Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0014_H16
         (544 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL834175-1|CAD38872.1|  236|Homo sapiens hypothetical protein pr...    29   8.0  
AK131353-1|BAD18507.1|  376|Homo sapiens protein ( Homo sapiens ...    29   8.0  
AK093485-1|BAC04183.1|  318|Homo sapiens protein ( Homo sapiens ...    29   8.0  

>AL834175-1|CAD38872.1|  236|Homo sapiens hypothetical protein
           protein.
          Length = 236

 Score = 29.5 bits (63), Expect = 8.0
 Identities = 16/40 (40%), Positives = 24/40 (60%)
 Frame = +3

Query: 174 KKIKTQKIEYNPIQCTVSQVSAWIYEKYFILLFITKKILG 293
           K+ + QK+  + + C + Q SAW +    IL F+T KILG
Sbjct: 74  KRNEIQKLGVSKLNCWLIQGSAW-WCGTIILKFLTSKILG 112


>AK131353-1|BAD18507.1|  376|Homo sapiens protein ( Homo sapiens
           cDNA FLJ16377 fis, clone TKIDN2012771, weakly  similar
           to DPY-19 PROTEIN. ).
          Length = 376

 Score = 29.5 bits (63), Expect = 8.0
 Identities = 16/40 (40%), Positives = 24/40 (60%)
 Frame = +3

Query: 174 KKIKTQKIEYNPIQCTVSQVSAWIYEKYFILLFITKKILG 293
           K+ + QK+  + + C + Q SAW +    IL F+T KILG
Sbjct: 221 KRNEIQKLGVSKLNCWLIQGSAW-WCGTIILKFLTSKILG 259


>AK093485-1|BAC04183.1|  318|Homo sapiens protein ( Homo sapiens
           cDNA FLJ36166 fis, clone TESTI2026104, weakly similar to
           DPY-19 PROTEIN. ).
          Length = 318

 Score = 29.5 bits (63), Expect = 8.0
 Identities = 16/40 (40%), Positives = 24/40 (60%)
 Frame = +3

Query: 174 KKIKTQKIEYNPIQCTVSQVSAWIYEKYFILLFITKKILG 293
           K+ + QK+  + + C + Q SAW +    IL F+T KILG
Sbjct: 156 KRNEIQKLGVSKLNCWLIQGSAW-WCGTIILKFLTSKILG 194


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,440,616
Number of Sequences: 237096
Number of extensions: 1309788
Number of successful extensions: 6306
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6277
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6306
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5308067764
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)