Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_H14
(365 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80955-3|AAM97944.1| 95|Caenorhabditis elegans Mlp/crp family ... 28 1.8
U80955-2|AAM97946.1| 181|Caenorhabditis elegans Mlp/crp family ... 28 1.8
U80955-1|AAM97945.1| 113|Caenorhabditis elegans Mlp/crp family ... 28 1.8
Z69662-9|CAA93507.2| 1782|Caenorhabditis elegans Hypothetical pr... 27 3.1
Z69662-8|CAA93506.2| 1776|Caenorhabditis elegans Hypothetical pr... 27 3.1
Z68214-8|CAA92449.2| 1782|Caenorhabditis elegans Hypothetical pr... 27 3.1
Z68214-7|CAA92448.2| 1776|Caenorhabditis elegans Hypothetical pr... 27 3.1
AY396716-1|AAR29589.1| 1800|Caenorhabditis elegans DAF-15 protein. 27 3.1
Z97628-3|CAB10727.1| 819|Caenorhabditis elegans Hypothetical pr... 27 4.1
Z79755-13|CAB02114.1| 819|Caenorhabditis elegans Hypothetical p... 27 4.1
Z50109-4|CAA90441.1| 382|Caenorhabditis elegans Hypothetical pr... 27 4.1
U29244-10|AAC71091.2| 908|Caenorhabditis elegans Hypothetical p... 27 4.1
U58749-7|AAK18878.1| 84|Caenorhabditis elegans Hypothetical pr... 26 7.2
U00045-2|AAL02501.1| 1004|Caenorhabditis elegans Temporarily ass... 26 9.5
U00045-1|AAM29684.1| 1099|Caenorhabditis elegans Temporarily ass... 26 9.5
>U80955-3|AAM97944.1| 95|Caenorhabditis elegans Mlp/crp family
(muscle lim protein/cysteine-rich protein) protein 1,
isoform a protein.
Length = 95
Score = 28.3 bits (60), Expect = 1.8
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +3
Query: 297 NPKCEKCSRPVYAMERIKA 353
+PKC KC + VYA E + A
Sbjct: 8 HPKCPKCGKSVYAAEEMSA 26
>U80955-2|AAM97946.1| 181|Caenorhabditis elegans Mlp/crp family
(muscle lim protein/cysteine-rich protein) protein 1,
isoform c protein.
Length = 181
Score = 28.3 bits (60), Expect = 1.8
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +3
Query: 297 NPKCEKCSRPVYAMERIKA 353
+PKC KC + VYA E + A
Sbjct: 8 HPKCPKCGKSVYAAEEMSA 26
>U80955-1|AAM97945.1| 113|Caenorhabditis elegans Mlp/crp family
(muscle lim protein/cysteine-rich protein) protein 1,
isoform b protein.
Length = 113
Score = 28.3 bits (60), Expect = 1.8
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +3
Query: 297 NPKCEKCSRPVYAMERIKA 353
+PKC KC + VYA E + A
Sbjct: 8 HPKCPKCGKSVYAAEEMSA 26
>Z69662-9|CAA93507.2| 1782|Caenorhabditis elegans Hypothetical protein
C10C5.6b protein.
Length = 1782
Score = 27.5 bits (58), Expect = 3.1
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = +2
Query: 161 AGHRTKADQEEIEVKQKA*G*REHICIEKFREAVQK 268
AG+R + + E+IE +++A +H+ + F EAV K
Sbjct: 975 AGNRVEQESEDIEYRERAKVQIKHLEAKTFNEAVAK 1010
>Z69662-8|CAA93506.2| 1776|Caenorhabditis elegans Hypothetical protein
C10C5.6a protein.
Length = 1776
Score = 27.5 bits (58), Expect = 3.1
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = +2
Query: 161 AGHRTKADQEEIEVKQKA*G*REHICIEKFREAVQK 268
AG+R + + E+IE +++A +H+ + F EAV K
Sbjct: 975 AGNRVEQESEDIEYRERAKVQIKHLEAKTFNEAVAK 1010
>Z68214-8|CAA92449.2| 1782|Caenorhabditis elegans Hypothetical protein
C10C5.6b protein.
Length = 1782
Score = 27.5 bits (58), Expect = 3.1
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = +2
Query: 161 AGHRTKADQEEIEVKQKA*G*REHICIEKFREAVQK 268
AG+R + + E+IE +++A +H+ + F EAV K
Sbjct: 975 AGNRVEQESEDIEYRERAKVQIKHLEAKTFNEAVAK 1010
>Z68214-7|CAA92448.2| 1776|Caenorhabditis elegans Hypothetical protein
C10C5.6a protein.
Length = 1776
Score = 27.5 bits (58), Expect = 3.1
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = +2
Query: 161 AGHRTKADQEEIEVKQKA*G*REHICIEKFREAVQK 268
AG+R + + E+IE +++A +H+ + F EAV K
Sbjct: 975 AGNRVEQESEDIEYRERAKVQIKHLEAKTFNEAVAK 1010
>AY396716-1|AAR29589.1| 1800|Caenorhabditis elegans DAF-15 protein.
Length = 1800
Score = 27.5 bits (58), Expect = 3.1
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = +2
Query: 161 AGHRTKADQEEIEVKQKA*G*REHICIEKFREAVQK 268
AG+R + + E+IE +++A +H+ + F EAV K
Sbjct: 999 AGNRVEQESEDIEYRERAKVQIKHLEAKTFNEAVAK 1034
>Z97628-3|CAB10727.1| 819|Caenorhabditis elegans Hypothetical
protein F43G9.12 protein.
Length = 819
Score = 27.1 bits (57), Expect = 4.1
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +1
Query: 250 QRSCTKS*KPHLMVNRIQSVRSVRGPCMRWRGSR 351
+R C KS L V R Q +R CM+ R +R
Sbjct: 421 KRDCGKSRTSRLSVRRRQDMRDQHAECMQGRNAR 454
>Z79755-13|CAB02114.1| 819|Caenorhabditis elegans Hypothetical
protein F43G9.12 protein.
Length = 819
Score = 27.1 bits (57), Expect = 4.1
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +1
Query: 250 QRSCTKS*KPHLMVNRIQSVRSVRGPCMRWRGSR 351
+R C KS L V R Q +R CM+ R +R
Sbjct: 421 KRDCGKSRTSRLSVRRRQDMRDQHAECMQGRNAR 454
>Z50109-4|CAA90441.1| 382|Caenorhabditis elegans Hypothetical
protein C09H10.6 protein.
Length = 382
Score = 27.1 bits (57), Expect = 4.1
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +2
Query: 107 VADPNTIRVKGAEELPGGAGHRTKADQEEIEVKQK 211
+AD + IRVK A G+ T ++E +E K+K
Sbjct: 6 IADASDIRVKDASGDSDEKGNGTTTEEETVEQKEK 40
>U29244-10|AAC71091.2| 908|Caenorhabditis elegans Hypothetical
protein ZK1248.10 protein.
Length = 908
Score = 27.1 bits (57), Expect = 4.1
Identities = 16/44 (36%), Positives = 19/44 (43%)
Frame = +2
Query: 38 YFYVVITRKLAQNNGYRDSNDGVVADPNTIRVKGAEELPGGAGH 169
+F V L Y S G VAD +R AE+LP A H
Sbjct: 746 WFLVACVEHLQPEGYYTSSLIGAVADQKVLRDLVAEKLPKLAAH 789
>U58749-7|AAK18878.1| 84|Caenorhabditis elegans Hypothetical
protein B0496.7 protein.
Length = 84
Score = 26.2 bits (55), Expect = 7.2
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +3
Query: 300 PKCEKCSRPVYAMERIKA 353
P C C +PVY ER+ +
Sbjct: 2 PNCPNCQKPVYFAERVSS 19
>U00045-2|AAL02501.1| 1004|Caenorhabditis elegans Temporarily
assigned gene nameprotein 204, isoform a protein.
Length = 1004
Score = 25.8 bits (54), Expect = 9.5
Identities = 13/57 (22%), Positives = 28/57 (49%)
Frame = +2
Query: 62 KLAQNNGYRDSNDGVVADPNTIRVKGAEELPGGAGHRTKADQEEIEVKQKA*G*REH 232
K + +N Y S+D V P + +LP + ++ +++E+ E+++ R H
Sbjct: 638 KKSSHNYYHQSSDPVAPPPRRYYSTESLQLPKTSSYQRYSEEEDEEIEETYSSMRRH 694
>U00045-1|AAM29684.1| 1099|Caenorhabditis elegans Temporarily
assigned gene nameprotein 204, isoform c protein.
Length = 1099
Score = 25.8 bits (54), Expect = 9.5
Identities = 13/57 (22%), Positives = 28/57 (49%)
Frame = +2
Query: 62 KLAQNNGYRDSNDGVVADPNTIRVKGAEELPGGAGHRTKADQEEIEVKQKA*G*REH 232
K + +N Y S+D V P + +LP + ++ +++E+ E+++ R H
Sbjct: 733 KKSSHNYYHQSSDPVAPPPRRYYSTESLQLPKTSSYQRYSEEEDEEIEETYSSMRRH 789
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,629,187
Number of Sequences: 27780
Number of extensions: 127770
Number of successful extensions: 404
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 396
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 404
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 514188384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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