BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_H12
(443 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT012475-1|AAS93746.1| 670|Drosophila melanogaster RE15795p pro... 35 0.057
AY069329-1|AAL39474.1| 656|Drosophila melanogaster LD04718p pro... 35 0.057
AE013599-2817|AAX52695.1| 656|Drosophila melanogaster CG15117-P... 35 0.057
AE013599-2816|AAM68434.1| 670|Drosophila melanogaster CG15117-P... 35 0.057
AE013599-2815|AAF57602.2| 656|Drosophila melanogaster CG15117-P... 35 0.057
BT010073-1|AAQ22542.1| 686|Drosophila melanogaster LD10588p pro... 33 0.18
AE014297-4806|AAF57195.1| 686|Drosophila melanogaster CG2135-PA... 33 0.18
BT029407-1|ABK57064.1| 248|Drosophila melanogaster IP02371p pro... 29 2.8
BT023300-1|AAY55716.1| 245|Drosophila melanogaster IP02370p pro... 29 2.8
AE014297-403|AAF51918.2| 245|Drosophila melanogaster CG31557-PA... 29 2.8
>BT012475-1|AAS93746.1| 670|Drosophila melanogaster RE15795p
protein.
Length = 670
Score = 34.7 bits (76), Expect = 0.057
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +1
Query: 358 KRSPSYGSALYPQATATRDLKTLDGIWN 441
K P LYP+ + TR++++LDGIWN
Sbjct: 40 KEVPQTRGMLYPRESETREVRSLDGIWN 67
>AY069329-1|AAL39474.1| 656|Drosophila melanogaster LD04718p
protein.
Length = 656
Score = 34.7 bits (76), Expect = 0.057
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +1
Query: 358 KRSPSYGSALYPQATATRDLKTLDGIWN 441
K P LYP+ + TR++++LDGIWN
Sbjct: 26 KEVPQTRGMLYPRESETREVRSLDGIWN 53
>AE013599-2817|AAX52695.1| 656|Drosophila melanogaster CG15117-PC,
isoform C protein.
Length = 656
Score = 34.7 bits (76), Expect = 0.057
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +1
Query: 358 KRSPSYGSALYPQATATRDLKTLDGIWN 441
K P LYP+ + TR++++LDGIWN
Sbjct: 26 KEVPQTRGMLYPRESETREVRSLDGIWN 53
>AE013599-2816|AAM68434.1| 670|Drosophila melanogaster CG15117-PB,
isoform B protein.
Length = 670
Score = 34.7 bits (76), Expect = 0.057
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +1
Query: 358 KRSPSYGSALYPQATATRDLKTLDGIWN 441
K P LYP+ + TR++++LDGIWN
Sbjct: 40 KEVPQTRGMLYPRESETREVRSLDGIWN 67
>AE013599-2815|AAF57602.2| 656|Drosophila melanogaster CG15117-PA,
isoform A protein.
Length = 656
Score = 34.7 bits (76), Expect = 0.057
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +1
Query: 358 KRSPSYGSALYPQATATRDLKTLDGIWN 441
K P LYP+ + TR++++LDGIWN
Sbjct: 26 KEVPQTRGMLYPRESETREVRSLDGIWN 53
>BT010073-1|AAQ22542.1| 686|Drosophila melanogaster LD10588p
protein.
Length = 686
Score = 33.1 bits (72), Expect = 0.18
Identities = 13/32 (40%), Positives = 24/32 (75%)
Frame = +1
Query: 343 YQSNKKRSPSYGSALYPQATATRDLKTLDGIW 438
Y + +K +P+ G LYP+ + TR++++LDG+W
Sbjct: 44 YDNVRKPTPTKG-LLYPRDSETREVRSLDGMW 74
>AE014297-4806|AAF57195.1| 686|Drosophila melanogaster CG2135-PA
protein.
Length = 686
Score = 33.1 bits (72), Expect = 0.18
Identities = 13/32 (40%), Positives = 24/32 (75%)
Frame = +1
Query: 343 YQSNKKRSPSYGSALYPQATATRDLKTLDGIW 438
Y + +K +P+ G LYP+ + TR++++LDG+W
Sbjct: 44 YDNVRKPTPTKG-LLYPRDSETREVRSLDGMW 74
>BT029407-1|ABK57064.1| 248|Drosophila melanogaster IP02371p
protein.
Length = 248
Score = 29.1 bits (62), Expect = 2.8
Identities = 18/75 (24%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Frame = -1
Query: 347 W*ISFVLDDKGTSAFTIVTYNITLTITDNNFF--QGHRI*QFSIFEARNNINGVF*STRV 174
W + + +D G + + + +D F +G R + + A +++ + +R
Sbjct: 84 WRLKQLTEDLGADVYNYCRFELRRMGSDGCSFAYRGLRCLKQAEMHAGTSLSTLLQCSRQ 143
Query: 173 LNATNISCYSYSKLR 129
LNATN+ YSKL+
Sbjct: 144 LNATNVELLQYSKLK 158
>BT023300-1|AAY55716.1| 245|Drosophila melanogaster IP02370p
protein.
Length = 245
Score = 29.1 bits (62), Expect = 2.8
Identities = 18/75 (24%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Frame = -1
Query: 347 W*ISFVLDDKGTSAFTIVTYNITLTITDNNFF--QGHRI*QFSIFEARNNINGVF*STRV 174
W + + +D G + + + +D F +G R + + A +++ + +R
Sbjct: 81 WRLKQLTEDLGADVYNYCRFELRRMGSDGCSFAYRGLRCLKQAEMHAGTSLSTLLQCSRQ 140
Query: 173 LNATNISCYSYSKLR 129
LNATN+ YSKL+
Sbjct: 141 LNATNVELLQYSKLK 155
>AE014297-403|AAF51918.2| 245|Drosophila melanogaster CG31557-PA
protein.
Length = 245
Score = 29.1 bits (62), Expect = 2.8
Identities = 18/75 (24%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Frame = -1
Query: 347 W*ISFVLDDKGTSAFTIVTYNITLTITDNNFF--QGHRI*QFSIFEARNNINGVF*STRV 174
W + + +D G + + + +D F +G R + + A +++ + +R
Sbjct: 81 WRLKQLTEDLGADVYNYCRFELRRMGSDGCSFAYRGLRCLKQAEMHAGTSLSTLLQCSRQ 140
Query: 173 LNATNISCYSYSKLR 129
LNATN+ YSKL+
Sbjct: 141 LNATNVELLQYSKLK 155
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,468,518
Number of Sequences: 53049
Number of extensions: 272672
Number of successful extensions: 553
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 543
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 553
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1438687674
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -