Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0014_H12
         (443 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M65002-1|AAA52622.1|   70|Homo sapiens beta-D-glucuronidase prot...    31   1.4  
M15182-1|AAA52561.1|  651|Homo sapiens GUSB protein.                   31   1.4  
BC014142-1|AAH14142.1|  651|Homo sapiens glucuronidase, beta pro...    31   1.4  
AK223406-1|BAD97126.1|  651|Homo sapiens glucuronidase, beta var...    31   1.4  
AC073261-1|AAQ96851.1|  651|Homo sapiens unknown protein.              31   1.4  

>M65002-1|AAA52622.1|   70|Homo sapiens beta-D-glucuronidase
           protein.
          Length = 70

 Score = 31.5 bits (68), Expect = 1.4
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = +1

Query: 376 GSALYPQATATRDLKTLDGIWN 441
           G  LYPQ + +R+ K LDG+W+
Sbjct: 25  GGMLYPQESPSRECKELDGLWS 46


>M15182-1|AAA52561.1|  651|Homo sapiens GUSB protein.
          Length = 651

 Score = 31.5 bits (68), Expect = 1.4
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = +1

Query: 376 GSALYPQATATRDLKTLDGIWN 441
           G  LYPQ + +R+ K LDG+W+
Sbjct: 25  GGMLYPQESPSRECKELDGLWS 46


>BC014142-1|AAH14142.1|  651|Homo sapiens glucuronidase, beta
           protein.
          Length = 651

 Score = 31.5 bits (68), Expect = 1.4
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = +1

Query: 376 GSALYPQATATRDLKTLDGIWN 441
           G  LYPQ + +R+ K LDG+W+
Sbjct: 25  GGMLYPQESPSRECKELDGLWS 46


>AK223406-1|BAD97126.1|  651|Homo sapiens glucuronidase, beta
           variant protein.
          Length = 651

 Score = 31.5 bits (68), Expect = 1.4
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = +1

Query: 376 GSALYPQATATRDLKTLDGIWN 441
           G  LYPQ + +R+ K LDG+W+
Sbjct: 25  GGMLYPQESPSRECKELDGLWS 46


>AC073261-1|AAQ96851.1|  651|Homo sapiens unknown protein.
          Length = 651

 Score = 31.5 bits (68), Expect = 1.4
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = +1

Query: 376 GSALYPQATATRDLKTLDGIWN 441
           G  LYPQ + +R+ K LDG+W+
Sbjct: 25  GGMLYPQESPSRECKELDGLWS 46


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 51,723,166
Number of Sequences: 237096
Number of extensions: 828496
Number of successful extensions: 1199
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1190
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1199
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3659526016
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)