Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0014_H16
         (544 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY500851-1|AAS77205.1|  605|Anopheles gambiae G-protein coupled ...    24   3.7  
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    23   4.9  
CR954257-8|CAJ14159.1|  562|Anopheles gambiae putative esterase ...    23   6.5  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            23   6.5  
AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript...    23   8.6  

>AY500851-1|AAS77205.1|  605|Anopheles gambiae G-protein coupled
           receptor 3 protein.
          Length = 605

 Score = 23.8 bits (49), Expect = 3.7
 Identities = 10/39 (25%), Positives = 20/39 (51%)
 Frame = +3

Query: 141 FSFSKITRVPGKKIKTQKIEYNPIQCTVSQVSAWIYEKY 257
           +SFS +  +P      +++    +QC +  V AW ++ Y
Sbjct: 349 WSFSILFSLPITYFYEERLIQGKMQCWIDLVEAWRWQLY 387


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 23.4 bits (48), Expect = 4.9
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = +1

Query: 163 GFRVKKLKLKKLNITRFNAQFH 228
           G+R +K++ KKL++   N+  H
Sbjct: 119 GYRAQKIRSKKLSVLMHNSAKH 140


>CR954257-8|CAJ14159.1|  562|Anopheles gambiae putative esterase
           protein.
          Length = 562

 Score = 23.0 bits (47), Expect = 6.5
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -3

Query: 185 FNFFTRNPSYF 153
           +N FTRNP YF
Sbjct: 351 WNAFTRNPDYF 361


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 23.0 bits (47), Expect = 6.5
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = -1

Query: 334  FVYSSLHLIFFIRNPNIFLVINN 266
            ++Y    LI F+RN  ++ VI +
Sbjct: 2616 YIYKDQQLIVFVRNDKLYGVITD 2638


>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1209

 Score = 22.6 bits (46), Expect = 8.6
 Identities = 21/81 (25%), Positives = 36/81 (44%), Gaps = 5/81 (6%)
 Frame = +3

Query: 285 ILGFRIKKIKCSEEYTKRGRSRGHTASVFIKYKSLI*LFVQI-----TIIYDSYCVYYKI 449
           +L    + I+ + +YT+ G + G        YK LI +  QI     T++ DS  +  K 
Sbjct: 455 VLVVNAQDIREATQYTRNGAAPGPDFVYNFWYKKLITIHEQIAACFNTVLEDSRKL-PKF 513

Query: 450 VTYSLTLFTTELELISCPVNY 512
           +T  +T F  + +    P  Y
Sbjct: 514 ITGGVTYFLPKDQNTKNPAKY 534


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 535,901
Number of Sequences: 2352
Number of extensions: 9492
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50040333
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)