Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0014_H14
         (365 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    24   0.65 
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        21   4.6  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        21   4.6  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        21   4.6  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    21   4.6  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    20   8.0  

>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 23.8 bits (49), Expect = 0.65
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +3

Query: 288 GESNPKCEKCSRPVYAMERIKAERRV 365
           GE   +CE CS+     E +   RR+
Sbjct: 116 GEKPYQCEYCSKSFSVKENLSVHRRI 141


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 4.6
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = +2

Query: 53  ITRKLAQNNGYRDSNDGVVADPNTIRVKG 139
           +  K + ++GY+DS  G  A   T++ KG
Sbjct: 490 LRNKKSCHSGYKDSFAGWTAPIYTLKRKG 518


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 4.6
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = +2

Query: 53  ITRKLAQNNGYRDSNDGVVADPNTIRVKG 139
           +  K + ++GY+DS  G  A   T++ KG
Sbjct: 490 LRNKKSCHSGYKDSFAGWTAPIYTLKRKG 518


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 4.6
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = +2

Query: 53  ITRKLAQNNGYRDSNDGVVADPNTIRVKG 139
           +  K + ++GY+DS  G  A   T++ KG
Sbjct: 490 LRNKKSCHSGYKDSFAGWTAPIYTLKRKG 518


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 21.0 bits (42), Expect = 4.6
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +3

Query: 291 ESNPKCEKCS 320
           +SN KC+KCS
Sbjct: 145 KSNLKCDKCS 154


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 20.2 bits (40), Expect = 8.0
 Identities = 12/47 (25%), Positives = 19/47 (40%)
 Frame = +2

Query: 44  YVVITRKLAQNNGYRDSNDGVVADPNTIRVKGAEELPGGAGHRTKAD 184
           Y V   +L    GY++ +  ++ DP  I         G    RT+ D
Sbjct: 183 YRVWNHQLISYAGYKNPDGTIIGDPANIEFTELCMKLGWKSARTRFD 229


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,712
Number of Sequences: 438
Number of extensions: 1443
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8680350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)