Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_H11
(628 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006672-4|AAK84542.1| 151|Caenorhabditis elegans Hypothetical ... 103 1e-22
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 72 3e-13
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 72 3e-13
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 70 2e-12
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 70 2e-12
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 70 2e-12
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 69 4e-12
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 69 4e-12
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 69 4e-12
U80837-3|AAB37904.2| 384|Caenorhabditis elegans Hypothetical pr... 62 4e-10
AF039041-1|AAP46271.1| 1067|Caenorhabditis elegans Laminin relat... 43 2e-04
U15406-1|AAA50456.1| 2272|Caenorhabditis elegans gag, pol and en... 41 6e-04
L23646-13|AAA28035.2| 2175|Caenorhabditis elegans C. elegans RET... 41 6e-04
L23646-12|AAL02516.1| 2186|Caenorhabditis elegans C. elegans RET... 41 6e-04
Z81494-3|CAB61009.1| 196|Caenorhabditis elegans Hypothetical pr... 40 0.001
Z81494-2|CAB61008.1| 227|Caenorhabditis elegans Hypothetical pr... 40 0.001
U75915-1|AAB49759.1| 227|Caenorhabditis elegans Lin-28 protein. 40 0.001
U75912-1|AAC47476.1| 227|Caenorhabditis elegans LIN-28 protein. 40 0.001
Z68297-6|CAE45045.1| 302|Caenorhabditis elegans Hypothetical pr... 40 0.002
AC006672-5|AAM98003.1| 42|Caenorhabditis elegans Hypothetical ... 39 0.003
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 38 0.004
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 38 0.004
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 38 0.004
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 38 0.004
AF016670-8|AAB66101.1| 783|Caenorhabditis elegans Hypothetical ... 35 0.055
U21322-3|AAA62541.1| 1425|Caenorhabditis elegans Hypothetical pr... 34 0.096
L12018-4|AAK68342.1| 456|Caenorhabditis elegans Dnaj domain (pr... 33 0.22
L12018-3|AAK68343.1| 446|Caenorhabditis elegans Dnaj domain (pr... 33 0.22
AF025471-8|AAB71060.1| 1019|Caenorhabditis elegans Hypothetical ... 33 0.22
Z99270-3|CAL64001.1| 98|Caenorhabditis elegans Hypothetical pr... 31 0.67
Z92828-7|CAE48500.1| 700|Caenorhabditis elegans Hypothetical pr... 31 0.67
Z82258-5|CAL63989.1| 98|Caenorhabditis elegans Hypothetical pr... 31 0.67
Z81561-2|CAB04551.2| 700|Caenorhabditis elegans Hypothetical pr... 31 0.67
Z54236-5|CAA90980.1| 386|Caenorhabditis elegans Hypothetical pr... 31 0.89
AF077533-3|AAC64626.1| 1023|Caenorhabditis elegans Hypothetical ... 31 0.89
Z82094-3|CAB05024.1| 2561|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z81120-8|CAB03348.1| 2561|Caenorhabditis elegans Hypothetical pr... 29 2.1
U62281-1|AAD09363.1| 925|Caenorhabditis elegans lipoprotein rec... 29 2.1
AL132952-16|CAC70119.1| 107|Caenorhabditis elegans Hypothetical... 29 2.1
Z81496-9|CAB04065.1| 153|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical pr... 29 2.7
U20861-8|AAA62297.3| 372|Caenorhabditis elegans Hypothetical pr... 29 2.7
M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-re... 29 2.7
AF342986-1|AAL73338.1| 700|Caenorhabditis elegans KAL-1 protein. 29 2.7
AF100656-7|AAF99964.2| 615|Caenorhabditis elegans Hypothetical ... 29 2.7
U62639-1|AAD09364.1| 925|Caenorhabditis elegans lr protein. 29 3.6
AF185706-1|AAD56241.1| 925|Caenorhabditis elegans yolk receptor... 29 3.6
AF036703-1|AAB88554.3| 925|Caenorhabditis elegans Receptor medi... 29 3.6
AL132862-14|CAB60548.1| 541|Caenorhabditis elegans Hypothetical... 28 4.8
AF016439-2|AAB65897.1| 176|Caenorhabditis elegans Hypothetical ... 28 4.8
Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical p... 28 6.3
AL031630-5|CAA20985.1| 915|Caenorhabditis elegans Hypothetical ... 28 6.3
AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical ... 28 6.3
AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha... 28 6.3
Z54281-2|CAA91045.3| 399|Caenorhabditis elegans Hypothetical pr... 27 8.3
U00035-3|AAA50645.1| 548|Caenorhabditis elegans Egg sterile (un... 27 8.3
AL132895-2|CAC14404.1| 613|Caenorhabditis elegans Hypothetical ... 27 8.3
AL021487-10|CAA16357.2| 1592|Caenorhabditis elegans Hypothetical... 27 8.3
>AC006672-4|AAK84542.1| 151|Caenorhabditis elegans Hypothetical
protein K08D12.3a protein.
Length = 151
Score = 103 bits (247), Expect = 1e-22
Identities = 60/160 (37%), Positives = 73/160 (45%), Gaps = 17/160 (10%)
Frame = +2
Query: 134 MSSSVCYKCNRTGHFARECTQG-GVGARDAGFNRQREKCFKCNRTGHFARDCKEEAD--- 301
MS CYKC + GH +R C G G R G C+ C TGHF+RDC +
Sbjct: 1 MSDRNCYKCQQPGHISRNCPNGESDGGRRGGGG--GSTCYNCQETGHFSRDCPKGGSGGG 58
Query: 302 ---------RCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRDNSNQTCYN 454
CY C G GH +R+C PS + +G E GR Q CYN
Sbjct: 59 QRGGGGGGGSCYNCGGRGHYSRDC------PSARSEGGSGGYGGRGGE-GRSFGGQKCYN 111
Query: 455 CNKSGHISRNCPDG----TKTLYVCGKPGHISRDCDEERN 562
C +SGHISR C + K Y C + GHISRDC + N
Sbjct: 112 CGRSGHISRECTESGSAEEKRCYQCQETGHISRDCPSQTN 151
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 72.1 bits (169), Expect = 3e-13
Identities = 42/126 (33%), Positives = 54/126 (42%), Gaps = 6/126 (4%)
Frame = +2
Query: 149 CYKCNRTGHFARECTQGGVGARDAGFNRQREKCFKCNRTGHFARDCKE---EADRCYRCN 319
C+ C GH ++EC + V R C C + GHFA DC + C C
Sbjct: 572 CHNCGEEGHISKECDKPKV---------PRFPCRNCEQLGHFASDCDQPRVPRGPCRNCG 622
Query: 320 GTGHIARECAQSPDEP--SCYNCNKTGHIARNCP-EGGRDNSNQTCYNCNKSGHISRNCP 490
GH A +C Q P P C NC + GH A++C E R + C C + GH CP
Sbjct: 623 IEGHFAVDCDQ-PKVPRGPCRNCGQEGHFAKDCQNERVRMEPTEPCRRCAEEGHWGYECP 681
Query: 491 DGTKTL 508
K L
Sbjct: 682 TRPKDL 687
Score = 60.5 bits (140), Expect = 1e-09
Identities = 36/107 (33%), Positives = 50/107 (46%), Gaps = 6/107 (5%)
Frame = +2
Query: 257 NRTGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS--CYNCNKTGHIARNCPEGGRD 430
N+ G++ D E C+ C GHI++EC P P C NC + GH A +C +
Sbjct: 558 NQRGNW--DGGERPRGCHNCGEEGHISKEC-DKPKVPRFPCRNCEQLGHFASDCDQPRVP 614
Query: 431 NSNQTCYNCNKSGHISRNCPDGTKT----LYVCGKPGHISRDCDEER 559
C NC GH + +C D K CG+ GH ++DC ER
Sbjct: 615 RG--PCRNCGIEGHFAVDC-DQPKVPRGPCRNCGQEGHFAKDCQNER 658
Score = 32.7 bits (71), Expect = 0.22
Identities = 15/52 (28%), Positives = 22/52 (42%)
Frame = +2
Query: 131 KMSSSVCYKCNRTGHFARECTQGGVGARDAGFNRQREKCFKCNRTGHFARDC 286
K+ C C + GHFA++C V E C +C GH+ +C
Sbjct: 635 KVPRGPCRNCGQEGHFAKDCQNERVRMEPT------EPCRRCAEEGHWGYEC 680
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line
helicase protein 4 protein.
Length = 1156
Score = 72.1 bits (169), Expect = 3e-13
Identities = 42/126 (33%), Positives = 54/126 (42%), Gaps = 6/126 (4%)
Frame = +2
Query: 149 CYKCNRTGHFARECTQGGVGARDAGFNRQREKCFKCNRTGHFARDCKE---EADRCYRCN 319
C+ C GH ++EC + V R C C + GHFA DC + C C
Sbjct: 572 CHNCGEEGHISKECDKPKV---------PRFPCRNCEQLGHFASDCDQPRVPRGPCRNCG 622
Query: 320 GTGHIARECAQSPDEP--SCYNCNKTGHIARNCP-EGGRDNSNQTCYNCNKSGHISRNCP 490
GH A +C Q P P C NC + GH A++C E R + C C + GH CP
Sbjct: 623 IEGHFAVDCDQ-PKVPRGPCRNCGQEGHFAKDCQNERVRMEPTEPCRRCAEEGHWGYECP 681
Query: 491 DGTKTL 508
K L
Sbjct: 682 TRPKDL 687
Score = 60.5 bits (140), Expect = 1e-09
Identities = 36/107 (33%), Positives = 50/107 (46%), Gaps = 6/107 (5%)
Frame = +2
Query: 257 NRTGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS--CYNCNKTGHIARNCPEGGRD 430
N+ G++ D E C+ C GHI++EC P P C NC + GH A +C +
Sbjct: 558 NQRGNW--DGGERPRGCHNCGEEGHISKEC-DKPKVPRFPCRNCEQLGHFASDCDQPRVP 614
Query: 431 NSNQTCYNCNKSGHISRNCPDGTKT----LYVCGKPGHISRDCDEER 559
C NC GH + +C D K CG+ GH ++DC ER
Sbjct: 615 RG--PCRNCGIEGHFAVDC-DQPKVPRGPCRNCGQEGHFAKDCQNER 658
Score = 32.7 bits (71), Expect = 0.22
Identities = 15/52 (28%), Positives = 22/52 (42%)
Frame = +2
Query: 131 KMSSSVCYKCNRTGHFARECTQGGVGARDAGFNRQREKCFKCNRTGHFARDC 286
K+ C C + GHFA++C V E C +C GH+ +C
Sbjct: 635 KVPRGPCRNCGQEGHFAKDCQNERVRMEPT------EPCRRCAEEGHWGYEC 680
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 69.7 bits (163), Expect = 2e-12
Identities = 42/131 (32%), Positives = 58/131 (44%), Gaps = 15/131 (11%)
Frame = +2
Query: 200 GVGARDAGFNRQREKCFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQS--P 358
G G +D G + CF C + GH + DC KE R CY C GH +R+C + P
Sbjct: 360 GGGGQDRG--ERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKP 417
Query: 359 DE-----PSCYNCNKTGHIARNCPEGGRDNSNQ---TCYNCNKSGHISRNCPDGTKTLYV 514
E S + G EG +N + C+NC GH S CP+ + +
Sbjct: 418 REGRNGFTSGFGGGNDGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPEPPRGCFN 477
Query: 515 CGKPGHISRDC 547
CG+ GH S +C
Sbjct: 478 CGEQGHRSNEC 488
Score = 59.7 bits (138), Expect = 2e-09
Identities = 38/134 (28%), Positives = 57/134 (42%), Gaps = 15/134 (11%)
Frame = +2
Query: 146 VCYKCNRTGHFARECTQ--------GGVGARDAGF--NRQREKCFKCNRTGHFARDCKEE 295
VCY C + GH +R+C + G +GF F T F E
Sbjct: 283 VCYNCQQPGHNSRDCPEERKPREGRNGFTGGSSGFGGGNGGGTGFDSGLTNGFGSGNNGE 342
Query: 296 A---DRCYRCNGTGHIARECAQSPDE--PSCYNCNKTGHIARNCPEGGRDNSNQTCYNCN 460
+ + N G + Q E +C+NC + GH + +CPE ++ + CYNC
Sbjct: 343 SGFGSGGFGGNSNGFGSGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQ 402
Query: 461 KSGHISRNCPDGTK 502
+ GH SR+CP+ K
Sbjct: 403 QPGHNSRDCPEERK 416
Score = 59.3 bits (137), Expect = 2e-09
Identities = 47/173 (27%), Positives = 67/173 (38%), Gaps = 27/173 (15%)
Frame = +2
Query: 149 CYKCNRTGHFARECTQGGVGARDAGFNRQREKCFKCNRTGHFARDC-KEEADRCYRCN-- 319
C+ C + GH + +C + R+ C+ C + GH +RDC +E R R
Sbjct: 259 CFNCQQPGHRSNDCPEPKK-------EREPRVCYNCQQPGHNSRDCPEERKPREGRNGFT 311
Query: 320 ------------GTGH---IARECAQSPDEPSCYNCNKTGHIARNCPEGG----RDNSNQ 442
GTG + + S + G + GG R N
Sbjct: 312 GGSSGFGGGNGGGTGFDSGLTNGFGSGNNGESGFGSGGFGGNSNGFGSGGGGQDRGERNN 371
Query: 443 TCYNCNKSGHISRNCPDGTK-----TLYVCGKPGHISRDCDEERN*HAPNNSY 586
C+NC + GH S +CP+ K Y C +PGH SRDC EER N +
Sbjct: 372 NCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPREGRNGF 424
Score = 59.3 bits (137), Expect = 2e-09
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 5/95 (5%)
Frame = +2
Query: 146 VCYKCNRTGHFARECTQ-----GGVGARDAGFNRQREKCFKCNRTGHFARDCKEEADRCY 310
VCY C + GH +R+C + G +GF + F F + + +C+
Sbjct: 397 VCYNCQQPGHNSRDCPEERKPREGRNGFTSGFGGGNDGGFGGGNAEGFGNNEERGPMKCF 456
Query: 311 RCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCP 415
C G GH + EC + P C+NC + GH + CP
Sbjct: 457 NCKGEGHRSAECPEPP--RGCFNCGEQGHRSNECP 489
Score = 57.6 bits (133), Expect = 7e-09
Identities = 19/45 (42%), Positives = 30/45 (66%)
Frame = +2
Query: 368 SCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNCPDGTK 502
+C+NC + GH + +CPE ++ + CYNC + GH SR+CP+ K
Sbjct: 258 NCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERK 302
Score = 56.4 bits (130), Expect = 2e-08
Identities = 37/133 (27%), Positives = 53/133 (39%), Gaps = 15/133 (11%)
Frame = +2
Query: 149 CYKCNRTGHFARECTQGGVGARDAGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNGT- 325
C+ C + GH + +C + R+ C+ C + GH +RDC EE NG
Sbjct: 373 CFNCQQPGHRSNDCPEPKK-------EREPRVCYNCQQPGHNSRDCPEERKPREGRNGFT 425
Query: 326 ------------GHIARECAQSPDEP--SCYNCNKTGHIARNCPEGGRDNSNQTCYNCNK 463
G A + + C+NC GH + CPE R C+NC +
Sbjct: 426 SGFGGGNDGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPEPPRG-----CFNCGE 480
Query: 464 SGHISRNCPDGTK 502
GH S CP+ K
Sbjct: 481 QGHRSNECPNPAK 493
Score = 54.4 bits (125), Expect = 6e-08
Identities = 26/63 (41%), Positives = 33/63 (52%), Gaps = 7/63 (11%)
Frame = +2
Query: 419 GGRDNS--NQTCYNCNKSGHISRNCPDGTK-----TLYVCGKPGHISRDCDEERN*HAPN 577
GG+D N C+NC + GH S +CP+ K Y C +PGH SRDC EER
Sbjct: 248 GGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPREGR 307
Query: 578 NSY 586
N +
Sbjct: 308 NGF 310
Score = 48.4 bits (110), Expect = 4e-06
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Frame = +2
Query: 263 TGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPEGGRDN 433
+G +D E + C+ C GH + +C + E CYNC + GH +R+CPE +
Sbjct: 245 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPR 304
Query: 434 SNQTCYNCNKSG 469
+ + SG
Sbjct: 305 EGRNGFTGGSSG 316
Score = 46.8 bits (106), Expect = 1e-05
Identities = 29/112 (25%), Positives = 43/112 (38%), Gaps = 15/112 (13%)
Frame = +2
Query: 263 TGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPE----- 418
+G +D E + C+ C GH + +C + E CYNC + GH +R+CPE
Sbjct: 359 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPR 418
Query: 419 -------GGRDNSNQTCYNCNKSGHISRNCPDGTKTLYVCGKPGHISRDCDE 553
G N + + N G + C GH S +C E
Sbjct: 419 EGRNGFTSGFGGGNDGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPE 470
Score = 42.7 bits (96), Expect = 2e-04
Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 5/56 (8%)
Frame = +2
Query: 200 GVGARDAGFNRQREKCFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQ 352
G G +D G + CF C + GH + DC KE R CY C GH +R+C +
Sbjct: 246 GGGGQDRG--ERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPE 299
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 69.7 bits (163), Expect = 2e-12
Identities = 42/131 (32%), Positives = 58/131 (44%), Gaps = 15/131 (11%)
Frame = +2
Query: 200 GVGARDAGFNRQREKCFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQS--P 358
G G +D G + CF C + GH + DC KE R CY C GH +R+C + P
Sbjct: 360 GGGGQDRG--ERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKP 417
Query: 359 DE-----PSCYNCNKTGHIARNCPEGGRDNSNQ---TCYNCNKSGHISRNCPDGTKTLYV 514
E S + G EG +N + C+NC GH S CP+ + +
Sbjct: 418 REGRNGFTSGFGGGNDGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPEPPRGCFN 477
Query: 515 CGKPGHISRDC 547
CG+ GH S +C
Sbjct: 478 CGEQGHRSNEC 488
Score = 59.7 bits (138), Expect = 2e-09
Identities = 38/134 (28%), Positives = 57/134 (42%), Gaps = 15/134 (11%)
Frame = +2
Query: 146 VCYKCNRTGHFARECTQ--------GGVGARDAGF--NRQREKCFKCNRTGHFARDCKEE 295
VCY C + GH +R+C + G +GF F T F E
Sbjct: 283 VCYNCQQPGHNSRDCPEERKPREGRNGFTGGSSGFGGGNGGGTGFDSGLTNGFGSGNNGE 342
Query: 296 A---DRCYRCNGTGHIARECAQSPDE--PSCYNCNKTGHIARNCPEGGRDNSNQTCYNCN 460
+ + N G + Q E +C+NC + GH + +CPE ++ + CYNC
Sbjct: 343 SGFGSGGFGGNSNGFGSGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQ 402
Query: 461 KSGHISRNCPDGTK 502
+ GH SR+CP+ K
Sbjct: 403 QPGHNSRDCPEERK 416
Score = 59.3 bits (137), Expect = 2e-09
Identities = 47/173 (27%), Positives = 67/173 (38%), Gaps = 27/173 (15%)
Frame = +2
Query: 149 CYKCNRTGHFARECTQGGVGARDAGFNRQREKCFKCNRTGHFARDC-KEEADRCYRCN-- 319
C+ C + GH + +C + R+ C+ C + GH +RDC +E R R
Sbjct: 259 CFNCQQPGHRSNDCPEPKK-------EREPRVCYNCQQPGHNSRDCPEERKPREGRNGFT 311
Query: 320 ------------GTGH---IARECAQSPDEPSCYNCNKTGHIARNCPEGG----RDNSNQ 442
GTG + + S + G + GG R N
Sbjct: 312 GGSSGFGGGNGGGTGFDSGLTNGFGSGNNGESGFGSGGFGGNSNGFGSGGGGQDRGERNN 371
Query: 443 TCYNCNKSGHISRNCPDGTK-----TLYVCGKPGHISRDCDEERN*HAPNNSY 586
C+NC + GH S +CP+ K Y C +PGH SRDC EER N +
Sbjct: 372 NCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPREGRNGF 424
Score = 59.3 bits (137), Expect = 2e-09
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 5/95 (5%)
Frame = +2
Query: 146 VCYKCNRTGHFARECTQ-----GGVGARDAGFNRQREKCFKCNRTGHFARDCKEEADRCY 310
VCY C + GH +R+C + G +GF + F F + + +C+
Sbjct: 397 VCYNCQQPGHNSRDCPEERKPREGRNGFTSGFGGGNDGGFGGGNAEGFGNNEERGPMKCF 456
Query: 311 RCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCP 415
C G GH + EC + P C+NC + GH + CP
Sbjct: 457 NCKGEGHRSAECPEPP--RGCFNCGEQGHRSNECP 489
Score = 57.6 bits (133), Expect = 7e-09
Identities = 19/45 (42%), Positives = 30/45 (66%)
Frame = +2
Query: 368 SCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNCPDGTK 502
+C+NC + GH + +CPE ++ + CYNC + GH SR+CP+ K
Sbjct: 258 NCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERK 302
Score = 56.4 bits (130), Expect = 2e-08
Identities = 37/133 (27%), Positives = 53/133 (39%), Gaps = 15/133 (11%)
Frame = +2
Query: 149 CYKCNRTGHFARECTQGGVGARDAGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNGT- 325
C+ C + GH + +C + R+ C+ C + GH +RDC EE NG
Sbjct: 373 CFNCQQPGHRSNDCPEPKK-------EREPRVCYNCQQPGHNSRDCPEERKPREGRNGFT 425
Query: 326 ------------GHIARECAQSPDEP--SCYNCNKTGHIARNCPEGGRDNSNQTCYNCNK 463
G A + + C+NC GH + CPE R C+NC +
Sbjct: 426 SGFGGGNDGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPEPPRG-----CFNCGE 480
Query: 464 SGHISRNCPDGTK 502
GH S CP+ K
Sbjct: 481 QGHRSNECPNPAK 493
Score = 54.4 bits (125), Expect = 6e-08
Identities = 26/63 (41%), Positives = 33/63 (52%), Gaps = 7/63 (11%)
Frame = +2
Query: 419 GGRDNS--NQTCYNCNKSGHISRNCPDGTK-----TLYVCGKPGHISRDCDEERN*HAPN 577
GG+D N C+NC + GH S +CP+ K Y C +PGH SRDC EER
Sbjct: 248 GGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPREGR 307
Query: 578 NSY 586
N +
Sbjct: 308 NGF 310
Score = 48.4 bits (110), Expect = 4e-06
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Frame = +2
Query: 263 TGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPEGGRDN 433
+G +D E + C+ C GH + +C + E CYNC + GH +R+CPE +
Sbjct: 245 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPR 304
Query: 434 SNQTCYNCNKSG 469
+ + SG
Sbjct: 305 EGRNGFTGGSSG 316
Score = 46.8 bits (106), Expect = 1e-05
Identities = 29/112 (25%), Positives = 43/112 (38%), Gaps = 15/112 (13%)
Frame = +2
Query: 263 TGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPE----- 418
+G +D E + C+ C GH + +C + E CYNC + GH +R+CPE
Sbjct: 359 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPR 418
Query: 419 -------GGRDNSNQTCYNCNKSGHISRNCPDGTKTLYVCGKPGHISRDCDE 553
G N + + N G + C GH S +C E
Sbjct: 419 EGRNGFTSGFGGGNDGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPE 470
Score = 42.7 bits (96), Expect = 2e-04
Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 5/56 (8%)
Frame = +2
Query: 200 GVGARDAGFNRQREKCFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQ 352
G G +D G + CF C + GH + DC KE R CY C GH +R+C +
Sbjct: 246 GGGGQDRG--ERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPE 299
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 69.7 bits (163), Expect = 2e-12
Identities = 42/131 (32%), Positives = 58/131 (44%), Gaps = 15/131 (11%)
Frame = +2
Query: 200 GVGARDAGFNRQREKCFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQS--P 358
G G +D G + CF C + GH + DC KE R CY C GH +R+C + P
Sbjct: 360 GGGGQDRG--ERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKP 417
Query: 359 DE-----PSCYNCNKTGHIARNCPEGGRDNSNQ---TCYNCNKSGHISRNCPDGTKTLYV 514
E S + G EG +N + C+NC GH S CP+ + +
Sbjct: 418 REGRNGFTSGFGGGNDGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPEPPRGCFN 477
Query: 515 CGKPGHISRDC 547
CG+ GH S +C
Sbjct: 478 CGEQGHRSNEC 488
Score = 59.7 bits (138), Expect = 2e-09
Identities = 38/134 (28%), Positives = 57/134 (42%), Gaps = 15/134 (11%)
Frame = +2
Query: 146 VCYKCNRTGHFARECTQ--------GGVGARDAGF--NRQREKCFKCNRTGHFARDCKEE 295
VCY C + GH +R+C + G +GF F T F E
Sbjct: 283 VCYNCQQPGHNSRDCPEERKPREGRNGFTGGSSGFGGGNGGGTGFDSGLTNGFGSGNNGE 342
Query: 296 A---DRCYRCNGTGHIARECAQSPDE--PSCYNCNKTGHIARNCPEGGRDNSNQTCYNCN 460
+ + N G + Q E +C+NC + GH + +CPE ++ + CYNC
Sbjct: 343 SGFGSGGFGGNSNGFGSGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQ 402
Query: 461 KSGHISRNCPDGTK 502
+ GH SR+CP+ K
Sbjct: 403 QPGHNSRDCPEERK 416
Score = 59.3 bits (137), Expect = 2e-09
Identities = 47/173 (27%), Positives = 67/173 (38%), Gaps = 27/173 (15%)
Frame = +2
Query: 149 CYKCNRTGHFARECTQGGVGARDAGFNRQREKCFKCNRTGHFARDC-KEEADRCYRCN-- 319
C+ C + GH + +C + R+ C+ C + GH +RDC +E R R
Sbjct: 259 CFNCQQPGHRSNDCPEPKK-------EREPRVCYNCQQPGHNSRDCPEERKPREGRNGFT 311
Query: 320 ------------GTGH---IARECAQSPDEPSCYNCNKTGHIARNCPEGG----RDNSNQ 442
GTG + + S + G + GG R N
Sbjct: 312 GGSSGFGGGNGGGTGFDSGLTNGFGSGNNGESGFGSGGFGGNSNGFGSGGGGQDRGERNN 371
Query: 443 TCYNCNKSGHISRNCPDGTK-----TLYVCGKPGHISRDCDEERN*HAPNNSY 586
C+NC + GH S +CP+ K Y C +PGH SRDC EER N +
Sbjct: 372 NCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPREGRNGF 424
Score = 59.3 bits (137), Expect = 2e-09
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 5/95 (5%)
Frame = +2
Query: 146 VCYKCNRTGHFARECTQ-----GGVGARDAGFNRQREKCFKCNRTGHFARDCKEEADRCY 310
VCY C + GH +R+C + G +GF + F F + + +C+
Sbjct: 397 VCYNCQQPGHNSRDCPEERKPREGRNGFTSGFGGGNDGGFGGGNAEGFGNNEERGPMKCF 456
Query: 311 RCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCP 415
C G GH + EC + P C+NC + GH + CP
Sbjct: 457 NCKGEGHRSAECPEPP--RGCFNCGEQGHRSNECP 489
Score = 57.6 bits (133), Expect = 7e-09
Identities = 19/45 (42%), Positives = 30/45 (66%)
Frame = +2
Query: 368 SCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNCPDGTK 502
+C+NC + GH + +CPE ++ + CYNC + GH SR+CP+ K
Sbjct: 258 NCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERK 302
Score = 56.4 bits (130), Expect = 2e-08
Identities = 37/133 (27%), Positives = 53/133 (39%), Gaps = 15/133 (11%)
Frame = +2
Query: 149 CYKCNRTGHFARECTQGGVGARDAGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNGT- 325
C+ C + GH + +C + R+ C+ C + GH +RDC EE NG
Sbjct: 373 CFNCQQPGHRSNDCPEPKK-------EREPRVCYNCQQPGHNSRDCPEERKPREGRNGFT 425
Query: 326 ------------GHIARECAQSPDEP--SCYNCNKTGHIARNCPEGGRDNSNQTCYNCNK 463
G A + + C+NC GH + CPE R C+NC +
Sbjct: 426 SGFGGGNDGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPEPPRG-----CFNCGE 480
Query: 464 SGHISRNCPDGTK 502
GH S CP+ K
Sbjct: 481 QGHRSNECPNPAK 493
Score = 54.4 bits (125), Expect = 6e-08
Identities = 26/63 (41%), Positives = 33/63 (52%), Gaps = 7/63 (11%)
Frame = +2
Query: 419 GGRDNS--NQTCYNCNKSGHISRNCPDGTK-----TLYVCGKPGHISRDCDEERN*HAPN 577
GG+D N C+NC + GH S +CP+ K Y C +PGH SRDC EER
Sbjct: 248 GGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPREGR 307
Query: 578 NSY 586
N +
Sbjct: 308 NGF 310
Score = 48.4 bits (110), Expect = 4e-06
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Frame = +2
Query: 263 TGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPEGGRDN 433
+G +D E + C+ C GH + +C + E CYNC + GH +R+CPE +
Sbjct: 245 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPR 304
Query: 434 SNQTCYNCNKSG 469
+ + SG
Sbjct: 305 EGRNGFTGGSSG 316
Score = 46.8 bits (106), Expect = 1e-05
Identities = 29/112 (25%), Positives = 43/112 (38%), Gaps = 15/112 (13%)
Frame = +2
Query: 263 TGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPE----- 418
+G +D E + C+ C GH + +C + E CYNC + GH +R+CPE
Sbjct: 359 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPR 418
Query: 419 -------GGRDNSNQTCYNCNKSGHISRNCPDGTKTLYVCGKPGHISRDCDE 553
G N + + N G + C GH S +C E
Sbjct: 419 EGRNGFTSGFGGGNDGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPE 470
Score = 42.7 bits (96), Expect = 2e-04
Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 5/56 (8%)
Frame = +2
Query: 200 GVGARDAGFNRQREKCFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQ 352
G G +D G + CF C + GH + DC KE R CY C GH +R+C +
Sbjct: 246 GGGGQDRG--ERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPE 299
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 68.5 bits (160), Expect = 4e-12
Identities = 40/133 (30%), Positives = 52/133 (39%), Gaps = 17/133 (12%)
Frame = +2
Query: 200 GVGARDAGFNRQREKCFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQS--P 358
G G G + CF C + GH + DC KE R CY C GH +REC + P
Sbjct: 145 GFGEGGHGGGERNNNCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEERKP 204
Query: 359 DEPSCYNCNKTGHIARNCPE----------GGRDNSNQTCYNCNKSGHISRNCPDGTKTL 508
E N GG + C+NC GH S CP+ +
Sbjct: 205 REGRTGGFGGGAGFGNNGGNDGFGGDGGFGGGEERGPMKCFNCKGEGHRSAECPEPPRGC 264
Query: 509 YVCGKPGHISRDC 547
+ CG+ GH S +C
Sbjct: 265 FNCGEQGHRSNEC 277
Score = 59.3 bits (137), Expect = 2e-09
Identities = 35/100 (35%), Positives = 46/100 (46%), Gaps = 10/100 (10%)
Frame = +2
Query: 146 VCYKCNRTGHFARECTQ---------GGVGARDAGF-NRQREKCFKCNRTGHFARDCKEE 295
VCY C + GH +RECT+ GG G AGF N F G F +
Sbjct: 184 VCYNCQQPGHTSRECTEERKPREGRTGGFGG-GAGFGNNGGNDGF--GGDGGFGGGEERG 240
Query: 296 ADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCP 415
+C+ C G GH + EC + P C+NC + GH + CP
Sbjct: 241 PMKCFNCKGEGHRSAECPEPP--RGCFNCGEQGHRSNECP 278
Score = 53.2 bits (122), Expect = 1e-07
Identities = 37/135 (27%), Positives = 54/135 (40%), Gaps = 17/135 (12%)
Frame = +2
Query: 149 CYKCNRTGHFARECTQGGVGARDAGFNRQREKCFKCNRTGHFARDCKEEAD-RCYRCNGT 325
C+ C + GH + +C + R+ C+ C + GH +R+C EE R R G
Sbjct: 160 CFNCQQPGHRSSDCPEPRK-------EREPRVCYNCQQPGHTSRECTEERKPREGRTGGF 212
Query: 326 GHIARECAQSPDEP----------------SCYNCNKTGHIARNCPEGGRDNSNQTCYNC 457
G A ++ C+NC GH + CPE R C+NC
Sbjct: 213 GGGAGFGNNGGNDGFGGDGGFGGGEERGPMKCFNCKGEGHRSAECPEPPRG-----CFNC 267
Query: 458 NKSGHISRNCPDGTK 502
+ GH S CP+ K
Sbjct: 268 GEQGHRSNECPNPAK 282
Score = 51.6 bits (118), Expect = 4e-07
Identities = 24/52 (46%), Positives = 31/52 (59%), Gaps = 5/52 (9%)
Frame = +2
Query: 419 GGRDNSNQTCYNCNKSGHISRNCPDGTK-----TLYVCGKPGHISRDCDEER 559
GG N+N C+NC + GH S +CP+ K Y C +PGH SR+C EER
Sbjct: 153 GGERNNN--CFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEER 202
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 68.5 bits (160), Expect = 4e-12
Identities = 40/133 (30%), Positives = 52/133 (39%), Gaps = 17/133 (12%)
Frame = +2
Query: 200 GVGARDAGFNRQREKCFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQS--P 358
G G G + CF C + GH + DC KE R CY C GH +REC + P
Sbjct: 145 GFGEGGHGGGERNNNCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEERKP 204
Query: 359 DEPSCYNCNKTGHIARNCPE----------GGRDNSNQTCYNCNKSGHISRNCPDGTKTL 508
E N GG + C+NC GH S CP+ +
Sbjct: 205 REGRTGGFGGGAGFGNNGGNDGFGGDGGFGGGEERGPMKCFNCKGEGHRSAECPEPPRGC 264
Query: 509 YVCGKPGHISRDC 547
+ CG+ GH S +C
Sbjct: 265 FNCGEQGHRSNEC 277
Score = 59.3 bits (137), Expect = 2e-09
Identities = 35/100 (35%), Positives = 46/100 (46%), Gaps = 10/100 (10%)
Frame = +2
Query: 146 VCYKCNRTGHFARECTQ---------GGVGARDAGF-NRQREKCFKCNRTGHFARDCKEE 295
VCY C + GH +RECT+ GG G AGF N F G F +
Sbjct: 184 VCYNCQQPGHTSRECTEERKPREGRTGGFGG-GAGFGNNGGNDGF--GGDGGFGGGEERG 240
Query: 296 ADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCP 415
+C+ C G GH + EC + P C+NC + GH + CP
Sbjct: 241 PMKCFNCKGEGHRSAECPEPP--RGCFNCGEQGHRSNECP 278
Score = 53.2 bits (122), Expect = 1e-07
Identities = 37/135 (27%), Positives = 54/135 (40%), Gaps = 17/135 (12%)
Frame = +2
Query: 149 CYKCNRTGHFARECTQGGVGARDAGFNRQREKCFKCNRTGHFARDCKEEAD-RCYRCNGT 325
C+ C + GH + +C + R+ C+ C + GH +R+C EE R R G
Sbjct: 160 CFNCQQPGHRSSDCPEPRK-------EREPRVCYNCQQPGHTSRECTEERKPREGRTGGF 212
Query: 326 GHIARECAQSPDEP----------------SCYNCNKTGHIARNCPEGGRDNSNQTCYNC 457
G A ++ C+NC GH + CPE R C+NC
Sbjct: 213 GGGAGFGNNGGNDGFGGDGGFGGGEERGPMKCFNCKGEGHRSAECPEPPRG-----CFNC 267
Query: 458 NKSGHISRNCPDGTK 502
+ GH S CP+ K
Sbjct: 268 GEQGHRSNECPNPAK 282
Score = 51.6 bits (118), Expect = 4e-07
Identities = 24/52 (46%), Positives = 31/52 (59%), Gaps = 5/52 (9%)
Frame = +2
Query: 419 GGRDNSNQTCYNCNKSGHISRNCPDGTK-----TLYVCGKPGHISRDCDEER 559
GG N+N C+NC + GH S +CP+ K Y C +PGH SR+C EER
Sbjct: 153 GGERNNN--CFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEER 202
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 68.5 bits (160), Expect = 4e-12
Identities = 40/133 (30%), Positives = 52/133 (39%), Gaps = 17/133 (12%)
Frame = +2
Query: 200 GVGARDAGFNRQREKCFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQS--P 358
G G G + CF C + GH + DC KE R CY C GH +REC + P
Sbjct: 145 GFGEGGHGGGERNNNCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEERKP 204
Query: 359 DEPSCYNCNKTGHIARNCPE----------GGRDNSNQTCYNCNKSGHISRNCPDGTKTL 508
E N GG + C+NC GH S CP+ +
Sbjct: 205 REGRTGGFGGGAGFGNNGGNDGFGGDGGFGGGEERGPMKCFNCKGEGHRSAECPEPPRGC 264
Query: 509 YVCGKPGHISRDC 547
+ CG+ GH S +C
Sbjct: 265 FNCGEQGHRSNEC 277
Score = 59.3 bits (137), Expect = 2e-09
Identities = 35/100 (35%), Positives = 46/100 (46%), Gaps = 10/100 (10%)
Frame = +2
Query: 146 VCYKCNRTGHFARECTQ---------GGVGARDAGF-NRQREKCFKCNRTGHFARDCKEE 295
VCY C + GH +RECT+ GG G AGF N F G F +
Sbjct: 184 VCYNCQQPGHTSRECTEERKPREGRTGGFGG-GAGFGNNGGNDGF--GGDGGFGGGEERG 240
Query: 296 ADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCP 415
+C+ C G GH + EC + P C+NC + GH + CP
Sbjct: 241 PMKCFNCKGEGHRSAECPEPP--RGCFNCGEQGHRSNECP 278
Score = 53.2 bits (122), Expect = 1e-07
Identities = 37/135 (27%), Positives = 54/135 (40%), Gaps = 17/135 (12%)
Frame = +2
Query: 149 CYKCNRTGHFARECTQGGVGARDAGFNRQREKCFKCNRTGHFARDCKEEAD-RCYRCNGT 325
C+ C + GH + +C + R+ C+ C + GH +R+C EE R R G
Sbjct: 160 CFNCQQPGHRSSDCPEPRK-------EREPRVCYNCQQPGHTSRECTEERKPREGRTGGF 212
Query: 326 GHIARECAQSPDEP----------------SCYNCNKTGHIARNCPEGGRDNSNQTCYNC 457
G A ++ C+NC GH + CPE R C+NC
Sbjct: 213 GGGAGFGNNGGNDGFGGDGGFGGGEERGPMKCFNCKGEGHRSAECPEPPRG-----CFNC 267
Query: 458 NKSGHISRNCPDGTK 502
+ GH S CP+ K
Sbjct: 268 GEQGHRSNECPNPAK 282
Score = 51.6 bits (118), Expect = 4e-07
Identities = 24/52 (46%), Positives = 31/52 (59%), Gaps = 5/52 (9%)
Frame = +2
Query: 419 GGRDNSNQTCYNCNKSGHISRNCPDGTK-----TLYVCGKPGHISRDCDEER 559
GG N+N C+NC + GH S +CP+ K Y C +PGH SR+C EER
Sbjct: 153 GGERNNN--CFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEER 202
>U80837-3|AAB37904.2| 384|Caenorhabditis elegans Hypothetical
protein F07E5.5 protein.
Length = 384
Score = 61.7 bits (143), Expect = 4e-10
Identities = 32/107 (29%), Positives = 48/107 (44%), Gaps = 11/107 (10%)
Frame = +2
Query: 131 KMSSSVCYKCNRTGHFARECTQGGVGARDAGFNRQREKCFKCNRTGHFARDCKEEADR-- 304
K++ S C+ C GH +C + + D CFKC H +CK++ +
Sbjct: 225 KITGSACFHCREPGHRLADCPKRNSSSSDG-------VCFKCGSMEHSIHECKKKGVKGF 277
Query: 305 ----CYRCNGTGHIARECAQS-----PDEPSCYNCNKTGHIARNCPE 418
C+ C GHI+R+C Q+ PD C C H+ R+CPE
Sbjct: 278 PYATCFVCKQVGHISRDCHQNVNGVYPDGGCCNVCGANTHLRRDCPE 324
Score = 60.9 bits (141), Expect = 7e-10
Identities = 39/130 (30%), Positives = 54/130 (41%), Gaps = 11/130 (8%)
Frame = +2
Query: 197 GGVGARDAGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNGTGHIARECAQ---SPDEP 367
G V DA +R K + R G +D K C+ C GH +C + S +
Sbjct: 197 GKVTVADAMLLVKRWKTRETRRIGR--QDQKITGSACFHCREPGHRLADCPKRNSSSSDG 254
Query: 368 SCYNCNKTGHIARNCPEGG-RDNSNQTCYNCNKSGHISRNCPDGTKTLY-------VCGK 523
C+ C H C + G + TC+ C + GHISR+C +Y VCG
Sbjct: 255 VCFKCGSMEHSIHECKKKGVKGFPYATCFVCKQVGHISRDCHQNVNGVYPDGGCCNVCGA 314
Query: 524 PGHISRDCDE 553
H+ RDC E
Sbjct: 315 NTHLRRDCPE 324
Score = 54.0 bits (124), Expect = 8e-08
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 6/71 (8%)
Frame = +2
Query: 368 SCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNC-PDGTK-----TLYVCGKPG 529
+C++C + GH +CP+ +S+ C+ C H C G K T +VC + G
Sbjct: 230 ACFHCREPGHRLADCPKRNSSSSDGVCFKCGSMEHSIHECKKKGVKGFPYATCFVCKQVG 289
Query: 530 HISRDCDEERN 562
HISRDC + N
Sbjct: 290 HISRDCHQNVN 300
>AF039041-1|AAP46271.1| 1067|Caenorhabditis elegans Laminin related.
see also lmb-protein 1 protein.
Length = 1067
Score = 42.7 bits (96), Expect = 2e-04
Identities = 32/111 (28%), Positives = 41/111 (36%), Gaps = 6/111 (5%)
Frame = +2
Query: 182 RECTQGGVGARDAGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNGTGHIARECAQSPD 361
R C Q +G GF K C+ G DC +++ +C C G R+C Q
Sbjct: 825 RRCDQCAIGTY--GFGPSGCKKCDCDAVGSLGNDCDKQSGQCV-CREKGIYGRQCNQCQP 881
Query: 362 E----PSCYNCNKTGHIARNCPEGGRDNSNQTCYNCN--KSGHISRNCPDG 496
P C C H A C D S+ C C +GH C DG
Sbjct: 882 GFWGFPECRTCQCNDH-ANIC-----DQSSGACIECRDLTTGHYCDRCQDG 926
>U15406-1|AAA50456.1| 2272|Caenorhabditis elegans gag, pol and env
protein precursor protein.
Length = 2272
Score = 41.1 bits (92), Expect = 6e-04
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 5/73 (6%)
Frame = +2
Query: 239 EKCFKCNRTG-HF---ARDCKEEAD-RCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIA 403
++C C + G H ++ K+ A +C C +G C + + +C+ CN+ GHIA
Sbjct: 629 DRCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASCFKLKNR-ACFRCNEMGHIA 687
Query: 404 RNCPEGGRDNSNQ 442
NCP+ + S +
Sbjct: 688 WNCPKKNENTSEK 700
Score = 40.7 bits (91), Expect = 8e-04
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Frame = +2
Query: 296 ADRCYRCNGTGHIARECAQ-SPDEPS--CYNCNKTGHIARNCPEGGRDNSNQTCYNCNKS 466
+DRC C G C++ S D S C C ++G +C + N+ C+ CN+
Sbjct: 628 SDRCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASCFK----LKNRACFRCNEM 683
Query: 467 GHISRNCP 490
GHI+ NCP
Sbjct: 684 GHIAWNCP 691
Score = 31.1 bits (67), Expect = 0.67
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +2
Query: 185 ECTQGGVGARDAGFNRQREKCFKCNRTGHFARDCKEE 295
EC Q G F + CF+CN GH A +C ++
Sbjct: 658 ECQQSGWHMASC-FKLKNRACFRCNEMGHIAWNCPKK 693
Score = 27.9 bits (59), Expect = 6.3
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +2
Query: 131 KMSSSVCYKCNRTGHFAREC 190
K+ + C++CN GH A C
Sbjct: 671 KLKNRACFRCNEMGHIAWNC 690
>L23646-13|AAA28035.2| 2175|Caenorhabditis elegans C. elegans RETR-1
protein, isoforma protein.
Length = 2175
Score = 41.1 bits (92), Expect = 6e-04
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 5/73 (6%)
Frame = +2
Query: 239 EKCFKCNRTG-HF---ARDCKEEAD-RCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIA 403
++C C + G H ++ K+ A +C C +G C + + +C+ CN+ GHIA
Sbjct: 532 DRCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASCFKLKNR-ACFRCNEMGHIA 590
Query: 404 RNCPEGGRDNSNQ 442
NCP+ + S +
Sbjct: 591 WNCPKKNENTSEK 603
Score = 40.7 bits (91), Expect = 8e-04
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Frame = +2
Query: 296 ADRCYRCNGTGHIARECAQ-SPDEPS--CYNCNKTGHIARNCPEGGRDNSNQTCYNCNKS 466
+DRC C G C++ S D S C C ++G +C + N+ C+ CN+
Sbjct: 531 SDRCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASCFK----LKNRACFRCNEM 586
Query: 467 GHISRNCP 490
GHI+ NCP
Sbjct: 587 GHIAWNCP 594
Score = 31.1 bits (67), Expect = 0.67
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +2
Query: 185 ECTQGGVGARDAGFNRQREKCFKCNRTGHFARDCKEE 295
EC Q G F + CF+CN GH A +C ++
Sbjct: 561 ECQQSGWHMASC-FKLKNRACFRCNEMGHIAWNCPKK 596
Score = 27.9 bits (59), Expect = 6.3
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +2
Query: 131 KMSSSVCYKCNRTGHFAREC 190
K+ + C++CN GH A C
Sbjct: 574 KLKNRACFRCNEMGHIAWNC 593
>L23646-12|AAL02516.1| 2186|Caenorhabditis elegans C. elegans RETR-1
protein, isoformb protein.
Length = 2186
Score = 41.1 bits (92), Expect = 6e-04
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 5/73 (6%)
Frame = +2
Query: 239 EKCFKCNRTG-HF---ARDCKEEAD-RCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIA 403
++C C + G H ++ K+ A +C C +G C + + +C+ CN+ GHIA
Sbjct: 543 DRCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASCFKLKNR-ACFRCNEMGHIA 601
Query: 404 RNCPEGGRDNSNQ 442
NCP+ + S +
Sbjct: 602 WNCPKKNENTSEK 614
Score = 40.7 bits (91), Expect = 8e-04
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Frame = +2
Query: 296 ADRCYRCNGTGHIARECAQ-SPDEPS--CYNCNKTGHIARNCPEGGRDNSNQTCYNCNKS 466
+DRC C G C++ S D S C C ++G +C + N+ C+ CN+
Sbjct: 542 SDRCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASCFK----LKNRACFRCNEM 597
Query: 467 GHISRNCP 490
GHI+ NCP
Sbjct: 598 GHIAWNCP 605
Score = 31.1 bits (67), Expect = 0.67
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +2
Query: 185 ECTQGGVGARDAGFNRQREKCFKCNRTGHFARDCKEE 295
EC Q G F + CF+CN GH A +C ++
Sbjct: 572 ECQQSGWHMASC-FKLKNRACFRCNEMGHIAWNCPKK 607
Score = 27.9 bits (59), Expect = 6.3
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +2
Query: 131 KMSSSVCYKCNRTGHFAREC 190
K+ + C++CN GH A C
Sbjct: 585 KLKNRACFRCNEMGHIAWNC 604
>Z81494-3|CAB61009.1| 196|Caenorhabditis elegans Hypothetical
protein F02E9.2b protein.
Length = 196
Score = 39.9 bits (89), Expect = 0.001
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
Frame = +2
Query: 413 PEGGRDNSNQTCYNCNK-SGHISRNCPD---GTKTLYVCGKPGHISRDCDEERN*HAP 574
P G + + C+ C K + H +++CP+ K Y CG H+S C E R H P
Sbjct: 102 PLGRKKAVSLRCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRRKHRP 159
Score = 35.1 bits (77), Expect = 0.041
Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 2/44 (4%)
Frame = +2
Query: 302 RCYRCNGTG-HIARECAQ-SPDEPSCYNCNKTGHIARNCPEGGR 427
RC+RC H A+ C D CY C H++ CPE R
Sbjct: 112 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRR 155
Score = 31.9 bits (69), Expect = 0.39
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 7/60 (11%)
Frame = +2
Query: 194 QGGVGARDAGFNRQRE---KCFKCNRTG-HFARDC---KEEADRCYRCNGTGHIARECAQ 352
QG G+R R++ +CF+C + H A+ C K +A CY C H++ C +
Sbjct: 93 QGLKGSRIHPLGRKKAVSLRCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPE 152
>Z81494-2|CAB61008.1| 227|Caenorhabditis elegans Hypothetical
protein F02E9.2a protein.
Length = 227
Score = 39.9 bits (89), Expect = 0.001
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
Frame = +2
Query: 413 PEGGRDNSNQTCYNCNK-SGHISRNCPD---GTKTLYVCGKPGHISRDCDEERN*HAP 574
P G + + C+ C K + H +++CP+ K Y CG H+S C E R H P
Sbjct: 133 PLGRKKAVSLRCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRRKHRP 190
Score = 35.1 bits (77), Expect = 0.041
Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 2/44 (4%)
Frame = +2
Query: 302 RCYRCNGTG-HIARECAQ-SPDEPSCYNCNKTGHIARNCPEGGR 427
RC+RC H A+ C D CY C H++ CPE R
Sbjct: 143 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRR 186
Score = 31.9 bits (69), Expect = 0.39
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 7/60 (11%)
Frame = +2
Query: 194 QGGVGARDAGFNRQRE---KCFKCNRTG-HFARDC---KEEADRCYRCNGTGHIARECAQ 352
QG G+R R++ +CF+C + H A+ C K +A CY C H++ C +
Sbjct: 124 QGLKGSRIHPLGRKKAVSLRCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPE 183
>U75915-1|AAB49759.1| 227|Caenorhabditis elegans Lin-28 protein.
Length = 227
Score = 39.9 bits (89), Expect = 0.001
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
Frame = +2
Query: 413 PEGGRDNSNQTCYNCNK-SGHISRNCPD---GTKTLYVCGKPGHISRDCDEERN*HAP 574
P G + + C+ C K + H +++CP+ K Y CG H+S C E R H P
Sbjct: 133 PLGRKKAVSLRCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRRKHRP 190
Score = 35.1 bits (77), Expect = 0.041
Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 2/44 (4%)
Frame = +2
Query: 302 RCYRCNGTG-HIARECAQ-SPDEPSCYNCNKTGHIARNCPEGGR 427
RC+RC H A+ C D CY C H++ CPE R
Sbjct: 143 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRR 186
Score = 31.9 bits (69), Expect = 0.39
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 7/60 (11%)
Frame = +2
Query: 194 QGGVGARDAGFNRQRE---KCFKCNRTG-HFARDC---KEEADRCYRCNGTGHIARECAQ 352
QG G+R R++ +CF+C + H A+ C K +A CY C H++ C +
Sbjct: 124 QGLKGSRIHPLGRKKAVSLRCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPE 183
>U75912-1|AAC47476.1| 227|Caenorhabditis elegans LIN-28 protein.
Length = 227
Score = 39.9 bits (89), Expect = 0.001
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
Frame = +2
Query: 413 PEGGRDNSNQTCYNCNK-SGHISRNCPD---GTKTLYVCGKPGHISRDCDEERN*HAP 574
P G + + C+ C K + H +++CP+ K Y CG H+S C E R H P
Sbjct: 133 PLGRKKAVSLRCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRRKHRP 190
Score = 35.1 bits (77), Expect = 0.041
Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 2/44 (4%)
Frame = +2
Query: 302 RCYRCNGTG-HIARECAQ-SPDEPSCYNCNKTGHIARNCPEGGR 427
RC+RC H A+ C D CY C H++ CPE R
Sbjct: 143 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRR 186
Score = 31.9 bits (69), Expect = 0.39
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 7/60 (11%)
Frame = +2
Query: 194 QGGVGARDAGFNRQRE---KCFKCNRTG-HFARDC---KEEADRCYRCNGTGHIARECAQ 352
QG G+R R++ +CF+C + H A+ C K +A CY C H++ C +
Sbjct: 124 QGLKGSRIHPLGRKKAVSLRCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPE 183
>Z68297-6|CAE45045.1| 302|Caenorhabditis elegans Hypothetical
protein F11A10.8 protein.
Length = 302
Score = 39.5 bits (88), Expect = 0.002
Identities = 24/95 (25%), Positives = 39/95 (41%), Gaps = 1/95 (1%)
Frame = +2
Query: 275 ARDCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRDNSNQTCYN 454
A+ +A C+ C+ GH A C P + N + + + ++ S+ TCY
Sbjct: 196 AKPTYSQAITCHNCHERGHKATTCPHLPGQTR-QNQDHHHRVDLSLIPDKKNLSDVTCYK 254
Query: 455 CNKSGHISRNCPDGTKT-LYVCGKPGHISRDCDEE 556
C + GH + C G L H R+ DE+
Sbjct: 255 CGEKGHYANRCHKGALAFLSNTAHLAHEQREKDEK 289
Score = 31.9 bits (69), Expect = 0.39
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +2
Query: 134 MSSSVCYKCNRTGHFARECTQGGV 205
+S CYKC GH+A C +G +
Sbjct: 247 LSDVTCYKCGEKGHYANRCHKGAL 270
Score = 28.7 bits (61), Expect = 3.6
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +2
Query: 245 CFKCNRTGHFARDCKEEADRCYRCNGTGHIARE 343
C+KC GH+A C + A + N T H+A E
Sbjct: 252 CYKCGEKGHYANRCHKGA-LAFLSN-TAHLAHE 282
>AC006672-5|AAM98003.1| 42|Caenorhabditis elegans Hypothetical
protein K08D12.3b protein.
Length = 42
Score = 39.1 bits (87), Expect = 0.003
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +2
Query: 434 SNQTCYNCNKSGHISRNCPDG 496
S++ CY C + GHISRNCP+G
Sbjct: 2 SDRNCYKCQQPGHISRNCPNG 22
Score = 37.1 bits (82), Expect = 0.010
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +2
Query: 368 SCYNCNKTGHIARNCPEGGRDNSNQ 442
+CY C + GHI+RNCP G D +
Sbjct: 5 NCYKCQQPGHISRNCPNGESDGGRR 29
Score = 32.3 bits (70), Expect = 0.29
Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Frame = +2
Query: 134 MSSSVCYKCNRTGHFARECTQG-GVGARDAG 223
MS CYKC + GH +R C G G R G
Sbjct: 1 MSDRNCYKCQQPGHISRNCPNGESDGGRRGG 31
Score = 29.1 bits (62), Expect = 2.7
Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +2
Query: 245 CFKCNRTGHFARDCKE-EADRCYRCNGTGHI 334
C+KC + GH +R+C E+D R G G +
Sbjct: 6 CYKCQQPGHISRNCPNGESDGGRRGGGGGGV 36
Score = 27.5 bits (58), Expect = 8.3
Identities = 10/18 (55%), Positives = 13/18 (72%), Gaps = 1/18 (5%)
Frame = +2
Query: 296 ADR-CYRCNGTGHIAREC 346
+DR CY+C GHI+R C
Sbjct: 2 SDRNCYKCQQPGHISRNC 19
Score = 27.5 bits (58), Expect = 8.3
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +2
Query: 500 KTLYVCGKPGHISRDC 547
+ Y C +PGHISR+C
Sbjct: 4 RNCYKCQQPGHISRNC 19
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 38.3 bits (85), Expect = 0.004
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +2
Query: 371 CYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNC 487
C NC H + CP+ + C NC GHIS++C
Sbjct: 430 CSNCGSDEHKSWECPDAPNVTNQIKCTNCGAFGHISKDC 468
Score = 35.9 bits (79), Expect = 0.024
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 5/57 (8%)
Frame = +2
Query: 266 GHFARDCKEEADRCYRCNGTGHIARECAQSP---DEPSCYNCNKTGHIARNC--PEG 421
G F + RC C H + EC +P ++ C NC GHI+++C P+G
Sbjct: 417 GTFRPEDLANGARCSNCGSDEHKSWECPDAPNVTNQIKCTNCGAFGHISKDCKNPKG 473
Score = 33.9 bits (74), Expect = 0.096
Identities = 17/47 (36%), Positives = 20/47 (42%), Gaps = 5/47 (10%)
Frame = +2
Query: 446 CYNCNKSGHISRNCPDGTKTLYV-----CGKPGHISRDCDEERN*HA 571
C NC H S CPD CG GHIS+DC + +A
Sbjct: 430 CSNCGSDEHKSWECPDAPNVTNQIKCTNCGAFGHISKDCKNPKGMYA 476
Score = 27.9 bits (59), Expect = 6.3
Identities = 15/47 (31%), Positives = 19/47 (40%)
Frame = +2
Query: 149 CYKCNRTGHFARECTQGGVGARDAGFNRQREKCFKCNRTGHFARDCK 289
C C H + EC DA + KC C GH ++DCK
Sbjct: 430 CSNCGSDEHKSWECP-------DAPNVTNQIKCTNCGAFGHISKDCK 469
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 38.3 bits (85), Expect = 0.004
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +2
Query: 371 CYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNC 487
C NC H + CP+ + C NC GHIS++C
Sbjct: 430 CSNCGSDEHKSWECPDAPNVTNQIKCTNCGAFGHISKDC 468
Score = 35.9 bits (79), Expect = 0.024
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 5/57 (8%)
Frame = +2
Query: 266 GHFARDCKEEADRCYRCNGTGHIARECAQSP---DEPSCYNCNKTGHIARNC--PEG 421
G F + RC C H + EC +P ++ C NC GHI+++C P+G
Sbjct: 417 GTFRPEDLANGARCSNCGSDEHKSWECPDAPNVTNQIKCTNCGAFGHISKDCKNPKG 473
Score = 33.9 bits (74), Expect = 0.096
Identities = 17/47 (36%), Positives = 20/47 (42%), Gaps = 5/47 (10%)
Frame = +2
Query: 446 CYNCNKSGHISRNCPDGTKTLYV-----CGKPGHISRDCDEERN*HA 571
C NC H S CPD CG GHIS+DC + +A
Sbjct: 430 CSNCGSDEHKSWECPDAPNVTNQIKCTNCGAFGHISKDCKNPKGMYA 476
Score = 27.9 bits (59), Expect = 6.3
Identities = 15/47 (31%), Positives = 19/47 (40%)
Frame = +2
Query: 149 CYKCNRTGHFARECTQGGVGARDAGFNRQREKCFKCNRTGHFARDCK 289
C C H + EC DA + KC C GH ++DCK
Sbjct: 430 CSNCGSDEHKSWECP-------DAPNVTNQIKCTNCGAFGHISKDCK 469
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 38.3 bits (85), Expect = 0.004
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = +2
Query: 245 CFKCNRTGHFARDCKEEADRCYRCNGTGHIARECA 349
CF C + GH A +C C C H A ECA
Sbjct: 204 CFNCKKYGHRATECSAPQRECANCGDPNHRANECA 238
Score = 37.5 bits (83), Expect = 0.008
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +2
Query: 437 NQTCYNCNKSGHISRNCPDGTKTLYVCGKPGHISRDC 547
+ TC+NC K GH + C + CG P H + +C
Sbjct: 201 SNTCFNCKKYGHRATECSAPQRECANCGDPNHRANEC 237
Score = 33.9 bits (74), Expect = 0.096
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = +2
Query: 368 SCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNCPDGTK 502
+C+NC K GH A C R+ C NC H + C +K
Sbjct: 203 TCFNCKKYGHRATECSAPQRE-----CANCGDPNHRANECASWSK 242
Score = 33.5 bits (73), Expect = 0.13
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = +2
Query: 296 ADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNC 412
++ C+ C GH A EC S + C NC H A C
Sbjct: 201 SNTCFNCKKYGHRATEC--SAPQRECANCGDPNHRANEC 237
Score = 27.5 bits (58), Expect = 8.3
Identities = 12/44 (27%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = +2
Query: 140 SSVCYKCNRTGHFARECTQGGVGARDAGF-NRQREKCFKCNRTG 268
S+ C+ C + GH A EC+ + G N + +C ++ G
Sbjct: 201 SNTCFNCKKYGHRATECSAPQRECANCGDPNHRANECASWSKNG 244
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 38.3 bits (85), Expect = 0.004
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = +2
Query: 245 CFKCNRTGHFARDCKEEADRCYRCNGTGHIARECA 349
CF C + GH A +C C C H A ECA
Sbjct: 204 CFNCKKYGHRATECSAPQRECANCGDPNHRANECA 238
Score = 37.5 bits (83), Expect = 0.008
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +2
Query: 437 NQTCYNCNKSGHISRNCPDGTKTLYVCGKPGHISRDC 547
+ TC+NC K GH + C + CG P H + +C
Sbjct: 201 SNTCFNCKKYGHRATECSAPQRECANCGDPNHRANEC 237
Score = 33.9 bits (74), Expect = 0.096
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = +2
Query: 368 SCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNCPDGTK 502
+C+NC K GH A C R+ C NC H + C +K
Sbjct: 203 TCFNCKKYGHRATECSAPQRE-----CANCGDPNHRANECASWSK 242
Score = 33.5 bits (73), Expect = 0.13
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = +2
Query: 296 ADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNC 412
++ C+ C GH A EC S + C NC H A C
Sbjct: 201 SNTCFNCKKYGHRATEC--SAPQRECANCGDPNHRANEC 237
Score = 27.5 bits (58), Expect = 8.3
Identities = 12/44 (27%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = +2
Query: 140 SSVCYKCNRTGHFARECTQGGVGARDAGF-NRQREKCFKCNRTG 268
S+ C+ C + GH A EC+ + G N + +C ++ G
Sbjct: 201 SNTCFNCKKYGHRATECSAPQRECANCGDPNHRANECASWSKNG 244
>AF016670-8|AAB66101.1| 783|Caenorhabditis elegans Hypothetical
protein K02F6.1 protein.
Length = 783
Score = 34.7 bits (76), Expect = 0.055
Identities = 17/55 (30%), Positives = 22/55 (40%)
Frame = +2
Query: 305 CYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSG 469
CY+C GH++++C QS N KT H N E G N G
Sbjct: 313 CYKCKVVGHVSKDCPQSSTNSGVTN-RKTEHSEVNTLEVGSGRQTSPSLRLNVEG 366
Score = 31.5 bits (68), Expect = 0.51
Identities = 8/23 (34%), Positives = 15/23 (65%)
Frame = +2
Query: 365 PSCYNCNKTGHIARNCPEGGRDN 433
P CY C GH++++CP+ ++
Sbjct: 311 PYCYKCKVVGHVSKDCPQSSTNS 333
Score = 29.1 bits (62), Expect = 2.7
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +2
Query: 446 CYNCNKSGHISRNCPDGT 499
CY C GH+S++CP +
Sbjct: 313 CYKCKVVGHVSKDCPQSS 330
Score = 27.9 bits (59), Expect = 6.3
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = +2
Query: 149 CYKCNRTGHFARECTQGGVGA 211
CYKC GH +++C Q +
Sbjct: 313 CYKCKVVGHVSKDCPQSSTNS 333
>U21322-3|AAA62541.1| 1425|Caenorhabditis elegans Hypothetical protein
K10D2.3 protein.
Length = 1425
Score = 33.9 bits (74), Expect = 0.096
Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 11/66 (16%)
Frame = +2
Query: 332 IARECAQ--SPDEPSCYNCNKTGHIARNCPEGG---------RDNSNQTCYNCNKSGHIS 478
+ R+C Q +P + C+ C++ GH +CP+ NS + Y N SG
Sbjct: 1342 LLRKCNQGSAPTDRQCHQCHRIGHFVESCPQRALAKEARKRFGSNSTNSSYRSNDSGRGF 1401
Query: 479 RNCPDG 496
+N +G
Sbjct: 1402 KNGEEG 1407
Score = 32.3 bits (70), Expect = 0.29
Identities = 15/54 (27%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = +2
Query: 149 CYKCNRTGHFARECTQGGVG--ARDAGFNRQREKCFKCNRTGHFARDCKEEADR 304
C++C+R GHF C Q + AR + ++ N +G ++ +E DR
Sbjct: 1357 CHQCHRIGHFVESCPQRALAKEARKRFGSNSTNSSYRSNDSGRGFKNGEEGGDR 1410
Score = 31.5 bits (68), Expect = 0.51
Identities = 26/81 (32%), Positives = 34/81 (41%)
Frame = +2
Query: 182 RECTQGGVGARDAGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNGTGHIARECAQSPD 361
R+C QG A +RQ C +C+R GHF C + A AR+ S
Sbjct: 1344 RKCNQGS-----APTDRQ---CHQCHRIGHFVESCPQRA--------LAKEARKRFGSNS 1387
Query: 362 EPSCYNCNKTGHIARNCPEGG 424
S Y N +G +N EGG
Sbjct: 1388 TNSSYRSNDSGRGFKNGEEGG 1408
>L12018-4|AAK68342.1| 456|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 10, isoform a
protein.
Length = 456
Score = 32.7 bits (71), Expect = 0.22
Identities = 19/60 (31%), Positives = 29/60 (48%)
Frame = +2
Query: 305 CYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRN 484
C +C+GT + + SC CN TG +++ +GG TC C SGH ++N
Sbjct: 191 CLKCHGT-----QVEPGHKKTSCPYCNGTGAVSQRL-QGGFFYQT-TCNRCRGSGHYNKN 243
>L12018-3|AAK68343.1| 446|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 10, isoform b
protein.
Length = 446
Score = 32.7 bits (71), Expect = 0.22
Identities = 19/60 (31%), Positives = 29/60 (48%)
Frame = +2
Query: 305 CYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRN 484
C +C+GT + + SC CN TG +++ +GG TC C SGH ++N
Sbjct: 191 CLKCHGT-----QVEPGHKKTSCPYCNGTGAVSQRL-QGGFFYQT-TCNRCRGSGHYNKN 243
>AF025471-8|AAB71060.1| 1019|Caenorhabditis elegans Hypothetical
protein R52.2 protein.
Length = 1019
Score = 32.7 bits (71), Expect = 0.22
Identities = 20/65 (30%), Positives = 24/65 (36%), Gaps = 2/65 (3%)
Frame = +2
Query: 143 SVCYKCNRTGHFARECTQGGVGARDAGFNRQRE--KCFKCNRTGHFARDCKEEADRCYRC 316
S C C+ T H R +A + RE CF C R+GH C C C
Sbjct: 312 SPCIFCSSTSHVHRHEECPIFNTAEARIQKAREIGLCFGCLRSGHQRSKCSRPR-TCNHC 370
Query: 317 NGTGH 331
G H
Sbjct: 371 KGNHH 375
>Z99270-3|CAL64001.1| 98|Caenorhabditis elegans Hypothetical
protein Y37A1A.4 protein.
Length = 98
Score = 31.1 bits (67), Expect = 0.67
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = +1
Query: 466 RAHLAQLPRRHQDFVRLRQARTYLSRLRRGAELTR-AQQLLLFYYKPKIN 612
R+H++ RRH V+ A + +LRRG L Q + FY +P N
Sbjct: 7 RSHISPTLRRHSSNVKTYDAIQFRDKLRRGVSLENIGPQRVCFYPQPTRN 56
>Z92828-7|CAE48500.1| 700|Caenorhabditis elegans Hypothetical
protein K03D10.1 protein.
Length = 700
Score = 31.1 bits (67), Expect = 0.67
Identities = 25/94 (26%), Positives = 38/94 (40%), Gaps = 1/94 (1%)
Frame = +2
Query: 284 CKEEADRCYRCNGTGHIARECAQSPDEPSCYN-CNKTGHIARNCPEGGRDNSNQTCYNCN 460
C+E+ D C + C S D +C + C+ I + P SNQ+ Y C+
Sbjct: 66 CREQFDDIKACK------KSCVASDDRETCEDSCHYLQRIYQEKPGACPSVSNQSNYECS 119
Query: 461 KSGHISRNCPDGTKTLYVCGKPGHISRDCDEERN 562
+ CP+ K C G SR C + R+
Sbjct: 120 ALCQMDGECPETQK----CCSSG-CSRQCLKPRS 148
>Z82258-5|CAL63989.1| 98|Caenorhabditis elegans Hypothetical
protein Y37A1A.4 protein.
Length = 98
Score = 31.1 bits (67), Expect = 0.67
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = +1
Query: 466 RAHLAQLPRRHQDFVRLRQARTYLSRLRRGAELTR-AQQLLLFYYKPKIN 612
R+H++ RRH V+ A + +LRRG L Q + FY +P N
Sbjct: 7 RSHISPTLRRHSSNVKTYDAIQFRDKLRRGVSLENIGPQRVCFYPQPTRN 56
>Z81561-2|CAB04551.2| 700|Caenorhabditis elegans Hypothetical
protein K03D10.1 protein.
Length = 700
Score = 31.1 bits (67), Expect = 0.67
Identities = 25/94 (26%), Positives = 38/94 (40%), Gaps = 1/94 (1%)
Frame = +2
Query: 284 CKEEADRCYRCNGTGHIARECAQSPDEPSCYN-CNKTGHIARNCPEGGRDNSNQTCYNCN 460
C+E+ D C + C S D +C + C+ I + P SNQ+ Y C+
Sbjct: 66 CREQFDDIKACK------KSCVASDDRETCEDSCHYLQRIYQEKPGACPSVSNQSNYECS 119
Query: 461 KSGHISRNCPDGTKTLYVCGKPGHISRDCDEERN 562
+ CP+ K C G SR C + R+
Sbjct: 120 ALCQMDGECPETQK----CCSSG-CSRQCLKPRS 148
>Z54236-5|CAA90980.1| 386|Caenorhabditis elegans Hypothetical
protein C27B7.5 protein.
Length = 386
Score = 30.7 bits (66), Expect = 0.89
Identities = 15/46 (32%), Positives = 20/46 (43%)
Frame = +2
Query: 353 SPDEPSCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNCP 490
SP + +K R GR C++C + GHISR CP
Sbjct: 140 SPRSDGMGSSSKRPRSGRRTGRRGRGGPGH-CFHCQEHGHISRMCP 184
Score = 28.3 bits (60), Expect = 4.8
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +2
Query: 371 CYNCNKTGHIARNCPE 418
C++C + GHI+R CP+
Sbjct: 170 CFHCQEHGHISRMCPK 185
>AF077533-3|AAC64626.1| 1023|Caenorhabditis elegans Hypothetical
protein F54G2.2 protein.
Length = 1023
Score = 30.7 bits (66), Expect = 0.89
Identities = 15/49 (30%), Positives = 22/49 (44%), Gaps = 4/49 (8%)
Frame = +2
Query: 356 PDEPSCYNCNKTGHIARNC---PEGG-RDNSNQTCYNCNKSGHISRNCP 490
P+ C C + G +C P+ R+ C+ C + GHIS CP
Sbjct: 576 PENGICAECKQVGGHEPSCSLAPKTWKRERPPPQCFTCGEMGHISTYCP 624
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/55 (23%), Positives = 23/55 (41%)
Frame = +2
Query: 140 SSVCYKCNRTGHFARECTQGGVGARDAGFNRQREKCFKCNRTGHFARDCKEEADR 304
+ +C +C + G C+ + + R +CF C GH + C + DR
Sbjct: 578 NGICAECKQVGGHEPSCS---LAPKTWKRERPPPQCFTCGEMGHISTYCPKRIDR 629
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/45 (28%), Positives = 19/45 (42%), Gaps = 7/45 (15%)
Frame = +2
Query: 305 CYRCNGTGHIARECAQSPDE-------PSCYNCNKTGHIARNCPE 418
C C G C+ +P P C+ C + GHI+ CP+
Sbjct: 581 CAECKQVGGHEPSCSLAPKTWKRERPPPQCFTCGEMGHISTYCPK 625
>Z82094-3|CAB05024.1| 2561|Caenorhabditis elegans Hypothetical
protein T12D8.1 protein.
Length = 2561
Score = 29.5 bits (63), Expect = 2.1
Identities = 17/75 (22%), Positives = 29/75 (38%)
Frame = +2
Query: 239 EKCFKCNRTGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPE 418
E C NR+G + D + D C + + D C C K+ H++ + +
Sbjct: 60 ENCMDVNRSGTMSLDMARQCDMSSSCGSCQRMI-----TADSRQCTTCRKSYHLSCDSSD 114
Query: 419 GGRDNSNQTCYNCNK 463
N N C +C +
Sbjct: 115 VSSLN-NFVCISCRR 128
>Z81120-8|CAB03348.1| 2561|Caenorhabditis elegans Hypothetical
protein T12D8.1 protein.
Length = 2561
Score = 29.5 bits (63), Expect = 2.1
Identities = 17/75 (22%), Positives = 29/75 (38%)
Frame = +2
Query: 239 EKCFKCNRTGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPE 418
E C NR+G + D + D C + + D C C K+ H++ + +
Sbjct: 60 ENCMDVNRSGTMSLDMARQCDMSSSCGSCQRMI-----TADSRQCTTCRKSYHLSCDSSD 114
Query: 419 GGRDNSNQTCYNCNK 463
N N C +C +
Sbjct: 115 VSSLN-NFVCISCRR 128
>U62281-1|AAD09363.1| 925|Caenorhabditis elegans lipoprotein
receptor precursor protein.
Length = 925
Score = 29.5 bits (63), Expect = 2.1
Identities = 19/75 (25%), Positives = 32/75 (42%), Gaps = 3/75 (4%)
Frame = +2
Query: 293 EADRCYRCNGTGHIARECAQSPDEPS-CYNCNKTGHIARNCPEGGRDNSNQTCYNC--NK 463
+AD + C+ G + C + E C N T + + CP G D+ ++ C C +
Sbjct: 253 QADHMHSCSAAGMYS--CGRKGSEIGVCIPMNATCNGIKECPLG--DDESKHCSECARKR 308
Query: 464 SGHISRNCPDGTKTL 508
H N P G + +
Sbjct: 309 CDHTCMNTPHGARCI 323
>AL132952-16|CAC70119.1| 107|Caenorhabditis elegans Hypothetical
protein Y51H4A.26 protein.
Length = 107
Score = 29.5 bits (63), Expect = 2.1
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 5/53 (9%)
Frame = +2
Query: 275 ARDCKEEAD-RCYRCNGTGHIARECAQSPDEPSCYNCNKTGH----IARNCPE 418
A+ C+ D + Y+ GH R+C D P Y C K G I +NCP+
Sbjct: 37 AKKCENYFDCQQYQTCIFGHCVRKCTSERDCPLGYICFKNGDGQRCIKKNCPK 89
>Z81496-9|CAB04065.1| 153|Caenorhabditis elegans Hypothetical
protein F09C6.10 protein.
Length = 153
Score = 29.1 bits (62), Expect = 2.7
Identities = 17/77 (22%), Positives = 28/77 (36%)
Frame = +2
Query: 314 CNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNCPD 493
C + E P +P C N+ + C G + T CN+ +I N
Sbjct: 36 CQSKCGVPLEIRMKPTKPGCKKWNECDDNEKQCASGPKLQIIYTNNVCNQFVNICENREY 95
Query: 494 GTKTLYVCGKPGHISRD 544
+ CG P +S++
Sbjct: 96 ANWNMQKCGIPHVVSKN 112
>Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical protein
F29D11.1 protein.
Length = 4753
Score = 29.1 bits (62), Expect = 2.7
Identities = 22/69 (31%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Frame = +2
Query: 305 CYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRDNSNQTCYN-CNKSGHISR 481
C T +CA + DE Y CN R+CPE +N+ C + K HI
Sbjct: 2805 CILLGATCDSKPDCADASDENPNY-CN-----TRSCPEDYNLCTNRRCIDSAKKCNHID- 2857
Query: 482 NCPDGTKTL 508
+C DG+ L
Sbjct: 2858 DCGDGSDEL 2866
>U20861-8|AAA62297.3| 372|Caenorhabditis elegans Hypothetical
protein C28H8.9a protein.
Length = 372
Score = 29.1 bits (62), Expect = 2.7
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = +2
Query: 290 EEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGH 397
E + C C+GT + + D SC++C ++GH
Sbjct: 252 EISTSCDFCSGTAFMNKNTKLPEDLVSCHDCGRSGH 287
>M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-related
protein protein.
Length = 4753
Score = 29.1 bits (62), Expect = 2.7
Identities = 22/69 (31%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Frame = +2
Query: 305 CYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRDNSNQTCYN-CNKSGHISR 481
C T +CA + DE Y CN R+CPE +N+ C + K HI
Sbjct: 2805 CILLGATCDSKPDCADASDENPNY-CN-----TRSCPEDYNLCTNRRCIDSAKKCNHID- 2857
Query: 482 NCPDGTKTL 508
+C DG+ L
Sbjct: 2858 DCGDGSDEL 2866
>AF342986-1|AAL73338.1| 700|Caenorhabditis elegans KAL-1 protein.
Length = 700
Score = 29.1 bits (62), Expect = 2.7
Identities = 24/94 (25%), Positives = 37/94 (39%), Gaps = 1/94 (1%)
Frame = +2
Query: 284 CKEEADRCYRCNGTGHIARECAQSPDEPSCYN-CNKTGHIARNCPEGGRDNSNQTCYNCN 460
C+E+ D C + C D +C + C+ I + P SNQ+ Y C+
Sbjct: 66 CREQFDDIKACK------KSCVPRDDRETCEDSCHYLQRIYQEKPGACPSVSNQSNYECS 119
Query: 461 KSGHISRNCPDGTKTLYVCGKPGHISRDCDEERN 562
+ CP+ K C G SR C + R+
Sbjct: 120 ALCQMDGECPETQK----CCSSG-CSRQCLKPRS 148
>AF100656-7|AAF99964.2| 615|Caenorhabditis elegans Hypothetical
protein F49F1.8 protein.
Length = 615
Score = 29.1 bits (62), Expect = 2.7
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +2
Query: 230 RQREKCFKCNRTGHFARDCKEEA 298
R + +C C GH AR+CK++A
Sbjct: 571 RFKGQCHYCKNVGHMARNCKKKA 593
Score = 29.1 bits (62), Expect = 2.7
Identities = 10/36 (27%), Positives = 14/36 (38%)
Frame = +2
Query: 149 CYKCNRTGHFARECTQGGVGARDAGFNRQREKCFKC 256
C+ C GH AR C + + G+ Q C
Sbjct: 576 CHYCKNVGHMARNCKKKAFAEKRKGYEDQARSITSC 611
>U62639-1|AAD09364.1| 925|Caenorhabditis elegans lr protein.
Length = 925
Score = 28.7 bits (61), Expect = 3.6
Identities = 19/75 (25%), Positives = 31/75 (41%), Gaps = 3/75 (4%)
Frame = +2
Query: 293 EADRCYRCNGTGHIARECAQSPDEPS-CYNCNKTGHIARNCPEGGRDNSNQTCYNC--NK 463
+AD + C+ G + C E C N T + + CP G D+ ++ C C +
Sbjct: 253 QADHMHSCSAAGMYS--CGTKGSEIGVCIPMNATCNGIKECPLG--DDESKHCSECARKR 308
Query: 464 SGHISRNCPDGTKTL 508
H N P G + +
Sbjct: 309 CDHTCMNTPHGARCI 323
>AF185706-1|AAD56241.1| 925|Caenorhabditis elegans yolk receptor
RME-2 protein.
Length = 925
Score = 28.7 bits (61), Expect = 3.6
Identities = 19/75 (25%), Positives = 31/75 (41%), Gaps = 3/75 (4%)
Frame = +2
Query: 293 EADRCYRCNGTGHIARECAQSPDEPS-CYNCNKTGHIARNCPEGGRDNSNQTCYNC--NK 463
+AD + C+ G + C E C N T + + CP G D+ ++ C C +
Sbjct: 253 QADHMHSCSAAGMYS--CGTKGSEIGVCIPMNATCNGIKECPLG--DDESKHCSECARKR 308
Query: 464 SGHISRNCPDGTKTL 508
H N P G + +
Sbjct: 309 CDHTCMNTPHGARCI 323
>AF036703-1|AAB88554.3| 925|Caenorhabditis elegans Receptor
mediated endocytosis protein2 protein.
Length = 925
Score = 28.7 bits (61), Expect = 3.6
Identities = 19/75 (25%), Positives = 31/75 (41%), Gaps = 3/75 (4%)
Frame = +2
Query: 293 EADRCYRCNGTGHIARECAQSPDEPS-CYNCNKTGHIARNCPEGGRDNSNQTCYNC--NK 463
+AD + C+ G + C E C N T + + CP G D+ ++ C C +
Sbjct: 253 QADHMHSCSAAGMYS--CGTKGSEIGVCIPMNATCNGIKECPLG--DDESKHCSECARKR 308
Query: 464 SGHISRNCPDGTKTL 508
H N P G + +
Sbjct: 309 CDHTCMNTPHGARCI 323
>AL132862-14|CAB60548.1| 541|Caenorhabditis elegans Hypothetical
protein Y73F8A.20 protein.
Length = 541
Score = 28.3 bits (60), Expect = 4.8
Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 4/37 (10%)
Frame = +1
Query: 487 PRRHQDFV----RLRQARTYLSRLRRGAELTRAQQLL 585
P+ Q F+ R+R RT +++ RR ++TR Q+LL
Sbjct: 418 PKSSQVFINAPERIRHRRTIITKKRRNTKITRKQRLL 454
>AF016439-2|AAB65897.1| 176|Caenorhabditis elegans Hypothetical
protein R02F11.1 protein.
Length = 176
Score = 28.3 bits (60), Expect = 4.8
Identities = 18/52 (34%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
Frame = +2
Query: 371 CYNCNKTGHIARN-CPEGGRDNSNQTCYNCNKSGHISRNCPDGT-KTLYVCG 520
C + N TG CP G N+N C SG + +C +G T Y CG
Sbjct: 115 CQSGNSTGPCVNQVCPTGFMCNTNNYCCPLG-SGGVLGSCVNGVCPTGYTCG 165
>Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 27.9 bits (59), Expect = 6.3
Identities = 24/113 (21%), Positives = 46/113 (40%), Gaps = 12/113 (10%)
Frame = +2
Query: 194 QGGVGARDAGFNRQREKCFKCNRTGHFARD----CKEEADRCYRCNGTGHIAREC----- 346
+GG + N + C +C + G++ +E+A R C+ G ++ C
Sbjct: 382 EGGGRCLECAHNTEGFNCERC-KDGYYRPSGLSHYREDACRTCECDPVGSVSDACVRDDQ 440
Query: 347 -AQSPDEPSCYNCNKT--GHIARNCPEGGRDNSNQTCYNCNKSGHISRNCPDG 496
A++ +P C G C G R++ CN++G ++ + DG
Sbjct: 441 SAENGQKPGDCICKPGFGGRRCERCAPGYRNHPTCEPCPCNRAGSVNFDTCDG 493
>AL031630-5|CAA20985.1| 915|Caenorhabditis elegans Hypothetical
protein Y38H6C.5 protein.
Length = 915
Score = 27.9 bits (59), Expect = 6.3
Identities = 17/75 (22%), Positives = 31/75 (41%), Gaps = 1/75 (1%)
Frame = +2
Query: 149 CYKCNRTGHFARECTQGGVGARDAGFNRQREKCFKCNRTGHFARDCKEEADRCYRCN-GT 325
CY C + GH A EC + D N +R+ + + R + D Y + T
Sbjct: 411 CYYCGKRGHTANECRR---KKSDESQNGERQDPSQSEQIAALRRQLAMQNDDPYSSDEST 467
Query: 326 GHIARECAQSPDEPS 370
++ C + ++P+
Sbjct: 468 EALSLSCQKPKEDPT 482
>AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 27.9 bits (59), Expect = 6.3
Identities = 24/113 (21%), Positives = 46/113 (40%), Gaps = 12/113 (10%)
Frame = +2
Query: 194 QGGVGARDAGFNRQREKCFKCNRTGHFARD----CKEEADRCYRCNGTGHIAREC----- 346
+GG + N + C +C + G++ +E+A R C+ G ++ C
Sbjct: 382 EGGGRCLECAHNTEGFNCERC-KDGYYRPSGLSHYREDACRTCECDPVGSVSDACVRDDQ 440
Query: 347 -AQSPDEPSCYNCNKT--GHIARNCPEGGRDNSNQTCYNCNKSGHISRNCPDG 496
A++ +P C G C G R++ CN++G ++ + DG
Sbjct: 441 SAENGQKPGDCICKPGFGGRRCERCAPGYRNHPTCEPCPCNRAGSVNFDTCDG 493
>AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3102
Score = 27.9 bits (59), Expect = 6.3
Identities = 24/113 (21%), Positives = 46/113 (40%), Gaps = 12/113 (10%)
Frame = +2
Query: 194 QGGVGARDAGFNRQREKCFKCNRTGHFARD----CKEEADRCYRCNGTGHIAREC----- 346
+GG + N + C +C + G++ +E+A R C+ G ++ C
Sbjct: 382 EGGGRCLECAHNTEGFNCERC-KDGYYRPSGLSHYREDACRTCECDPVGSVSDACVRDDQ 440
Query: 347 -AQSPDEPSCYNCNKT--GHIARNCPEGGRDNSNQTCYNCNKSGHISRNCPDG 496
A++ +P C G C G R++ CN++G ++ + DG
Sbjct: 441 SAENGQKPGDCICKPGFGGRRCERCAPGYRNHPTCEPCPCNRAGSVNFDTCDG 493
>Z54281-2|CAA91045.3| 399|Caenorhabditis elegans Hypothetical
protein F46C5.3 protein.
Length = 399
Score = 27.5 bits (58), Expect = 8.3
Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Frame = +2
Query: 371 CYN-CNKTGHIARNCPEGGRDNSNQTCYNCN 460
CY+ C G +A NC GG N N C CN
Sbjct: 236 CYDSCRNAGQLA-NCANGGIPNPN-NCQVCN 264
>U00035-3|AAA50645.1| 548|Caenorhabditis elegans Egg sterile
(unfertilizable) protein2 protein.
Length = 548
Score = 27.5 bits (58), Expect = 8.3
Identities = 21/73 (28%), Positives = 29/73 (39%)
Frame = +2
Query: 281 DCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRDNSNQTCYNCN 460
DC+ E+D CN A +C ++ C +K +C +G D C C
Sbjct: 241 DCENESDES-NCNKCQKGAHKCGKN-----CIKASKVCDGIPDCDDGS-DEHQCDCKTC- 292
Query: 461 KSGHISRNCPDGT 499
SG C DGT
Sbjct: 293 -SGSEKALCEDGT 304
>AL132895-2|CAC14404.1| 613|Caenorhabditis elegans Hypothetical
protein Y59A8A.2 protein.
Length = 613
Score = 27.5 bits (58), Expect = 8.3
Identities = 15/56 (26%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
Frame = +2
Query: 311 RCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPE----GGRDNSNQTCYNCNKS 466
+ N T + R+ + + C C+K+ HI P R+N C+ CN+S
Sbjct: 524 KMNYTCVVCRKSTEQHKQTQCDECHKSYHIGCLSPPLTRLPKRNNFGWICHECNES 579
>AL021487-10|CAA16357.2| 1592|Caenorhabditis elegans Hypothetical
protein Y45F10B.10 protein.
Length = 1592
Score = 27.5 bits (58), Expect = 8.3
Identities = 12/32 (37%), Positives = 22/32 (68%)
Frame = -1
Query: 604 LVYNKIVRVVGRVLIPLLVAVARDMSGLAADV 509
++++ + + +VL+P LV +ARD LAA+V
Sbjct: 776 ILHHDLQVISEQVLVPALVTMARDSEQLAAEV 807
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,061,660
Number of Sequences: 27780
Number of extensions: 254982
Number of successful extensions: 1312
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 840
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1123
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1374536540
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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