Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_H13
(526 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M22142-1|AAA28869.1| 131|Drosophila melanogaster protein ( D.me... 105 3e-23
BT001651-1|AAN71406.1| 131|Drosophila melanogaster RE44119p pro... 105 3e-23
AJ271817-3|CAB72251.1| 131|Drosophila melanogaster ribosomal pr... 105 3e-23
AE014296-1654|AAF50272.1| 131|Drosophila melanogaster CG3922-PB... 105 3e-23
AY113203-1|AAM29208.1| 249|Drosophila melanogaster AT04622p pro... 29 2.9
AE014298-3094|AAN09532.1| 249|Drosophila melanogaster CG34120-P... 29 2.9
AE014298-3093|ABI30991.1| 1997|Drosophila melanogaster CG34120-P... 29 2.9
AY118607-1|AAM49976.1| 676|Drosophila melanogaster LP07116p pro... 29 5.1
AE014297-4552|AAN14221.1| 1109|Drosophila melanogaster CG31028-P... 29 5.1
AE014297-4040|AAF56648.1| 676|Drosophila melanogaster CG6296-PA... 29 5.1
AY061311-1|AAL28859.1| 313|Drosophila melanogaster LD23129p pro... 28 6.7
AE014298-1349|AAF46509.2| 313|Drosophila melanogaster CG3004-PA... 28 6.7
>M22142-1|AAA28869.1| 131|Drosophila melanogaster protein (
D.melanogaster ribosomalprotein S17 gene, complete cds.
).
Length = 131
Score = 105 bits (253), Expect = 3e-23
Identities = 51/56 (91%), Positives = 52/56 (92%)
Frame = +2
Query: 179 IPTKPLRNKIAGFTTHLMRRLIHSQVRGISIKLQEEERERRDNYVPEVSALEQDII 346
IPTKPLRNKIAG+ THLM RL HSQVRGISIKLQEEERERRDNYVP VSALEQDII
Sbjct: 41 IPTKPLRNKIAGYVTHLMGRLRHSQVRGISIKLQEEERERRDNYVPAVSALEQDII 96
Score = 41.1 bits (92), Expect = 9e-04
Identities = 20/38 (52%), Positives = 25/38 (65%)
Frame = +3
Query: 351 VRIPEXPRDMLKMLDFSNINGLQLTQPATQGGYGGRRN 464
+ + ++MLK+LDF NI GLQLTQP T GRRN
Sbjct: 96 IEVDADTKEMLKLLDFHNIRGLQLTQPNTNN--FGRRN 131
>BT001651-1|AAN71406.1| 131|Drosophila melanogaster RE44119p
protein.
Length = 131
Score = 105 bits (253), Expect = 3e-23
Identities = 51/56 (91%), Positives = 52/56 (92%)
Frame = +2
Query: 179 IPTKPLRNKIAGFTTHLMRRLIHSQVRGISIKLQEEERERRDNYVPEVSALEQDII 346
IPTKPLRNKIAG+ THLM RL HSQVRGISIKLQEEERERRDNYVP VSALEQDII
Sbjct: 41 IPTKPLRNKIAGYVTHLMGRLRHSQVRGISIKLQEEERERRDNYVPAVSALEQDII 96
Score = 41.1 bits (92), Expect = 9e-04
Identities = 20/38 (52%), Positives = 25/38 (65%)
Frame = +3
Query: 351 VRIPEXPRDMLKMLDFSNINGLQLTQPATQGGYGGRRN 464
+ + ++MLK+LDF NI GLQLTQP T GRRN
Sbjct: 96 IEVDADTKEMLKLLDFHNIRGLQLTQPNTNN--FGRRN 131
>AJ271817-3|CAB72251.1| 131|Drosophila melanogaster ribosomal
protein S17 protein.
Length = 131
Score = 105 bits (253), Expect = 3e-23
Identities = 51/56 (91%), Positives = 52/56 (92%)
Frame = +2
Query: 179 IPTKPLRNKIAGFTTHLMRRLIHSQVRGISIKLQEEERERRDNYVPEVSALEQDII 346
IPTKPLRNKIAG+ THLM RL HSQVRGISIKLQEEERERRDNYVP VSALEQDII
Sbjct: 41 IPTKPLRNKIAGYVTHLMGRLRHSQVRGISIKLQEEERERRDNYVPAVSALEQDII 96
Score = 41.1 bits (92), Expect = 9e-04
Identities = 20/38 (52%), Positives = 25/38 (65%)
Frame = +3
Query: 351 VRIPEXPRDMLKMLDFSNINGLQLTQPATQGGYGGRRN 464
+ + ++MLK+LDF NI GLQLTQP T GRRN
Sbjct: 96 IEVDADTKEMLKLLDFHNIRGLQLTQPNTNN--FGRRN 131
>AE014296-1654|AAF50272.1| 131|Drosophila melanogaster CG3922-PB
protein.
Length = 131
Score = 105 bits (253), Expect = 3e-23
Identities = 51/56 (91%), Positives = 52/56 (92%)
Frame = +2
Query: 179 IPTKPLRNKIAGFTTHLMRRLIHSQVRGISIKLQEEERERRDNYVPEVSALEQDII 346
IPTKPLRNKIAG+ THLM RL HSQVRGISIKLQEEERERRDNYVP VSALEQDII
Sbjct: 41 IPTKPLRNKIAGYVTHLMGRLRHSQVRGISIKLQEEERERRDNYVPAVSALEQDII 96
Score = 41.1 bits (92), Expect = 9e-04
Identities = 20/38 (52%), Positives = 25/38 (65%)
Frame = +3
Query: 351 VRIPEXPRDMLKMLDFSNINGLQLTQPATQGGYGGRRN 464
+ + ++MLK+LDF NI GLQLTQP T GRRN
Sbjct: 96 IEVDADTKEMLKLLDFHNIRGLQLTQPNTNN--FGRRN 131
>AY113203-1|AAM29208.1| 249|Drosophila melanogaster AT04622p
protein.
Length = 249
Score = 29.5 bits (63), Expect = 2.9
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +1
Query: 130 YTSLLLTSSIRICEKCYSY*ASSQQNCWVHHPFDETSH 243
Y + LL + ++ +SY S + C HP++E SH
Sbjct: 59 YPTRLLPTKNQVVPAAFSYICSIENRCQPAHPYEEYSH 96
>AE014298-3094|AAN09532.1| 249|Drosophila melanogaster CG34120-PB,
isoform B protein.
Length = 249
Score = 29.5 bits (63), Expect = 2.9
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +1
Query: 130 YTSLLLTSSIRICEKCYSY*ASSQQNCWVHHPFDETSH 243
Y + LL + ++ +SY S + C HP++E SH
Sbjct: 59 YPTRLLPTKNQVVPAAFSYICSIENRCQPAHPYEEYSH 96
>AE014298-3093|ABI30991.1| 1997|Drosophila melanogaster CG34120-PC,
isoform C protein.
Length = 1997
Score = 29.5 bits (63), Expect = 2.9
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +1
Query: 130 YTSLLLTSSIRICEKCYSY*ASSQQNCWVHHPFDETSH 243
Y + LL + ++ +SY S + C HP++E SH
Sbjct: 59 YPTRLLPTKNQVVPAAFSYICSIENRCQPAHPYEEYSH 96
>AY118607-1|AAM49976.1| 676|Drosophila melanogaster LP07116p
protein.
Length = 676
Score = 28.7 bits (61), Expect = 5.1
Identities = 22/67 (32%), Positives = 30/67 (44%)
Frame = +1
Query: 10 GAPPGAASTVVPGLQESARRQLTATGSCSKTKKA*IYEKYYTSLLLTSSIRICEKCYSY* 189
G P G AS + G + + TGSCS TK YY LL ++ KC S
Sbjct: 248 GQPIGKASFYMNGGRSQPGCGIDITGSCSHTKAV----LYYVEALLWNNFPSI-KCESSV 302
Query: 190 ASSQQNC 210
+++ NC
Sbjct: 303 DANKNNC 309
>AE014297-4552|AAN14221.1| 1109|Drosophila melanogaster CG31028-PB,
isoform B protein.
Length = 1109
Score = 28.7 bits (61), Expect = 5.1
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = -1
Query: 325 RYFWDIIVTPFTLLFLKLNRDSSHLGVYETSHQMGGE 215
RY ++ TP +L FL L+ D+ HL Y + + GE
Sbjct: 17 RYLTLLMNTPLSLSFLCLSADAQHLIAYISQRGLHGE 53
>AE014297-4040|AAF56648.1| 676|Drosophila melanogaster CG6296-PA
protein.
Length = 676
Score = 28.7 bits (61), Expect = 5.1
Identities = 22/67 (32%), Positives = 30/67 (44%)
Frame = +1
Query: 10 GAPPGAASTVVPGLQESARRQLTATGSCSKTKKA*IYEKYYTSLLLTSSIRICEKCYSY* 189
G P G AS + G + + TGSCS TK YY LL ++ KC S
Sbjct: 248 GQPIGKASFYMNGGRSQPGCGIDITGSCSHTKAV----LYYVEALLWNNFPSI-KCESSV 302
Query: 190 ASSQQNC 210
+++ NC
Sbjct: 303 DANKNNC 309
>AY061311-1|AAL28859.1| 313|Drosophila melanogaster LD23129p
protein.
Length = 313
Score = 28.3 bits (60), Expect = 6.7
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +2
Query: 266 SIKLQEEERERRDNYVPEVSALEQDIIASPN 358
S+ L + + ER + VPEV A QD+ SP+
Sbjct: 146 SVFLWDVKSERHERIVPEVDASIQDVAISPD 176
>AE014298-1349|AAF46509.2| 313|Drosophila melanogaster CG3004-PA
protein.
Length = 313
Score = 28.3 bits (60), Expect = 6.7
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +2
Query: 266 SIKLQEEERERRDNYVPEVSALEQDIIASPN 358
S+ L + + ER + VPEV A QD+ SP+
Sbjct: 146 SVFLWDVKSERHERIVPEVDASIQDVAISPD 176
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,782,647
Number of Sequences: 53049
Number of extensions: 453923
Number of successful extensions: 1434
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1404
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1431
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1949978112
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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