3
Query: 147 LSSLPSTGTLQRAPPLLAPTAGSRRAHRPPPRTPCGNRAPPSTP 16
+ S P+T T ++ P T + ++ P TP ++ P+TP
Sbjct: 282 MKSTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTP 325
>Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical
protein F33E2.6 protein.
Length = 846
Score = 27.5 bits (58), Expect = 4.2
Identities = 13/41 (31%), Positives = 15/41 (36%)
Frame = -3
Query: 135 PSTGTLQRAPPLLAPTAGSRRAHRPPPRTPCGNRAPPSTPP 13
P T PP + P PPP P P +TPP
Sbjct: 378 PKTEPPTTEPPKIEPPRTEPPKTEPPPTEPPKTEPPKTTPP 418
Score = 27.1 bits (57), Expect = 5.5
Identities = 13/45 (28%), Positives = 20/45 (44%)
Frame = -3
Query: 147 LSSLPSTGTLQRAPPLLAPTAGSRRAHRPPPRTPCGNRAPPSTPP 13
++ +P TG + P+ P + + PPRT PP T P
Sbjct: 682 MTEVPMTGPSRTEVPMTEPPK-TEQPRTAPPRTEVSMTLPPETVP 725
>Z81056-1|CAB02902.1| 319|Caenorhabditis elegans Hypothetical
protein F09F3.1 protein.
Length = 319
Score = 27.5 bits (58), Expect = 4.2
Identities = 12/25 (48%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
Frame = -1
Query: 398 FLIFIFGLCFFPTES-IQWSVIICV 327
FL F FG+ F T S I W+++IC+
Sbjct: 122 FLYFPFGIKRFRTTSAINWAILICI 146
>Z80214-5|CAJ76929.1| 916|Caenorhabditis elegans Hypothetical
protein C27D8.3b protein.
Length = 916
Score = 27.5 bits (58), Expect = 4.2
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -3
Query: 159 AHHHLSSLPSTGTLQRAPPLLAPTAGSR 76
+HHH S +P T T R+P L P++ R
Sbjct: 859 SHHHPSLIPPTTTSIRSPTLGPPSSQDR 886
>Z80214-4|CAB02263.1| 982|Caenorhabditis elegans Hypothetical protein
C27D8.3a protein.
Length = 982
Score = 27.5 bits (58), Expect = 4.2
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -3
Query: 159 AHHHLSSLPSTGTLQRAPPLLAPTAGSR 76
+HHH S +P T T R+P L P++ R
Sbjct: 925 SHHHPSLIPPTTTSIRSPTLGPPSSQDR 952
>U61949-6|AAB03154.1| 166|Caenorhabditis elegans Hypothetical
protein F49E8.6 protein.
Length = 166
Score = 27.5 bits (58), Expect = 4.2
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = -3
Query: 153 HHLSSLPSTGTLQRAPPLLAPTAGSRRAHRPPPRTPCGNRAPPST 19
++ S ++ T APP AP G + P T GN PP T
Sbjct: 109 YYFYSHGNSSTPSFAPPYCAPPPGPSSSAPPTLPTSSGNLPPPPT 153
>AC006790-10|AAF60736.1| 371|Caenorhabditis elegans Collagen
protein 71 protein.
Length = 371
Score = 27.5 bits (58), Expect = 4.2
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = -3
Query: 60 PPRTPCGNRAPPSTPPC 10
PP PC PP PPC
Sbjct: 204 PPEAPCEPVTPPPCPPC 220
>Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical
protein ZC168.5 protein.
Length = 172
Score = 27.1 bits (57), Expect = 5.5
Identities = 11/19 (57%), Positives = 11/19 (57%), Gaps = 2/19 (10%)
Frame = -3
Query: 63 PPPRTPCGN--RAPPSTPP 13
PPP PCG APP PP
Sbjct: 41 PPPPPPCGGGYEAPPPPPP 59
>U58748-10|AAB52970.2| 701|Caenorhabditis elegans Hypothetical
protein ZK180.6 protein.
Length = 701
Score = 27.1 bits (57), Expect = 5.5
Identities = 20/49 (40%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Frame = +2
Query: 29 GARLPHGVRGGGLCARRLPAVG-ARSGGARCSVPVLGSEERWWWAPLAP 172
G LP G GGG C+ PA G GG PV + APLAP
Sbjct: 23 GLGLP-GAGGGGCCSSAQPACGNPCGGGGAAPAPVYAA------APLAP 64
>U50135-6|AAN63429.1| 925|Caenorhabditis elegans Hypothetical
protein C52E12.1 protein.
Length = 925
Score = 27.1 bits (57), Expect = 5.5
Identities = 13/44 (29%), Positives = 19/44 (43%)
Frame = -3
Query: 150 HLSSLPSTGTLQRAPPLLAPTAGSRRAHRPPPRTPCGNRAPPST 19
H SL + + APPL + +PPP P +A S+
Sbjct: 462 HFPSLGDSSSSSSAPPLRIKVPPLVKKRQPPPPAPAPQKAKASS 505
>AL132949-22|CAB70112.2| 603|Caenorhabditis elegans Hypothetical
protein Y53F4B.25 protein.
Length = 603
Score = 27.1 bits (57), Expect = 5.5
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -3
Query: 63 PPPRTPCGNRAPPSTPP 13
PPPR P APP+ PP
Sbjct: 448 PPPRLPQPPTAPPTVPP 464
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 26.6 bits (56), Expect = 7.3
Identities = 16/47 (34%), Positives = 18/47 (38%), Gaps = 2/47 (4%)
Frame = -3
Query: 147 LSSLPSTGTLQRAPPLLAPTAGSRRAHRPPPRTPCG--NRAPPSTPP 13
L P + PP+ S A PPP P G N PP PP
Sbjct: 510 LGIAPMSTNAPPPPPMPGMAPLSTGAPTPPPPPPVGMANGGPPPPPP 556
>U59212-1|AAB09671.1| 428|Caenorhabditis elegans transmembrane
protein protein.
Length = 428
Score = 26.6 bits (56), Expect = 7.3
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = +1
Query: 244 CYYVPCIL*GLLRRLQWKMMILQNLNSLTQM 336
C+Y+PCI+ L L W I N+ SLTQM
Sbjct: 113 CFYIPCIMWRGL--LHWHSGI--NVQSLTQM 139
>U41007-13|AAA82271.2| 307|Caenorhabditis elegans (s. pombe
chromosome segregationprotein) homolog protein 1
protein.
Length = 307
Score = 26.6 bits (56), Expect = 7.3
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = -3
Query: 123 TLQRAPPLLAPTAGSRRAHRPPPRTPCGNR-APPSTPPCA 7
T +RAP L+AP++ +P R P R PSTP A
Sbjct: 217 TNRRAPMLIAPSSTPAGPSKPTARKPPTPRFKKPSTPALA 256
>U39677-5|AAN71843.1| 383|Caenorhabditis elegans Innexin protein 1,
isoform b protein.
Length = 383
Score = 26.6 bits (56), Expect = 7.3
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = +1
Query: 244 CYYVPCIL*GLLRRLQWKMMILQNLNSLTQM 336
C+Y+PCI+ L L W I N+ SLTQM
Sbjct: 113 CFYIPCIMWRGL--LHWHSGI--NVQSLTQM 139
>U39677-4|AAN71842.1| 428|Caenorhabditis elegans Innexin protein 1,
isoform a protein.
Length = 428
Score = 26.6 bits (56), Expect = 7.3
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = +1
Query: 244 CYYVPCIL*GLLRRLQWKMMILQNLNSLTQM 336
C+Y+PCI+ L L W I N+ SLTQM
Sbjct: 113 CFYIPCIMWRGL--LHWHSGI--NVQSLTQM 139
>U21308-15|AAB93316.2| 412|Caenorhabditis elegans Hypothetical
protein ZK1290.10 protein.
Length = 412
Score = 26.6 bits (56), Expect = 7.3
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = -3
Query: 147 LSSLPSTG-TLQRAPPLLAPTAGSRRAHRPP-PRTP 46
L+SLP+ + Q APP + P R + PP P TP
Sbjct: 90 LTSLPAAPPSAQVAPPAIRPPEAKRTSLEPPQPSTP 125
>AF039050-10|AAC47933.2| 362|Caenorhabditis elegans Seven tm
receptor protein 82 protein.
Length = 362
Score = 26.6 bits (56), Expect = 7.3
Identities = 7/40 (17%), Positives = 24/40 (60%)
Frame = -1
Query: 422 LKIFMICSFLIFIFGLCFFPTESIQWSVIICVKLFKFCKI 303
+++ ++ S+L+F + + T+ +++ ++ + + FC I
Sbjct: 58 IEVIILPSYLVFEYNYLLYTTQFVEYQLLSQILIVTFCSI 97
>Z70309-6|CAA94360.1| 324|Caenorhabditis elegans Hypothetical
protein R102.6 protein.
Length = 324
Score = 26.2 bits (55), Expect = 9.7
Identities = 11/22 (50%), Positives = 11/22 (50%), Gaps = 1/22 (4%)
Frame = -3
Query: 63 PPPRTPCGNRAP-PSTPPCASC 1
PPP PC P P PP SC
Sbjct: 252 PPPPPPCPMPIPCPPPPPACSC 273
>Z46791-5|CAA86755.2| 948|Caenorhabditis elegans Hypothetical
protein C09G5.6 protein.
Length = 948
Score = 26.2 bits (55), Expect = 9.7
Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 5/32 (15%)
Frame = -3
Query: 96 APTAGSRRAHRPPPRTPCG-----NRAPPSTP 16
AP +R + PPPR P G + PPS+P
Sbjct: 233 APYKPTRSPNTPPPRQPSGGYDSDGQTPPSSP 264
>U56965-10|AAB52670.1| 1041|Caenorhabditis elegans Nicotinamide
nucleotide transhydrogenaseprotein 1 protein.
Length = 1041
Score = 26.2 bits (55), Expect = 9.7
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = +3
Query: 45 TVSAAAACVLAGSLPWEREAEVLAAVYRYSAARRDGGG 158
T +A A C++ G L + A+ +A + + ++ GGG
Sbjct: 491 TTAAGALCLMGGGLMPQNSAQTMALLATFISSVNIGGG 528
>U21308-2|AAB93313.3| 507|Caenorhabditis elegans Hypothetical
protein ZK1290.6 protein.
Length = 507
Score = 26.2 bits (55), Expect = 9.7
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +2
Query: 2 HEAHGGVEGGARLPHGVRGG 61
H HGG GG+ HG GG
Sbjct: 56 HGGHGGSHGGSHGGHGSHGG 75
>AL031635-6|CAA21044.1| 761|Caenorhabditis elegans Hypothetical
protein Y47D3B.9 protein.
Length = 761
Score = 26.2 bits (55), Expect = 9.7
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -3
Query: 114 RAPPLLAPTAGSRRAHRPPPRTPCGNR 34
R PPL+ SRR+ +P R P G R
Sbjct: 716 RVPPLVVKPRSSRRSPQPVRRRPPGPR 742
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,416,871
Number of Sequences: 27780
Number of extensions: 209493
Number of successful extensions: 1262
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 979
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1226
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 692685370
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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